Wall clock time and date at job start Sun Mar 7 2021 07:00:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37940 * 120.07561 * 2 1 4 4 C 1.38382 * 120.14278 * 179.97438 * 3 2 1 5 5 C 1.50698 * 119.85010 * 179.97438 * 4 3 2 6 6 C 1.38337 * 120.29517 * 359.97438 * 4 3 2 7 7 C 1.50690 * 119.92744 * 179.97438 * 6 4 3 8 8 O 1.42906 * 109.47294 * 75.00096 * 7 6 4 9 9 Si 1.86304 * 109.47354 * 195.00092 * 7 6 4 10 10 C 1.37979 * 120.14245 * 0.25288 * 6 4 3 11 11 C 1.39556 * 119.85444 * 359.47842 * 10 6 4 12 12 C 1.47843 * 120.14531 * 180.24328 * 11 10 6 13 13 O 1.21551 * 120.00238 * 186.25916 * 12 11 10 14 14 N 1.34781 * 119.99966 * 6.26376 * 12 11 10 15 15 C 1.46494 * 119.99910 * 179.97438 * 14 12 11 16 16 C 1.53004 * 109.47251 * 179.97438 * 15 14 12 17 17 H 1.09000 * 112.84572 * 314.67108 * 16 15 14 18 18 C 1.53781 * 113.61491 * 85.86454 * 16 15 14 19 19 C 1.53955 * 87.02029 * 139.95476 * 18 16 15 20 20 H 1.09000 * 113.53481 * 89.18676 * 19 18 16 21 21 N 1.46499 * 113.74006 * 220.05234 * 19 18 16 22 22 C 1.34953 * 126.03891 * 12.31892 * 21 19 18 23 23 C 1.35312 * 107.74410 * 179.83627 * 22 21 19 24 24 C 1.39865 * 107.92281 * 0.41655 * 23 22 21 25 25 N 1.30842 * 108.20050 * 359.74411 * 24 23 22 26 26 C 1.53778 * 87.11008 * 334.63751 * 19 18 16 27 27 H 1.09001 * 109.47149 * 96.59151 * 1 2 3 28 28 H 1.08997 * 109.47743 * 216.59524 * 1 2 3 29 29 H 1.09001 * 109.47048 * 336.59739 * 1 2 3 30 30 H 1.08000 * 119.92122 * 359.97315 * 3 2 1 31 31 H 1.08997 * 109.47109 * 270.02084 * 5 4 3 32 32 H 1.09000 * 109.47115 * 30.02140 * 5 4 3 33 33 H 1.08998 * 109.46982 * 150.02234 * 5 4 3 34 34 H 1.09000 * 109.47261 * 315.00346 * 7 6 4 35 35 H 0.96700 * 113.99610 * 300.00275 * 8 7 6 36 36 H 1.48497 * 110.00096 * 298.68292 * 9 7 6 37 37 H 1.48502 * 109.99523 * 60.00198 * 9 7 6 38 38 H 1.08002 * 120.07057 * 179.71741 * 10 6 4 39 39 H 0.96992 * 119.99743 * 359.97438 * 14 12 11 40 40 H 1.08998 * 109.47679 * 300.00008 * 15 14 12 41 41 H 1.09003 * 109.47356 * 59.99924 * 15 14 12 42 42 H 1.09008 * 113.61013 * 254.53703 * 18 16 15 43 43 H 1.08999 * 113.61338 * 25.42856 * 18 16 15 44 44 H 1.08000 * 126.12130 * 359.97438 * 22 21 19 45 45 H 1.08005 * 126.03772 * 180.16069 * 23 22 21 46 46 H 1.08000 * 125.90024 * 179.71437 * 24 23 22 47 47 H 1.09000 * 113.61416 * 270.81262 * 26 19 18 48 48 H 1.08999 * 113.69202 * 139.92097 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5821 1.1953 0.0005 5 6 4.3306 2.5032 -0.0001 6 6 4.2813 0.0017 0.0016 7 6 5.7882 0.0131 0.0016 8 8 6.2619 0.3666 1.3027 9 14 6.4221 -1.6791 -0.4515 10 6 3.6020 -1.1993 -0.0031 11 6 2.2065 -1.2081 0.0020 12 6 1.4721 -2.4912 0.0024 13 8 0.2616 -2.4987 -0.1079 14 7 2.1448 -3.6527 0.1252 15 6 1.4170 -4.9240 0.1262 16 6 2.4088 -6.0793 0.2771 17 1 3.2815 -5.9748 -0.3675 18 6 2.7581 -6.4044 1.7390 19 6 2.7032 -7.8897 1.3376 20 1 3.6574 -8.2805 0.9841 21 7 2.0737 -8.7494 2.3430 22 6 1.3652 -8.3322 3.4131 23 6 0.9530 -9.4300 4.0883 24 6 1.4338 -10.5564 3.4129 25 7 2.1058 -10.1496 2.3665 26 6 1.7524 -7.4681 0.2049 27 1 -0.3633 -0.1180 -1.0209 28 1 -0.3634 -0.8250 0.6126 29 1 -0.3633 0.9431 0.4082 30 1 1.6582 2.1290 -0.0004 31 1 4.5112 2.8181 -1.0278 32 1 3.7386 3.2609 0.5134 33 1 5.2835 2.3767 0.5139 34 1 6.1460 0.7419 -0.7257 35 1 5.9699 1.2377 1.6043 36 1 5.9676 -2.6768 0.5501 37 1 5.9365 -2.0583 -1.8027 38 1 4.1491 -2.1305 -0.0069 39 1 3.1107 -3.6467 0.2129 40 1 0.7123 -4.9388 0.9576 41 1 0.8736 -5.0324 -0.8125 42 1 3.7515 -6.0676 2.0358 43 1 1.9826 -6.1147 2.4480 44 1 1.1617 -7.3059 3.6811 45 1 0.3611 -9.4353 4.9917 46 1 1.2777 -11.5844 3.7049 47 1 0.7014 -7.4699 0.4937 48 1 1.9338 -7.9884 -0.7355 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567758_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:00:56 Heat of formation + Delta-G solvation = 65.810530 kcal Electronic energy + Delta-G solvation = -29317.603781 eV Core-core repulsion = 25341.659628 eV Total energy + Delta-G solvation = -3975.944153 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.173 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.30450 -41.74167 -40.45826 -39.69147 -37.72094 -35.96206 -34.38390 -33.68069 -32.55863 -30.94687 -29.94036 -28.92861 -28.11687 -27.13220 -25.60879 -24.65442 -23.85028 -22.38714 -22.24567 -21.73885 -21.03632 -20.31625 -19.10261 -18.40651 -18.25501 -17.34206 -17.08346 -16.67515 -16.50782 -16.38122 -16.19513 -15.64113 -15.48200 -15.34126 -15.04312 -14.98330 -14.69884 -14.59128 -14.42069 -14.03386 -13.95009 -13.82663 -13.51815 -13.50407 -13.39725 -13.10118 -13.03961 -12.83671 -12.81556 -12.66434 -12.43120 -12.26046 -12.00300 -11.83366 -11.50644 -11.37843 -11.23559 -10.66781 -10.29967 -10.27059 -10.01083 -9.69110 -9.47990 -4.96513 -0.34282 0.07354 0.98523 1.20656 1.50565 1.53480 1.71336 1.77284 1.95417 1.99929 2.58268 2.96446 3.08682 3.32508 3.34338 3.41111 3.45342 3.46648 3.65935 3.68630 3.76093 3.92856 3.97901 4.01626 4.02844 4.12557 4.22483 4.31990 4.34651 4.37103 4.40103 4.40804 4.47106 4.56614 4.59648 4.62447 4.66577 4.76289 4.78037 4.84584 4.85781 4.88506 4.97995 5.02710 5.14375 5.15367 5.27203 5.33206 5.48149 5.70124 5.78102 6.10496 6.29849 6.39026 6.83416 7.08243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.010 4.010 3 C -0.127 4.127 4 C -0.041 4.041 5 C -0.126 4.126 6 C -0.129 4.129 7 C -0.083 4.083 8 O -0.533 6.533 9 Si 0.744 3.256 10 C -0.078 4.078 11 C -0.143 4.143 12 C 0.560 3.440 13 O -0.524 6.524 14 N -0.729 5.729 15 C 0.133 3.867 16 C -0.123 4.123 17 H 0.106 0.894 18 C -0.142 4.142 19 C 0.138 3.862 20 H 0.124 0.876 21 N -0.363 5.363 22 C 0.052 3.948 23 C -0.273 4.273 24 C 0.045 3.955 25 N -0.297 5.297 26 C -0.134 4.134 27 H 0.078 0.922 28 H 0.097 0.903 29 H 0.061 0.939 30 H 0.135 0.865 31 H 0.081 0.919 32 H 0.077 0.923 33 H 0.069 0.931 34 H 0.077 0.923 35 H 0.363 0.637 36 H -0.252 1.252 37 H -0.247 1.247 38 H 0.122 0.878 39 H 0.398 0.602 40 H 0.074 0.926 41 H 0.077 0.923 42 H 0.087 0.913 43 H 0.097 0.903 44 H 0.171 0.829 45 H 0.148 0.852 46 H 0.184 0.816 47 H 0.094 0.906 48 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.901 4.031 -0.309 5.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.011 4.011 3 C -0.144 4.144 4 C -0.041 4.041 5 C -0.182 4.182 6 C -0.129 4.129 7 C -0.192 4.192 8 O -0.340 6.340 9 Si 0.642 3.358 10 C -0.096 4.096 11 C -0.146 4.146 12 C 0.348 3.652 13 O -0.402 6.402 14 N -0.382 5.382 15 C 0.009 3.991 16 C -0.142 4.142 17 H 0.124 0.876 18 C -0.180 4.180 19 C 0.036 3.964 20 H 0.142 0.858 21 N -0.145 5.145 22 C -0.094 4.094 23 C -0.303 4.303 24 C -0.141 4.141 25 N -0.118 5.118 26 C -0.173 4.173 27 H 0.097 0.903 28 H 0.115 0.885 29 H 0.080 0.920 30 H 0.153 0.847 31 H 0.100 0.900 32 H 0.096 0.904 33 H 0.088 0.912 34 H 0.095 0.905 35 H 0.212 0.788 36 H -0.177 1.177 37 H -0.171 1.171 38 H 0.139 0.861 39 H 0.233 0.767 40 H 0.093 0.907 41 H 0.095 0.905 42 H 0.105 0.895 43 H 0.115 0.885 44 H 0.188 0.812 45 H 0.166 0.834 46 H 0.200 0.800 47 H 0.113 0.887 48 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 3.816 2.326 -1.757 4.802 hybrid contribution -1.244 1.402 1.001 2.125 sum 2.572 3.728 -0.756 4.592 Atomic orbital electron populations 1.21129 0.89467 1.03434 1.03946 1.20112 0.97146 0.91187 0.92694 1.21031 0.93235 0.97942 1.02235 1.20007 0.93776 0.94870 0.95489 1.20984 1.00043 0.93785 1.03375 1.20034 0.96212 0.92798 1.03853 1.25301 0.91106 1.14201 0.88554 1.86808 1.75312 1.39996 1.31909 0.92922 0.91660 0.72259 0.78974 1.21047 0.93268 0.97341 0.97962 1.19650 0.92924 0.93430 1.08596 1.18214 0.87109 0.83522 0.76360 1.90758 1.13430 1.87026 1.48957 1.45938 1.10876 1.05953 1.75416 1.21347 0.93896 0.80642 1.03171 1.22642 0.99746 0.94474 0.97324 0.87564 1.23610 1.04101 0.93026 0.97270 1.22864 0.97539 0.88029 0.87971 0.85847 1.48702 1.40958 1.04532 1.20335 1.22470 0.96718 1.00503 0.89687 1.21562 1.11774 0.91318 1.05597 1.23953 0.96818 1.00364 0.93011 1.77385 1.23614 0.88669 1.22116 1.23432 1.00127 0.94390 0.99347 0.90299 0.88502 0.91993 0.84698 0.90029 0.90422 0.91215 0.90490 0.78800 1.17715 1.17127 0.86057 0.76710 0.90737 0.90511 0.89458 0.88461 0.81212 0.83433 0.79954 0.88700 0.89467 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.22 8.74 36.00 0.31 0.09 16 2 C -0.01 -0.02 5.91 -104.22 -0.62 -0.64 16 3 C -0.13 -0.06 9.31 -39.64 -0.37 -0.43 16 4 C -0.04 0.00 5.87 -104.53 -0.61 -0.61 16 5 C -0.13 0.35 9.27 36.00 0.33 0.68 16 6 C -0.13 -0.08 5.26 -104.68 -0.55 -0.63 16 7 C -0.08 0.07 1.96 36.00 0.07 0.14 16 8 O -0.53 0.14 12.64 -35.23 -0.45 -0.30 16 9 Si 0.74 -1.18 30.39 -169.99 -5.17 -6.34 16 10 C -0.08 -0.10 8.13 -39.18 -0.32 -0.42 16 11 C -0.14 -0.33 5.87 -104.97 -0.62 -0.95 16 12 C 0.56 1.58 7.70 -12.33 -0.09 1.48 16 13 O -0.52 -2.81 13.34 5.32 0.07 -2.74 16 14 N -0.73 0.00 5.51 -61.25 -0.34 -0.34 16 15 C 0.13 -0.14 5.50 -4.04 -0.02 -0.16 16 16 C -0.12 0.36 3.75 -89.81 -0.34 0.03 16 17 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 18 C -0.14 0.39 6.99 -25.83 -0.18 0.21 16 19 C 0.14 -0.12 5.04 -67.03 -0.34 -0.46 16 20 H 0.12 -0.15 8.14 -51.93 -0.42 -0.57 16 21 N -0.36 -0.71 3.81 -53.99 -0.21 -0.92 16 22 C 0.05 0.05 10.70 -17.22 -0.18 -0.13 16 23 C -0.27 -0.42 10.80 -40.02 -0.43 -0.85 16 24 C 0.04 0.11 12.03 -17.36 -0.21 -0.10 16 25 N -0.30 -1.28 12.58 30.62 0.39 -0.89 16 26 C -0.13 0.24 7.44 -25.92 -0.19 0.05 16 27 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 28 H 0.10 0.33 5.85 -51.93 -0.30 0.03 16 29 H 0.06 0.01 8.04 -51.93 -0.42 -0.41 16 30 H 0.14 -0.20 8.06 -52.49 -0.42 -0.62 16 31 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 32 H 0.08 -0.27 8.08 -51.93 -0.42 -0.69 16 33 H 0.07 -0.27 4.96 -51.93 -0.26 -0.53 16 34 H 0.08 -0.19 7.38 -51.93 -0.38 -0.57 16 35 H 0.36 -0.99 6.84 45.56 0.31 -0.68 16 36 H -0.25 0.00 6.81 56.52 0.39 0.39 16 37 H -0.25 0.03 7.11 56.52 0.40 0.43 16 38 H 0.12 0.00 3.32 -52.49 -0.17 -0.18 16 39 H 0.40 -0.65 6.55 -40.82 -0.27 -0.92 16 40 H 0.07 -0.03 7.88 -51.93 -0.41 -0.44 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.09 -0.29 8.14 -51.92 -0.42 -0.71 16 43 H 0.10 -0.27 6.11 -51.93 -0.32 -0.59 16 44 H 0.17 -0.33 6.70 -52.49 -0.35 -0.68 16 45 H 0.15 -0.05 8.06 -52.48 -0.42 -0.48 16 46 H 0.18 -0.05 8.06 -52.49 -0.42 -0.47 16 47 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 48 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 LS Contribution 383.41 15.07 5.78 5.78 Total: 0.00 -8.31 383.41 -11.13 -19.44 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -6.85 Total: -11.01 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -4.36 Total: -2.68 kcal Atomic # 7 Polarization: -1.99 SS G_CDS: -0.16 Total: -2.14 kcal Atomic # 8 Polarization: -2.67 SS G_CDS: -0.37 Total: -3.04 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.17 Total: -6.34 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -8.31 -11.13 -19.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.250 kcal (2) G-P(sol) polarization free energy of solvation -8.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.938 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.127 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.439 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds