Wall clock time and date at job start Sun Mar 7 2021 07:00:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.34244 * 126.50055 * 105.02329 * 4 2 1 6 6 N 1.36832 * 109.93956 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.06227 * 180.02562 * 6 5 4 8 8 C 1.50702 * 109.46815 * 264.97193 * 7 6 5 9 9 O 1.21286 * 120.00088 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99767 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99841 * 180.02562 * 10 8 7 12 12 C 1.53003 * 109.47137 * 179.97438 * 11 10 8 13 13 H 1.09003 * 112.85101 * 45.32742 * 12 11 10 14 14 C 1.53780 * 113.61655 * 176.52589 * 12 11 10 15 15 C 1.53780 * 87.07992 * 139.97852 * 14 12 11 16 16 H 1.09003 * 113.61419 * 89.12000 * 15 14 12 17 17 N 1.46499 * 113.61355 * 220.01902 * 15 14 12 18 18 C 1.34948 * 126.04048 * 85.00503 * 17 15 14 19 19 C 1.35311 * 107.75091 * 179.97438 * 18 17 15 20 20 C 1.39875 * 107.92016 * 359.97438 * 19 18 17 21 21 N 1.30836 * 108.20029 * 359.74333 * 20 19 18 22 22 C 1.53785 * 113.61281 * 274.13562 * 12 11 10 23 23 C 1.37692 * 109.87067 * 359.97438 * 6 5 4 24 24 C 1.39091 * 133.50738 * 180.02562 * 23 6 5 25 25 C 1.37791 * 119.77713 * 179.97438 * 24 23 6 26 26 C 1.38787 * 120.66589 * 359.97438 * 25 24 23 27 27 C 1.36664 * 120.53008 * 0.02562 * 26 25 24 28 28 C 1.39592 * 119.76389 * 359.67742 * 27 26 25 29 29 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 30 30 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 31 31 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 32 32 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 33 33 H 1.08004 * 125.03047 * 359.97438 * 5 4 2 34 34 H 1.08996 * 109.47318 * 24.97043 * 7 6 5 35 35 H 1.09000 * 109.47208 * 144.97539 * 7 6 5 36 36 H 0.97000 * 120.00180 * 359.97438 * 10 8 7 37 37 H 1.09006 * 109.46823 * 299.99497 * 11 10 8 38 38 H 1.08998 * 109.47714 * 59.99416 * 11 10 8 39 39 H 1.09000 * 113.61382 * 254.53182 * 14 12 11 40 40 H 1.09000 * 113.61183 * 25.43171 * 14 12 11 41 41 H 1.08002 * 126.12251 * 359.97438 * 18 17 15 42 42 H 1.07997 * 126.04239 * 180.02562 * 19 18 17 43 43 H 1.07992 * 125.89826 * 179.97438 * 20 19 18 44 44 H 1.09001 * 113.61113 * 334.56304 * 22 12 11 45 45 H 1.08997 * 113.61319 * 105.47000 * 22 12 11 46 46 H 1.07997 * 120.11188 * 359.93108 * 24 23 6 47 47 H 1.07995 * 119.66578 * 180.02562 * 25 24 23 48 48 H 1.08000 * 119.73784 * 180.02562 * 26 25 24 49 49 H 1.07992 * 120.11907 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4613 -0.1376 -2.3227 6 7 2.8038 -1.0990 -3.2341 7 6 3.4097 -0.8405 -4.5427 8 6 2.3308 -0.7844 -5.5934 9 8 1.1702 -0.9452 -5.2801 10 7 2.6558 -0.5567 -6.8814 11 6 1.6069 -0.5017 -7.9028 12 6 2.2396 -0.2318 -9.2695 13 1 3.1219 -0.8441 -9.4559 14 6 1.2289 -0.2388 -10.4284 15 6 2.0014 0.9591 -11.0055 16 1 2.8192 0.6735 -11.6671 17 7 1.1371 1.9928 -11.5806 18 6 0.5435 2.9982 -10.9039 19 6 -0.1653 3.7318 -11.7930 20 6 0.0014 3.1554 -13.0565 21 7 0.7866 2.1163 -12.9313 22 6 2.4530 1.2622 -9.5652 23 6 2.4953 -2.3457 -2.7377 24 6 2.6313 -3.6363 -3.2382 25 6 2.2182 -4.7109 -2.4811 26 6 1.6672 -4.5196 -1.2218 27 6 1.5242 -3.2602 -0.7106 28 6 1.9418 -2.1575 -1.4578 29 1 -0.3934 0.4417 0.7649 30 1 1.7923 -0.5138 0.8900 31 1 1.5614 2.4679 -1.2085 32 1 1.5878 2.4586 1.2242 33 1 2.5973 0.9248 -2.4616 34 1 3.9403 0.1112 -4.5158 35 1 4.1099 -1.6403 -4.7833 36 1 3.5840 -0.4285 -7.1321 37 1 1.0756 -1.4531 -7.9295 38 1 0.9071 0.2986 -7.6623 39 1 1.2826 -1.1331 -11.0492 40 1 0.2115 0.0044 -10.1220 41 1 0.6203 3.1839 -9.8428 42 1 -0.7548 4.6080 -11.5671 43 1 -0.4387 3.5092 -13.9770 44 1 1.7709 1.9165 -9.0223 45 1 3.4936 1.5778 -9.4902 46 1 3.0587 -3.7955 -4.2172 47 1 2.3251 -5.7122 -2.8713 48 1 1.3488 -5.3727 -0.6411 49 1 1.0942 -3.1190 0.2699 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567758_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:00:59 Heat of formation + Delta-G solvation = 116.957898 kcal Electronic energy + Delta-G solvation = -31790.882650 eV Core-core repulsion = 27495.278222 eV Total energy + Delta-G solvation = -4295.604429 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.52471 -42.29882 -40.81393 -39.74497 -38.09482 -37.72976 -35.76472 -34.21072 -32.71028 -31.51839 -31.01409 -30.28928 -29.69091 -28.08765 -26.92041 -25.70359 -24.48211 -23.69588 -22.65916 -22.22606 -21.79209 -21.50070 -20.54043 -20.21024 -18.83055 -18.51064 -18.17538 -18.00857 -17.69603 -17.04569 -16.65703 -16.47990 -16.40463 -15.83323 -15.73804 -15.44816 -15.40856 -15.06307 -14.82459 -14.76405 -14.74765 -14.43348 -14.32375 -14.11527 -13.89731 -13.52831 -13.43667 -13.33364 -13.21336 -12.96757 -12.72620 -12.56797 -12.51562 -12.29106 -12.09716 -11.87223 -11.71922 -11.65477 -11.56727 -11.14494 -10.54282 -10.39634 -10.34632 -10.21995 -9.54811 -9.15422 -8.62736 -4.90488 0.14216 0.64261 0.91463 1.32206 1.39075 1.45411 1.58088 1.62200 1.73383 1.89352 1.98084 2.18526 2.93710 3.14316 3.28938 3.51600 3.56342 3.61436 3.64356 3.77642 3.80307 3.84745 3.85142 4.00605 4.02937 4.13736 4.16752 4.23162 4.25505 4.28570 4.40970 4.47690 4.56488 4.57449 4.64762 4.67959 4.71632 4.73645 4.79658 4.83961 4.87502 4.90737 4.93789 5.10479 5.14722 5.19735 5.36239 5.51499 5.66400 5.71236 5.73442 5.75891 6.12841 6.18082 6.24288 6.47510 6.67709 6.73288 7.14046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.059 4.059 3 Si 0.783 3.217 4 C -0.183 4.183 5 C 0.074 3.926 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.487 3.513 9 O -0.578 6.578 10 N -0.707 5.707 11 C 0.135 3.865 12 C -0.097 4.097 13 H 0.133 0.867 14 C -0.140 4.140 15 C 0.123 3.877 16 H 0.127 0.873 17 N -0.367 5.367 18 C 0.052 3.948 19 C -0.291 4.291 20 C 0.031 3.969 21 N -0.342 5.342 22 C -0.127 4.127 23 C 0.091 3.909 24 C -0.133 4.133 25 C -0.108 4.108 26 C -0.154 4.154 27 C -0.088 4.088 28 C -0.118 4.118 29 H 0.389 0.611 30 H 0.078 0.922 31 H -0.289 1.289 32 H -0.287 1.287 33 H 0.194 0.806 34 H 0.167 0.833 35 H 0.149 0.851 36 H 0.423 0.577 37 H 0.055 0.945 38 H 0.056 0.944 39 H 0.084 0.916 40 H 0.077 0.923 41 H 0.198 0.802 42 H 0.162 0.838 43 H 0.198 0.802 44 H 0.095 0.905 45 H 0.109 0.891 46 H 0.135 0.865 47 H 0.146 0.854 48 H 0.138 0.862 49 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.639 2.073 0.288 9.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.167 4.167 3 Si 0.687 3.313 4 C -0.190 4.190 5 C -0.051 4.051 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.273 3.727 9 O -0.457 6.457 10 N -0.361 5.361 11 C 0.011 3.989 12 C -0.116 4.116 13 H 0.151 0.849 14 C -0.179 4.179 15 C 0.022 3.978 16 H 0.145 0.855 17 N -0.149 5.149 18 C -0.094 4.094 19 C -0.320 4.320 20 C -0.154 4.154 21 N -0.163 5.163 22 C -0.166 4.166 23 C -0.014 4.014 24 C -0.154 4.154 25 C -0.127 4.127 26 C -0.173 4.173 27 C -0.106 4.106 28 C -0.123 4.123 29 H 0.239 0.761 30 H 0.096 0.904 31 H -0.217 1.217 32 H -0.214 1.214 33 H 0.211 0.789 34 H 0.184 0.816 35 H 0.166 0.834 36 H 0.262 0.738 37 H 0.073 0.927 38 H 0.075 0.925 39 H 0.103 0.897 40 H 0.095 0.905 41 H 0.215 0.785 42 H 0.179 0.821 43 H 0.215 0.785 44 H 0.113 0.887 45 H 0.128 0.872 46 H 0.153 0.847 47 H 0.164 0.836 48 H 0.155 0.845 49 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 9.522 1.488 -0.918 9.681 hybrid contribution -1.991 0.463 0.610 2.134 sum 7.530 1.950 -0.308 7.785 Atomic orbital electron populations 1.86623 1.19666 1.80645 1.50543 1.24493 0.83096 1.12115 0.96955 0.94246 0.89607 0.70620 0.76863 1.19762 1.09741 0.91477 0.98010 1.21923 1.00008 0.94933 0.88279 1.43405 1.53391 1.03730 1.14372 1.22031 0.93665 1.09481 0.78467 1.21549 0.90435 0.76070 0.84652 1.90830 1.22699 1.50275 1.81902 1.45740 1.12053 1.72434 1.05855 1.21211 0.90183 1.01311 0.86179 1.22506 0.99983 0.97252 0.91828 0.84925 1.23430 0.98952 0.98360 0.97170 1.23214 0.92753 0.86763 0.95082 0.85537 1.48982 1.38207 1.23015 1.04706 1.22957 0.96181 0.89851 1.00432 1.21882 1.10801 1.06810 0.92550 1.24353 0.97129 0.93447 1.00431 1.77301 1.20285 1.22278 0.96486 1.23577 1.04547 0.96899 0.91538 1.18418 1.01905 0.87071 0.94049 1.20259 1.05053 0.88978 1.01086 1.21145 0.98154 0.99051 0.94310 1.20925 1.02304 0.96996 0.97039 1.20447 0.98871 0.91639 0.99659 1.19373 1.03941 0.93742 0.95212 0.76130 0.90364 1.21651 1.21375 0.78918 0.81569 0.83355 0.73814 0.92708 0.92540 0.89704 0.90452 0.78482 0.82064 0.78483 0.88673 0.87228 0.84721 0.83590 0.84456 0.86173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -4.67 12.86 -148.98 -1.92 -6.58 16 2 C -0.06 -0.24 3.05 71.23 0.22 -0.03 16 3 Si 0.78 -1.04 30.79 68.60 2.11 1.08 16 4 C -0.18 -1.43 5.61 -18.63 -0.10 -1.53 16 5 C 0.07 0.25 9.89 83.00 0.82 1.07 16 6 N -0.47 -1.20 2.27 -519.98 -1.18 -2.38 16 7 C 0.09 -0.67 6.48 85.63 0.56 -0.11 16 8 C 0.49 -0.59 7.90 87.66 0.69 0.11 16 9 O -0.58 -7.14 16.42 -3.05 -0.05 -7.19 16 10 N -0.71 6.26 5.56 -463.05 -2.57 3.69 16 11 C 0.14 -0.77 5.50 86.38 0.48 -0.29 16 12 C -0.10 1.05 3.75 -10.27 -0.04 1.01 16 13 H 0.13 -2.01 8.14 -2.39 -0.02 -2.03 16 14 C -0.14 0.72 7.44 31.12 0.23 0.96 16 15 C 0.12 -0.52 5.04 45.58 0.23 -0.29 16 16 H 0.13 -0.64 8.14 -2.39 -0.02 -0.66 16 17 N -0.37 -1.06 3.81 -324.71 -1.24 -2.30 16 18 C 0.05 0.03 10.69 83.54 0.89 0.92 16 19 C -0.29 -0.76 10.80 21.99 0.24 -0.52 16 20 C 0.03 0.17 12.03 85.24 1.03 1.19 16 21 N -0.34 -3.00 12.58 -57.03 -0.72 -3.72 16 22 C -0.13 1.36 7.00 31.18 0.22 1.58 16 23 C 0.09 0.72 6.80 39.03 0.27 0.99 16 24 C -0.13 -0.71 10.00 22.37 0.22 -0.49 16 25 C -0.11 -0.53 10.01 22.30 0.22 -0.30 16 26 C -0.15 -1.01 9.97 22.03 0.22 -0.79 16 27 C -0.09 -0.85 10.05 22.23 0.22 -0.63 16 28 C -0.12 -1.30 6.35 -20.20 -0.13 -1.43 16 29 H 0.39 -0.28 8.74 -74.06 -0.65 -0.93 16 30 H 0.08 0.12 7.96 -2.39 -0.02 0.10 16 31 H -0.29 -1.21 7.04 99.48 0.70 -0.50 16 32 H -0.29 -0.81 7.11 99.48 0.71 -0.11 16 33 H 0.19 -0.59 6.30 -2.91 -0.02 -0.61 16 34 H 0.17 -2.72 8.12 -2.39 -0.02 -2.74 16 35 H 0.15 -2.00 8.14 -2.39 -0.02 -2.02 16 36 H 0.42 -7.28 8.47 -92.71 -0.79 -8.06 16 37 H 0.05 -0.05 8.14 -2.38 -0.02 -0.07 16 38 H 0.06 -0.11 7.87 -2.39 -0.02 -0.13 16 39 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 40 H 0.08 -0.12 8.10 -2.39 -0.02 -0.14 16 41 H 0.20 -1.24 6.69 -2.91 -0.02 -1.26 16 42 H 0.16 -0.22 8.06 -2.91 -0.02 -0.24 16 43 H 0.20 0.00 8.06 -2.91 -0.02 -0.03 16 44 H 0.09 -0.95 6.10 -2.39 -0.01 -0.97 16 45 H 0.11 -1.57 8.14 -2.39 -0.02 -1.59 16 46 H 0.13 0.00 8.06 -2.91 -0.02 -0.02 16 47 H 0.15 -0.07 8.06 -2.91 -0.02 -0.09 16 48 H 0.14 0.30 8.06 -2.91 -0.02 0.28 16 49 H 0.12 0.95 8.06 -2.91 -0.02 0.93 16 Total: 0.00 -37.82 412.34 0.51 -37.31 By element: Atomic # 1 Polarization: -20.91 SS G_CDS: -0.41 Total: -21.32 kcal Atomic # 6 Polarization: -5.07 SS G_CDS: 6.48 Total: 1.41 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -5.71 Total: -4.71 kcal Atomic # 8 Polarization: -11.81 SS G_CDS: -1.97 Total: -13.77 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: 2.11 Total: 1.08 kcal Total: -37.82 0.51 -37.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 154.265 kcal (2) G-P(sol) polarization free energy of solvation -37.817 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.307 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds