Wall clock time and date at job start Sun Mar 7 2021 07:00:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37940 * 120.07561 * 2 1 4 4 C 1.38382 * 120.14278 * 179.97438 * 3 2 1 5 5 C 1.50698 * 119.85010 * 179.97438 * 4 3 2 6 6 C 1.38337 * 120.29517 * 359.97438 * 4 3 2 7 7 C 1.50690 * 119.92744 * 179.97438 * 6 4 3 8 8 O 1.42906 * 109.47294 * 75.00096 * 7 6 4 9 9 Si 1.86304 * 109.47354 * 195.00092 * 7 6 4 10 10 C 1.37979 * 120.14245 * 0.25288 * 6 4 3 11 11 C 1.39556 * 119.85444 * 359.47842 * 10 6 4 12 12 C 1.47843 * 120.14531 * 180.24328 * 11 10 6 13 13 O 1.21551 * 120.00238 * 186.25916 * 12 11 10 14 14 N 1.34781 * 119.99966 * 6.26376 * 12 11 10 15 15 C 1.46494 * 119.99910 * 179.97438 * 14 12 11 16 16 C 1.53004 * 109.47251 * 179.97438 * 15 14 12 17 17 H 1.09000 * 112.84572 * 314.67108 * 16 15 14 18 18 C 1.53781 * 113.61491 * 85.86454 * 16 15 14 19 19 C 1.53955 * 87.02029 * 139.95476 * 18 16 15 20 20 H 1.09000 * 113.53481 * 89.18676 * 19 18 16 21 21 N 1.46499 * 113.74006 * 220.05234 * 19 18 16 22 22 C 1.34953 * 126.03891 * 12.31892 * 21 19 18 23 23 C 1.35312 * 107.74410 * 179.83627 * 22 21 19 24 24 C 1.39865 * 107.92281 * 0.41655 * 23 22 21 25 25 N 1.30842 * 108.20050 * 359.74411 * 24 23 22 26 26 C 1.53778 * 87.11008 * 334.63751 * 19 18 16 27 27 H 1.09001 * 109.47149 * 96.59151 * 1 2 3 28 28 H 1.08997 * 109.47743 * 216.59524 * 1 2 3 29 29 H 1.09001 * 109.47048 * 336.59739 * 1 2 3 30 30 H 1.08000 * 119.92122 * 359.97315 * 3 2 1 31 31 H 1.08997 * 109.47109 * 270.02084 * 5 4 3 32 32 H 1.09000 * 109.47115 * 30.02140 * 5 4 3 33 33 H 1.08998 * 109.46982 * 150.02234 * 5 4 3 34 34 H 1.09000 * 109.47261 * 315.00346 * 7 6 4 35 35 H 0.96700 * 113.99610 * 300.00275 * 8 7 6 36 36 H 1.48497 * 110.00096 * 298.68292 * 9 7 6 37 37 H 1.48502 * 109.99523 * 60.00198 * 9 7 6 38 38 H 1.08002 * 120.07057 * 179.71741 * 10 6 4 39 39 H 0.96992 * 119.99743 * 359.97438 * 14 12 11 40 40 H 1.08998 * 109.47679 * 300.00008 * 15 14 12 41 41 H 1.09003 * 109.47356 * 59.99924 * 15 14 12 42 42 H 1.09008 * 113.61013 * 254.53703 * 18 16 15 43 43 H 1.08999 * 113.61338 * 25.42856 * 18 16 15 44 44 H 1.08000 * 126.12130 * 359.97438 * 22 21 19 45 45 H 1.08005 * 126.03772 * 180.16069 * 23 22 21 46 46 H 1.08000 * 125.90024 * 179.71437 * 24 23 22 47 47 H 1.09000 * 113.61416 * 270.81262 * 26 19 18 48 48 H 1.08999 * 113.69202 * 139.92097 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5821 1.1953 0.0005 5 6 4.3306 2.5032 -0.0001 6 6 4.2813 0.0017 0.0016 7 6 5.7882 0.0131 0.0016 8 8 6.2619 0.3666 1.3027 9 14 6.4221 -1.6791 -0.4515 10 6 3.6020 -1.1993 -0.0031 11 6 2.2065 -1.2081 0.0020 12 6 1.4721 -2.4912 0.0024 13 8 0.2616 -2.4987 -0.1079 14 7 2.1448 -3.6527 0.1252 15 6 1.4170 -4.9240 0.1262 16 6 2.4088 -6.0793 0.2771 17 1 3.2815 -5.9748 -0.3675 18 6 2.7581 -6.4044 1.7390 19 6 2.7032 -7.8897 1.3376 20 1 3.6574 -8.2805 0.9841 21 7 2.0737 -8.7494 2.3430 22 6 1.3652 -8.3322 3.4131 23 6 0.9530 -9.4300 4.0883 24 6 1.4338 -10.5564 3.4129 25 7 2.1058 -10.1496 2.3665 26 6 1.7524 -7.4681 0.2049 27 1 -0.3633 -0.1180 -1.0209 28 1 -0.3634 -0.8250 0.6126 29 1 -0.3633 0.9431 0.4082 30 1 1.6582 2.1290 -0.0004 31 1 4.5112 2.8181 -1.0278 32 1 3.7386 3.2609 0.5134 33 1 5.2835 2.3767 0.5139 34 1 6.1460 0.7419 -0.7257 35 1 5.9699 1.2377 1.6043 36 1 5.9676 -2.6768 0.5501 37 1 5.9365 -2.0583 -1.8027 38 1 4.1491 -2.1305 -0.0069 39 1 3.1107 -3.6467 0.2129 40 1 0.7123 -4.9388 0.9576 41 1 0.8736 -5.0324 -0.8125 42 1 3.7515 -6.0676 2.0358 43 1 1.9826 -6.1147 2.4480 44 1 1.1617 -7.3059 3.6811 45 1 0.3611 -9.4353 4.9917 46 1 1.2777 -11.5844 3.7049 47 1 0.7014 -7.4699 0.4937 48 1 1.9338 -7.9884 -0.7355 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567758_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:00:55 Heat of formation + Delta-G solvation = 68.901001 kcal Electronic energy + Delta-G solvation = -29317.469768 eV Core-core repulsion = 25341.659628 eV Total energy + Delta-G solvation = -3975.810140 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.173 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.34526 -41.81230 -40.45107 -39.71165 -37.67705 -36.06608 -34.37436 -33.69119 -32.60375 -31.03727 -29.94061 -28.92767 -28.05174 -26.98565 -25.60896 -24.65377 -23.83148 -22.44893 -22.25412 -21.81188 -21.08036 -20.25257 -19.10571 -18.36220 -18.29100 -17.33396 -17.02450 -16.67838 -16.58523 -16.42014 -16.17810 -15.65654 -15.49412 -15.34478 -15.06103 -14.95932 -14.69231 -14.63242 -14.37583 -14.02042 -13.90954 -13.79046 -13.48047 -13.43205 -13.34610 -13.07071 -13.01980 -12.83527 -12.77333 -12.64834 -12.33436 -12.23350 -11.92129 -11.72412 -11.58319 -11.32672 -11.14907 -10.80879 -10.41600 -10.37198 -10.02525 -9.72290 -9.56290 -4.83424 -0.40049 0.03843 0.90110 1.32687 1.53548 1.56082 1.66162 1.88038 1.88962 1.91264 2.51267 3.07174 3.21565 3.35577 3.39525 3.47022 3.52034 3.55828 3.68566 3.80107 3.81278 3.98425 4.03050 4.06700 4.09823 4.18674 4.35065 4.40757 4.41609 4.46614 4.50626 4.57643 4.58957 4.62427 4.67262 4.68369 4.69898 4.76947 4.79116 4.82540 4.88751 4.95306 5.01661 5.09682 5.10286 5.16991 5.27700 5.33435 5.39266 5.69500 5.70550 6.09871 6.23592 6.61296 6.72317 6.95504 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.029 4.029 3 C -0.131 4.131 4 C -0.040 4.040 5 C -0.126 4.126 6 C -0.138 4.138 7 C -0.088 4.088 8 O -0.544 6.544 9 Si 0.792 3.208 10 C -0.086 4.086 11 C -0.161 4.161 12 C 0.554 3.446 13 O -0.558 6.558 14 N -0.719 5.719 15 C 0.134 3.866 16 C -0.107 4.107 17 H 0.122 0.878 18 C -0.133 4.133 19 C 0.127 3.873 20 H 0.126 0.874 21 N -0.367 5.367 22 C 0.051 3.949 23 C -0.289 4.289 24 C 0.033 3.967 25 N -0.341 5.341 26 C -0.131 4.131 27 H 0.070 0.930 28 H 0.076 0.924 29 H 0.078 0.922 30 H 0.154 0.846 31 H 0.090 0.910 32 H 0.087 0.913 33 H 0.082 0.918 34 H 0.097 0.903 35 H 0.374 0.626 36 H -0.275 1.275 37 H -0.268 1.268 38 H 0.129 0.871 39 H 0.407 0.593 40 H 0.069 0.931 41 H 0.067 0.933 42 H 0.098 0.902 43 H 0.099 0.901 44 H 0.197 0.803 45 H 0.163 0.837 46 H 0.200 0.800 47 H 0.085 0.915 48 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.275 5.605 -0.077 7.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.030 4.030 3 C -0.148 4.148 4 C -0.040 4.040 5 C -0.182 4.182 6 C -0.139 4.139 7 C -0.197 4.197 8 O -0.353 6.353 9 Si 0.693 3.307 10 C -0.105 4.105 11 C -0.165 4.165 12 C 0.343 3.657 13 O -0.439 6.439 14 N -0.371 5.371 15 C 0.011 3.989 16 C -0.126 4.126 17 H 0.140 0.860 18 C -0.171 4.171 19 C 0.026 3.974 20 H 0.143 0.857 21 N -0.149 5.149 22 C -0.096 4.096 23 C -0.318 4.318 24 C -0.152 4.152 25 N -0.162 5.162 26 C -0.170 4.170 27 H 0.088 0.912 28 H 0.095 0.905 29 H 0.097 0.903 30 H 0.171 0.829 31 H 0.108 0.892 32 H 0.106 0.894 33 H 0.101 0.899 34 H 0.115 0.885 35 H 0.225 0.775 36 H -0.201 1.201 37 H -0.194 1.194 38 H 0.146 0.854 39 H 0.243 0.757 40 H 0.087 0.913 41 H 0.086 0.914 42 H 0.117 0.883 43 H 0.118 0.882 44 H 0.213 0.787 45 H 0.181 0.819 46 H 0.217 0.783 47 H 0.104 0.896 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 5.225 3.900 -1.522 6.695 hybrid contribution -1.673 0.931 0.931 2.129 sum 3.552 4.831 -0.591 6.025 Atomic orbital electron populations 1.21023 0.89801 1.03438 1.03105 1.20282 0.97208 0.91902 0.93593 1.21285 0.93788 0.98029 1.01723 1.20351 0.93714 0.95917 0.94008 1.21071 1.00458 0.92408 1.04232 1.20330 0.97215 0.92794 1.03525 1.25416 0.90036 1.15282 0.88933 1.86772 1.75381 1.41003 1.32143 0.92367 0.90773 0.70976 0.76619 1.21197 0.92925 0.98217 0.98123 1.19728 0.93512 0.93337 1.09873 1.18444 0.86841 0.84405 0.76034 1.90738 1.14768 1.87560 1.50804 1.45892 1.11317 1.05629 1.74219 1.21358 0.94272 0.80796 1.02471 1.22544 0.99501 0.92837 0.97706 0.85965 1.23596 1.04849 0.91399 0.97242 1.23117 0.97673 0.88591 0.88044 0.85661 1.48933 1.41026 1.04054 1.20935 1.22960 0.95819 1.01683 0.89096 1.21879 1.12290 0.91231 1.06374 1.24375 0.96441 1.01648 0.92759 1.77304 1.25236 0.90248 1.23433 1.23382 0.99517 0.94993 0.99123 0.91162 0.90505 0.90329 0.82874 0.89163 0.89415 0.89903 0.88501 0.77547 1.20135 1.19430 0.85410 0.75676 0.91319 0.91447 0.88304 0.88224 0.78657 0.81905 0.78297 0.89645 0.89324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.59 8.74 71.24 0.62 0.03 16 2 C -0.03 -0.14 5.91 -19.61 -0.12 -0.26 16 3 C -0.13 -0.07 9.31 22.23 0.21 0.14 16 4 C -0.04 0.05 5.87 -19.81 -0.12 -0.07 16 5 C -0.13 0.96 9.27 71.24 0.66 1.62 16 6 C -0.14 -0.07 5.26 -19.91 -0.10 -0.18 16 7 C -0.09 0.27 1.96 71.23 0.14 0.41 16 8 O -0.54 1.12 12.64 -148.98 -1.88 -0.76 16 9 Si 0.79 -2.96 30.39 68.60 2.08 -0.87 16 10 C -0.09 -0.24 8.13 22.53 0.18 -0.06 16 11 C -0.16 -0.94 5.87 -20.09 -0.12 -1.05 16 12 C 0.55 4.01 7.70 86.79 0.67 4.67 16 13 O -0.56 -7.29 13.34 -3.88 -0.05 -7.34 16 14 N -0.72 -0.60 5.51 -465.98 -2.57 -3.17 16 15 C 0.13 -0.17 5.50 86.38 0.47 0.31 16 16 C -0.11 0.64 3.75 -10.27 -0.04 0.60 16 17 H 0.12 -1.07 8.14 -2.39 -0.02 -1.09 16 18 C -0.13 0.79 6.99 31.18 0.22 1.00 16 19 C 0.13 -0.19 5.04 45.58 0.23 0.04 16 20 H 0.13 -0.27 8.14 -2.39 -0.02 -0.29 16 21 N -0.37 -1.65 3.81 -324.71 -1.24 -2.89 16 22 C 0.05 0.10 10.70 83.54 0.89 1.00 16 23 C -0.29 -0.98 10.80 21.99 0.24 -0.74 16 24 C 0.03 0.20 12.03 85.23 1.02 1.22 16 25 N -0.34 -3.32 12.58 -57.02 -0.72 -4.04 16 26 C -0.13 0.41 7.44 31.12 0.23 0.64 16 27 H 0.07 0.43 8.14 -2.39 -0.02 0.41 16 28 H 0.08 0.71 5.85 -2.39 -0.01 0.70 16 29 H 0.08 0.06 8.04 -2.39 -0.02 0.04 16 30 H 0.15 -0.61 8.06 -2.91 -0.02 -0.63 16 31 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 32 H 0.09 -0.81 8.08 -2.39 -0.02 -0.83 16 33 H 0.08 -0.84 4.96 -2.39 -0.01 -0.85 16 34 H 0.10 -0.68 7.38 -2.39 -0.02 -0.70 16 35 H 0.37 -2.73 6.84 -74.06 -0.51 -3.23 16 36 H -0.27 0.04 6.81 99.48 0.68 0.72 16 37 H -0.27 0.08 7.11 99.48 0.71 0.79 16 38 H 0.13 0.03 3.32 -2.91 -0.01 0.02 16 39 H 0.41 -1.21 6.55 -92.71 -0.61 -1.81 16 40 H 0.07 0.02 7.88 -2.39 -0.02 0.00 16 41 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 42 H 0.10 -0.76 8.14 -2.38 -0.02 -0.78 16 43 H 0.10 -0.61 6.11 -2.39 -0.01 -0.63 16 44 H 0.20 -0.87 6.70 -2.91 -0.02 -0.89 16 45 H 0.16 -0.13 8.06 -2.91 -0.02 -0.16 16 46 H 0.20 0.07 8.06 -2.91 -0.02 0.05 16 47 H 0.08 -0.08 8.10 -2.39 -0.02 -0.10 16 48 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 Total: 0.00 -20.92 383.41 0.83 -20.09 By element: Atomic # 1 Polarization: -10.25 SS G_CDS: -0.10 Total: -10.35 kcal Atomic # 6 Polarization: 4.03 SS G_CDS: 5.30 Total: 9.32 kcal Atomic # 7 Polarization: -5.58 SS G_CDS: -4.52 Total: -10.10 kcal Atomic # 8 Polarization: -6.16 SS G_CDS: -1.94 Total: -8.10 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.08 Total: -0.87 kcal Total: -20.92 0.83 -20.09 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.989 kcal (2) G-P(sol) polarization free energy of solvation -20.917 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.088 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds