Wall clock time and date at job start Sun Mar 7 2021 07:01:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.34244 * 126.50055 * 105.02329 * 4 2 1 6 6 N 1.36832 * 109.93956 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.06227 * 180.02562 * 6 5 4 8 8 C 1.50702 * 109.46815 * 264.97193 * 7 6 5 9 9 O 1.21286 * 120.00088 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99767 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99841 * 180.02562 * 10 8 7 12 12 C 1.53003 * 109.47137 * 179.97438 * 11 10 8 13 13 H 1.09003 * 112.85101 * 45.32742 * 12 11 10 14 14 C 1.53780 * 113.61655 * 176.52589 * 12 11 10 15 15 C 1.53780 * 87.07992 * 139.97852 * 14 12 11 16 16 H 1.09003 * 113.61419 * 89.12000 * 15 14 12 17 17 N 1.46499 * 113.61355 * 220.01902 * 15 14 12 18 18 C 1.34948 * 126.04048 * 85.00503 * 17 15 14 19 19 C 1.35311 * 107.75091 * 179.97438 * 18 17 15 20 20 C 1.39875 * 107.92016 * 359.97438 * 19 18 17 21 21 N 1.30836 * 108.20029 * 359.74333 * 20 19 18 22 22 C 1.53785 * 113.61281 * 274.13562 * 12 11 10 23 23 C 1.37692 * 109.87067 * 359.97438 * 6 5 4 24 24 C 1.39091 * 133.50738 * 180.02562 * 23 6 5 25 25 C 1.37791 * 119.77713 * 179.97438 * 24 23 6 26 26 C 1.38787 * 120.66589 * 359.97438 * 25 24 23 27 27 C 1.36664 * 120.53008 * 0.02562 * 26 25 24 28 28 C 1.39592 * 119.76389 * 359.67742 * 27 26 25 29 29 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 30 30 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 31 31 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 32 32 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 33 33 H 1.08004 * 125.03047 * 359.97438 * 5 4 2 34 34 H 1.08996 * 109.47318 * 24.97043 * 7 6 5 35 35 H 1.09000 * 109.47208 * 144.97539 * 7 6 5 36 36 H 0.97000 * 120.00180 * 359.97438 * 10 8 7 37 37 H 1.09006 * 109.46823 * 299.99497 * 11 10 8 38 38 H 1.08998 * 109.47714 * 59.99416 * 11 10 8 39 39 H 1.09000 * 113.61382 * 254.53182 * 14 12 11 40 40 H 1.09000 * 113.61183 * 25.43171 * 14 12 11 41 41 H 1.08002 * 126.12251 * 359.97438 * 18 17 15 42 42 H 1.07997 * 126.04239 * 180.02562 * 19 18 17 43 43 H 1.07992 * 125.89826 * 179.97438 * 20 19 18 44 44 H 1.09001 * 113.61113 * 334.56304 * 22 12 11 45 45 H 1.08997 * 113.61319 * 105.47000 * 22 12 11 46 46 H 1.07997 * 120.11188 * 359.93108 * 24 23 6 47 47 H 1.07995 * 119.66578 * 180.02562 * 25 24 23 48 48 H 1.08000 * 119.73784 * 180.02562 * 26 25 24 49 49 H 1.07992 * 120.11907 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4613 -0.1376 -2.3227 6 7 2.8038 -1.0990 -3.2341 7 6 3.4097 -0.8405 -4.5427 8 6 2.3308 -0.7844 -5.5934 9 8 1.1702 -0.9452 -5.2801 10 7 2.6558 -0.5567 -6.8814 11 6 1.6069 -0.5017 -7.9028 12 6 2.2396 -0.2318 -9.2695 13 1 3.1219 -0.8441 -9.4559 14 6 1.2289 -0.2388 -10.4284 15 6 2.0014 0.9591 -11.0055 16 1 2.8192 0.6735 -11.6671 17 7 1.1371 1.9928 -11.5806 18 6 0.5435 2.9982 -10.9039 19 6 -0.1653 3.7318 -11.7930 20 6 0.0014 3.1554 -13.0565 21 7 0.7866 2.1163 -12.9313 22 6 2.4530 1.2622 -9.5652 23 6 2.4953 -2.3457 -2.7377 24 6 2.6313 -3.6363 -3.2382 25 6 2.2182 -4.7109 -2.4811 26 6 1.6672 -4.5196 -1.2218 27 6 1.5242 -3.2602 -0.7106 28 6 1.9418 -2.1575 -1.4578 29 1 -0.3934 0.4417 0.7649 30 1 1.7923 -0.5138 0.8900 31 1 1.5614 2.4679 -1.2085 32 1 1.5878 2.4586 1.2242 33 1 2.5973 0.9248 -2.4616 34 1 3.9403 0.1112 -4.5158 35 1 4.1099 -1.6403 -4.7833 36 1 3.5840 -0.4285 -7.1321 37 1 1.0756 -1.4531 -7.9295 38 1 0.9071 0.2986 -7.6623 39 1 1.2826 -1.1331 -11.0492 40 1 0.2115 0.0044 -10.1220 41 1 0.6203 3.1839 -9.8428 42 1 -0.7548 4.6080 -11.5671 43 1 -0.4387 3.5092 -13.9770 44 1 1.7709 1.9165 -9.0223 45 1 3.4936 1.5778 -9.4902 46 1 3.0587 -3.7955 -4.2172 47 1 2.3251 -5.7122 -2.8713 48 1 1.3488 -5.3727 -0.6411 49 1 1.0942 -3.1190 0.2699 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567758_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:00 Heat of formation + Delta-G solvation = 119.885764 kcal Electronic energy + Delta-G solvation = -31790.755689 eV Core-core repulsion = 27495.278222 eV Total energy + Delta-G solvation = -4295.477467 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.47506 -42.31378 -40.86078 -39.85476 -37.97632 -37.61918 -35.81767 -34.17422 -32.72852 -31.45462 -30.97094 -30.17245 -29.69784 -28.17542 -27.18217 -25.67752 -24.54955 -23.58219 -22.57199 -22.30109 -21.80668 -21.53608 -20.45200 -20.36759 -18.92174 -18.39325 -18.20741 -18.02714 -17.64723 -17.25112 -16.73235 -16.53688 -16.31462 -15.77337 -15.71258 -15.48002 -15.43315 -15.10341 -14.77258 -14.74316 -14.63956 -14.42952 -14.32338 -14.03602 -14.00654 -13.55304 -13.51646 -13.43898 -13.36515 -13.08216 -12.65799 -12.50988 -12.43958 -12.39161 -12.07003 -11.99050 -11.88414 -11.59684 -11.54707 -11.11069 -10.40460 -10.33417 -10.32681 -10.26989 -9.51443 -9.00703 -8.51546 -4.94272 0.28840 0.80238 0.94834 1.33221 1.37273 1.39446 1.51509 1.60880 1.74589 1.96604 1.99080 2.06658 2.91177 3.02715 3.10325 3.28864 3.36835 3.46124 3.49596 3.67804 3.70464 3.73684 3.81530 3.88354 3.90238 3.93365 4.07774 4.08433 4.26776 4.32343 4.32543 4.36313 4.41661 4.45405 4.51967 4.58629 4.62761 4.70921 4.74154 4.80435 4.84554 4.91685 4.98049 5.00534 5.11984 5.15882 5.26538 5.65769 5.74681 5.81593 5.86730 5.90862 6.06927 6.11494 6.30239 6.37660 6.62833 6.79825 6.97135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.037 4.037 3 Si 0.679 3.321 4 C -0.151 4.151 5 C 0.071 3.929 6 N -0.466 5.466 7 C 0.093 3.907 8 C 0.488 3.512 9 O -0.511 6.511 10 N -0.729 5.729 11 C 0.133 3.867 12 C -0.119 4.119 13 H 0.108 0.892 14 C -0.136 4.136 15 C 0.138 3.862 16 H 0.124 0.876 17 N -0.364 5.364 18 C 0.052 3.948 19 C -0.273 4.273 20 C 0.045 3.955 21 N -0.297 5.297 22 C -0.141 4.141 23 C 0.109 3.891 24 C -0.127 4.127 25 C -0.097 4.097 26 C -0.146 4.146 27 C -0.065 4.065 28 C -0.086 4.086 29 H 0.375 0.625 30 H 0.072 0.928 31 H -0.256 1.256 32 H -0.260 1.260 33 H 0.169 0.831 34 H 0.124 0.876 35 H 0.119 0.881 36 H 0.403 0.597 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.086 0.914 40 H 0.094 0.906 41 H 0.171 0.829 42 H 0.148 0.852 43 H 0.184 0.816 44 H 0.096 0.904 45 H 0.087 0.913 46 H 0.115 0.885 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.216 1.416 0.473 7.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.148 4.148 3 Si 0.580 3.420 4 C -0.158 4.158 5 C -0.053 4.053 6 N -0.150 5.150 7 C -0.033 4.033 8 C 0.272 3.728 9 O -0.384 6.384 10 N -0.383 5.383 11 C 0.009 3.991 12 C -0.138 4.138 13 H 0.126 0.874 14 C -0.175 4.175 15 C 0.036 3.964 16 H 0.142 0.858 17 N -0.146 5.146 18 C -0.094 4.094 19 C -0.302 4.302 20 C -0.141 4.141 21 N -0.118 5.118 22 C -0.179 4.179 23 C 0.005 3.995 24 C -0.148 4.148 25 C -0.116 4.116 26 C -0.165 4.165 27 C -0.083 4.083 28 C -0.090 4.090 29 H 0.222 0.778 30 H 0.090 0.910 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.186 0.814 34 H 0.142 0.858 35 H 0.137 0.863 36 H 0.237 0.763 37 H 0.093 0.907 38 H 0.090 0.910 39 H 0.105 0.895 40 H 0.112 0.888 41 H 0.188 0.812 42 H 0.166 0.834 43 H 0.201 0.799 44 H 0.114 0.886 45 H 0.106 0.894 46 H 0.133 0.867 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 7.037 0.854 -0.698 7.123 hybrid contribution -1.187 0.703 0.590 1.500 sum 5.850 1.557 -0.108 6.055 Atomic orbital electron populations 1.86674 1.18276 1.79832 1.49345 1.24021 0.83892 1.09740 0.97103 0.95412 0.91444 0.74678 0.80465 1.19411 1.08256 0.91606 0.96523 1.21496 1.01245 0.93838 0.88745 1.43160 1.53996 1.04624 1.13205 1.21576 0.94459 1.06050 0.81265 1.21063 0.90885 0.77326 0.83525 1.90845 1.19917 1.46905 1.80779 1.45921 1.11104 1.74227 1.07021 1.21326 0.89956 1.02859 0.84927 1.22621 1.00237 0.96821 0.94165 0.87382 1.23449 0.99247 0.98618 0.96203 1.22870 0.92848 0.86923 0.93808 0.85837 1.48707 1.38100 1.22433 1.05358 1.22458 0.97125 0.90567 0.99249 1.21570 1.10032 1.05941 0.92685 1.23957 0.97330 0.93620 0.99204 1.77389 1.18778 1.21029 0.94579 1.23601 1.03406 0.97017 0.93877 1.18153 1.01543 0.85855 0.93954 1.19949 1.05312 0.89234 1.00284 1.20817 0.98406 0.97940 0.94452 1.20660 1.02453 0.96894 0.96465 1.20270 0.97849 0.90949 0.99261 1.18945 1.03148 0.92761 0.94167 0.77776 0.91031 1.18039 1.18509 0.81405 0.85843 0.86311 0.76301 0.90731 0.91020 0.89486 0.88788 0.81222 0.83432 0.79946 0.88594 0.89401 0.86722 0.85723 0.85936 0.86093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.74 12.86 -35.23 -0.45 -2.19 16 2 C -0.04 -0.06 3.05 36.00 0.11 0.05 16 3 Si 0.68 -0.34 30.79 -169.99 -5.23 -5.57 16 4 C -0.15 -0.51 5.61 -102.71 -0.58 -1.08 16 5 C 0.07 0.13 9.89 -16.73 -0.17 -0.04 16 6 N -0.47 -0.74 2.27 -115.71 -0.26 -1.00 16 7 C 0.09 -0.25 6.48 -5.19 -0.03 -0.28 16 8 C 0.49 -0.04 7.90 -10.99 -0.09 -0.13 16 9 O -0.51 -2.92 16.42 5.55 0.09 -2.83 16 10 N -0.73 2.55 5.56 -60.29 -0.33 2.21 16 11 C 0.13 -0.34 5.50 -4.04 -0.02 -0.37 16 12 C -0.12 0.56 3.75 -89.80 -0.34 0.22 16 13 H 0.11 -0.65 8.14 -51.93 -0.42 -1.08 16 14 C -0.14 0.36 7.44 -25.92 -0.19 0.17 16 15 C 0.14 -0.26 5.04 -67.03 -0.34 -0.60 16 16 H 0.12 -0.28 8.14 -51.93 -0.42 -0.70 16 17 N -0.36 -0.48 3.81 -53.99 -0.21 -0.68 16 18 C 0.05 0.02 10.69 -17.22 -0.18 -0.16 16 19 C -0.27 -0.31 10.80 -40.01 -0.43 -0.74 16 20 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 21 N -0.30 -1.14 12.58 30.62 0.39 -0.76 16 22 C -0.14 0.62 7.00 -25.83 -0.18 0.44 16 23 C 0.11 0.41 6.80 -83.98 -0.57 -0.16 16 24 C -0.13 -0.33 10.00 -39.43 -0.39 -0.73 16 25 C -0.10 -0.22 10.01 -39.54 -0.40 -0.61 16 26 C -0.15 -0.39 9.97 -39.95 -0.40 -0.79 16 27 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 28 C -0.09 -0.40 6.35 -105.14 -0.67 -1.07 16 29 H 0.37 -0.43 8.74 45.56 0.40 -0.03 16 30 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 31 H -0.26 -0.57 7.04 56.52 0.40 -0.17 16 32 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 33 H 0.17 -0.15 6.30 -52.48 -0.33 -0.48 16 34 H 0.12 -0.76 8.12 -51.93 -0.42 -1.18 16 35 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 36 H 0.40 -2.76 8.47 -40.82 -0.35 -3.11 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.07 -0.08 7.87 -51.93 -0.41 -0.49 16 39 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 41 H 0.17 -0.44 6.69 -52.49 -0.35 -0.79 16 42 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 43 H 0.18 -0.10 8.06 -52.49 -0.42 -0.53 16 44 H 0.10 -0.40 6.10 -51.93 -0.32 -0.71 16 45 H 0.09 -0.48 8.14 -51.93 -0.42 -0.90 16 46 H 0.11 0.06 8.06 -52.49 -0.42 -0.37 16 47 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 48 H 0.12 0.08 8.06 -52.49 -0.42 -0.35 16 49 H 0.12 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 412.34 15.07 6.21 6.21 Total: 0.00 -14.15 412.34 -12.16 -26.31 By element: Atomic # 1 Polarization: -8.17 SS G_CDS: -6.89 Total: -15.06 kcal Atomic # 6 Polarization: -1.16 SS G_CDS: -5.47 Total: -6.63 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.42 Total: -0.23 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -0.36 Total: -5.03 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.23 Total: -5.57 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -14.15 -12.16 -26.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 146.192 kcal (2) G-P(sol) polarization free energy of solvation -14.148 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.307 kcal (6) G-S(sol) free energy of system = (1) + (5) 119.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds