Wall clock time and date at job start Sun Mar 7 2021 07:48:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42903 * 109.47147 * 2 1 4 4 C 1.35902 * 116.99837 * 84.94713 * 3 2 1 5 5 C 1.38736 * 120.05157 * 174.27923 * 4 3 2 6 6 C 1.38151 * 119.93928 * 179.74434 * 5 4 3 7 7 C 1.38264 * 120.05546 * 0.50287 * 6 5 4 8 8 C 1.50706 * 119.94150 * 179.74651 * 7 6 5 9 9 O 1.42904 * 109.47032 * 245.01976 * 8 7 6 10 10 Si 1.86294 * 109.47160 * 5.02165 * 8 7 6 11 11 C 1.38265 * 120.11503 * 359.77002 * 7 6 5 12 12 C 1.38146 * 120.05095 * 359.97438 * 11 7 6 13 13 C 1.50693 * 109.47745 * 239.99706 * 2 1 3 14 14 O 1.21277 * 120.00217 * 114.99658 * 13 2 1 15 15 N 1.34778 * 120.00282 * 295.00625 * 13 2 1 16 16 C 1.46497 * 120.00372 * 179.97438 * 15 13 2 17 17 C 1.53001 * 109.46950 * 179.97438 * 16 15 13 18 18 H 1.08999 * 112.85177 * 316.19697 * 17 16 15 19 19 C 1.53778 * 113.61667 * 87.50393 * 17 16 15 20 20 C 1.53776 * 87.08237 * 139.97898 * 19 17 16 21 21 H 1.09002 * 113.61832 * 89.11890 * 20 19 17 22 22 N 1.46508 * 113.69058 * 220.00640 * 20 19 17 23 23 C 1.36876 * 126.39898 * 217.25101 * 22 20 19 24 24 C 1.34664 * 106.81603 * 179.84368 * 23 22 20 25 25 N 1.34124 * 108.02483 * 0.41998 * 24 23 22 26 26 C 1.30504 * 109.25047 * 359.73179 * 25 24 23 27 27 C 1.53775 * 87.08192 * 334.56712 * 20 19 17 28 28 H 1.08998 * 109.47055 * 179.97438 * 1 2 3 29 29 H 1.09007 * 109.46907 * 60.00267 * 1 2 3 30 30 H 1.08997 * 109.47715 * 300.00621 * 1 2 3 31 31 H 1.09007 * 109.46907 * 119.99733 * 2 1 3 32 32 H 1.07994 * 120.02723 * 359.97438 * 5 4 3 33 33 H 1.08004 * 119.97038 * 180.27524 * 6 5 4 34 34 H 1.08997 * 109.46712 * 125.02694 * 8 7 6 35 35 H 0.96706 * 113.99140 * 60.00401 * 9 8 7 36 36 H 1.48504 * 109.99900 * 179.97438 * 10 8 7 37 37 H 1.48493 * 110.00321 * 301.32232 * 10 8 7 38 38 H 1.07996 * 119.97327 * 179.97438 * 11 7 6 39 39 H 1.08007 * 120.02206 * 179.97438 * 12 11 7 40 40 H 0.97010 * 119.99692 * 359.97438 * 15 13 2 41 41 H 1.09000 * 109.47095 * 299.99491 * 16 15 13 42 42 H 1.08995 * 109.46913 * 60.00072 * 16 15 13 43 43 H 1.09005 * 113.61432 * 254.52938 * 19 17 16 44 44 H 1.09001 * 113.61483 * 25.42566 * 19 17 16 45 45 H 1.08005 * 126.58910 * 359.97438 * 23 22 20 46 46 H 1.08011 * 125.98736 * 180.11678 * 24 23 22 47 47 H 1.08005 * 125.64386 * 179.97438 * 26 25 24 48 48 H 1.09000 * 113.61739 * 270.88737 * 27 20 19 49 49 H 1.09003 * 113.69019 * 139.99290 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9645 1.2062 5 6 2.6775 3.2281 1.2931 6 6 2.7784 3.8556 2.5197 7 6 2.3253 3.2211 3.6615 8 6 2.4418 3.9056 4.9990 9 8 3.3408 3.1718 5.8329 10 14 3.0906 5.6351 4.7571 11 6 1.7659 1.9594 3.5783 12 6 1.6579 1.3299 2.3534 13 6 2.0324 -0.7104 -1.2303 14 8 2.6531 -0.0980 -2.0733 15 7 1.7920 -2.0264 -1.3941 16 6 2.2800 -2.7169 -2.5904 17 6 1.8758 -4.1913 -2.5288 18 1 2.0344 -4.6329 -1.5449 19 6 0.4824 -4.4731 -3.1151 20 6 1.0841 -5.7494 -3.7264 21 1 1.0251 -6.6178 -3.0702 22 7 0.6130 -6.0301 -5.0850 23 6 0.3452 -7.2642 -5.6131 24 6 -0.0635 -7.0651 -6.8807 25 7 -0.0370 -5.7462 -7.1230 26 6 0.3672 -5.1199 -6.0518 27 6 2.4450 -5.0348 -3.6817 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3634 0.5139 0.8899 31 1 1.8933 -0.5138 0.8901 32 1 3.0356 3.7223 0.4021 33 1 3.2149 4.8412 2.5873 34 1 1.4606 3.9484 5.4719 35 1 4.2352 3.0935 5.4736 36 1 3.2095 6.3211 6.0688 37 1 4.4136 5.5917 4.0842 38 1 1.4130 1.4657 4.4717 39 1 1.2212 0.3441 2.2890 40 1 1.2958 -2.5164 -0.7197 41 1 1.8450 -2.2574 -3.4780 42 1 3.3662 -2.6400 -2.6366 43 1 -0.2783 -4.6678 -2.3589 44 1 0.1648 -3.7410 -3.8575 45 1 0.4411 -8.2146 -5.1092 46 1 -0.3562 -7.8334 -7.5812 47 1 0.4860 -4.0508 -5.9549 48 1 2.6641 -4.4563 -4.5791 49 1 3.2699 -5.6820 -3.3834 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:48:11 Heat of formation + Delta-G solvation = 23.470817 kcal Electronic energy + Delta-G solvation = -30479.604112 eV Core-core repulsion = 26183.141779 eV Total energy + Delta-G solvation = -4296.462333 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.13582 -41.83580 -40.86616 -40.07764 -39.04141 -37.28648 -35.91727 -33.85194 -33.15251 -32.10606 -31.50576 -30.34843 -29.07152 -27.23100 -26.76022 -25.63661 -24.62486 -23.97174 -22.55409 -22.46475 -21.97815 -21.44064 -20.41426 -19.56993 -19.03842 -18.40295 -18.10005 -17.39441 -17.10713 -16.87091 -16.60871 -16.39324 -16.22174 -16.09046 -15.92292 -15.58642 -15.29013 -15.09468 -14.86181 -14.77196 -14.56318 -14.48083 -14.39003 -14.24435 -13.95064 -13.77631 -13.61677 -13.56127 -13.34595 -13.24587 -13.03026 -12.48880 -12.23950 -12.18129 -12.15140 -12.07913 -11.95652 -11.58058 -10.90615 -10.87488 -10.60222 -10.51782 -10.33302 -10.08724 -9.43745 -9.25176 -4.97033 0.20206 0.30226 1.07916 1.27627 1.36530 1.39560 1.58111 1.74631 1.95239 2.29923 2.35735 2.60813 2.92417 3.00083 3.26068 3.27712 3.35737 3.36726 3.49143 3.63364 3.67081 3.67781 3.78925 3.79857 3.80738 3.89616 3.94438 4.15425 4.18402 4.21317 4.27700 4.33620 4.35447 4.40215 4.45823 4.53787 4.54085 4.57789 4.60527 4.60825 4.78514 4.82933 4.89122 4.94292 5.12400 5.15312 5.24953 5.33729 5.43741 5.61262 5.83229 6.12469 6.22893 6.30157 6.38394 6.97599 7.18119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.142 4.142 6 C -0.076 4.076 7 C -0.155 4.155 8 C -0.069 4.069 9 O -0.531 6.531 10 Si 0.683 3.317 11 C -0.050 4.050 12 C -0.212 4.212 13 C 0.518 3.482 14 O -0.510 6.510 15 N -0.727 5.727 16 C 0.132 3.868 17 C -0.121 4.121 18 H 0.107 0.893 19 C -0.140 4.140 20 C 0.108 3.892 21 H 0.125 0.875 22 N -0.450 5.450 23 C -0.057 4.057 24 C -0.029 4.029 25 N -0.493 5.493 26 C 0.181 3.819 27 C -0.136 4.136 28 H 0.079 0.921 29 H 0.077 0.923 30 H 0.079 0.921 31 H 0.100 0.900 32 H 0.137 0.863 33 H 0.134 0.866 34 H 0.117 0.883 35 H 0.376 0.624 36 H -0.257 1.257 37 H -0.260 1.260 38 H 0.129 0.871 39 H 0.131 0.869 40 H 0.402 0.598 41 H 0.075 0.925 42 H 0.076 0.924 43 H 0.084 0.916 44 H 0.096 0.904 45 H 0.173 0.827 46 H 0.170 0.830 47 H 0.200 0.800 48 H 0.097 0.903 49 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.087 -3.258 4.683 6.075 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.007 3.993 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.160 4.160 6 C -0.094 4.094 7 C -0.156 4.156 8 C -0.179 4.179 9 O -0.338 6.338 10 Si 0.585 3.415 11 C -0.069 4.069 12 C -0.230 4.230 13 C 0.302 3.698 14 O -0.383 6.383 15 N -0.381 5.381 16 C 0.009 3.991 17 C -0.140 4.140 18 H 0.125 0.875 19 C -0.178 4.178 20 C 0.005 3.995 21 H 0.143 0.857 22 N -0.133 5.133 23 C -0.190 4.190 24 C -0.177 4.177 25 N -0.211 5.211 26 C -0.101 4.101 27 C -0.174 4.174 28 H 0.098 0.902 29 H 0.096 0.904 30 H 0.098 0.902 31 H 0.117 0.883 32 H 0.155 0.845 33 H 0.152 0.848 34 H 0.135 0.865 35 H 0.223 0.777 36 H -0.182 1.182 37 H -0.185 1.185 38 H 0.147 0.853 39 H 0.149 0.851 40 H 0.237 0.763 41 H 0.093 0.907 42 H 0.094 0.906 43 H 0.103 0.897 44 H 0.115 0.885 45 H 0.191 0.809 46 H 0.187 0.813 47 H 0.217 0.783 48 H 0.115 0.885 49 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.641 -1.802 3.787 4.504 hybrid contribution 0.718 -1.827 1.424 2.426 sum -0.923 -3.630 5.212 6.418 Atomic orbital electron populations 1.22353 0.92183 1.03907 1.05013 1.22180 0.95998 0.83293 0.97855 1.86228 1.80903 1.25405 1.27048 1.19085 0.95088 0.92887 0.83972 1.20421 1.03164 0.93653 0.98780 1.20893 0.97901 0.99120 0.91488 1.20183 1.03510 0.96574 0.95315 1.24940 0.98174 1.04967 0.89866 1.86598 1.24282 1.75095 1.47788 0.94979 0.85371 0.77893 0.83273 1.20800 0.95482 0.93670 0.96898 1.21316 1.07283 1.01794 0.92654 1.20089 0.80036 0.82108 0.87540 1.90791 1.38581 1.65614 1.43321 1.45817 1.58798 1.09004 1.24486 1.21361 1.00211 0.89838 0.87679 1.22641 0.96546 0.94922 0.99863 0.87495 1.23564 0.97175 0.96261 1.00822 1.23042 0.96006 0.99125 0.81355 0.85724 1.45571 1.49128 1.07016 1.11551 1.22785 1.09718 0.89397 0.97088 1.22374 1.06384 0.93575 0.95378 1.70346 1.19143 1.05960 1.25635 1.24862 1.03910 0.97236 0.84074 1.23447 0.96530 0.98328 0.99132 0.90245 0.90363 0.90187 0.88273 0.84473 0.84849 0.86514 0.77668 1.18227 1.18488 0.85298 0.85115 0.76339 0.90706 0.90603 0.89697 0.88508 0.80931 0.81315 0.78306 0.88457 0.89532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.57 9.13 37.16 0.34 0.91 16 2 C 0.07 -0.08 2.63 -27.89 -0.07 -0.15 16 3 O -0.28 -0.64 9.34 -39.29 -0.37 -1.01 16 4 C 0.14 0.16 6.60 -39.22 -0.26 -0.09 16 5 C -0.14 -0.13 9.99 -39.43 -0.39 -0.53 16 6 C -0.08 0.01 8.66 -39.60 -0.34 -0.33 16 7 C -0.16 0.02 5.35 -104.60 -0.56 -0.54 16 8 C -0.07 0.04 2.80 36.01 0.10 0.14 16 9 O -0.53 -0.50 12.83 -35.23 -0.45 -0.95 16 10 Si 0.68 -0.72 29.88 -169.99 -5.08 -5.80 16 11 C -0.05 0.01 9.68 -39.61 -0.38 -0.37 16 12 C -0.21 0.10 8.24 -39.43 -0.33 -0.22 16 13 C 0.52 0.26 7.18 -10.99 -0.08 0.18 16 14 O -0.51 -2.84 16.51 -14.30 -0.24 -3.08 16 15 N -0.73 2.42 5.52 -60.30 -0.33 2.09 16 16 C 0.13 -0.44 5.51 -4.04 -0.02 -0.46 16 17 C -0.12 0.68 3.75 -89.81 -0.34 0.35 16 18 H 0.11 -0.74 8.14 -51.93 -0.42 -1.16 16 19 C -0.14 0.72 7.19 -25.92 -0.19 0.53 16 20 C 0.11 -0.44 4.64 -67.12 -0.31 -0.75 16 21 H 0.12 -0.67 8.14 -51.93 -0.42 -1.09 16 22 N -0.45 0.33 2.94 -110.59 -0.33 0.00 16 23 C -0.06 -0.01 11.58 -16.57 -0.19 -0.20 16 24 C -0.03 -0.07 11.87 -17.82 -0.21 -0.28 16 25 N -0.49 -2.13 11.25 -14.66 -0.16 -2.29 16 26 C 0.18 0.21 11.37 -90.38 -1.03 -0.82 16 27 C -0.14 0.62 7.32 -25.92 -0.19 0.43 16 28 H 0.08 -0.46 7.92 -51.93 -0.41 -0.87 16 29 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.08 -0.27 6.91 -51.93 -0.36 -0.63 16 31 H 0.10 -0.34 6.31 -51.93 -0.33 -0.67 16 32 H 0.14 0.04 8.06 -52.49 -0.42 -0.38 16 33 H 0.13 -0.24 4.83 -52.48 -0.25 -0.50 16 34 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 35 H 0.38 -0.64 8.70 45.56 0.40 -0.25 16 36 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 37 H -0.26 -0.23 7.00 56.52 0.40 0.16 16 38 H 0.13 -0.15 8.06 -52.49 -0.42 -0.58 16 39 H 0.13 -0.37 5.43 -52.48 -0.29 -0.65 16 40 H 0.40 -2.59 8.26 -40.82 -0.34 -2.92 16 41 H 0.07 -0.17 7.84 -51.93 -0.41 -0.57 16 42 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.08 -0.49 8.14 -51.93 -0.42 -0.91 16 44 H 0.10 -0.42 6.69 -51.93 -0.35 -0.77 16 45 H 0.17 -0.47 8.06 -52.48 -0.42 -0.89 16 46 H 0.17 0.10 8.06 -52.48 -0.42 -0.32 16 47 H 0.20 -0.33 7.44 -52.48 -0.39 -0.72 16 48 H 0.10 -0.34 7.86 -51.93 -0.41 -0.75 16 49 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 LS Contribution 403.13 15.07 6.08 6.08 Total: 0.00 -12.03 403.13 -12.31 -24.35 By element: Atomic # 1 Polarization: -10.20 SS G_CDS: -6.98 Total: -17.18 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -4.45 Total: -2.20 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -0.82 Total: -0.21 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -1.06 Total: -5.04 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: -5.08 Total: -5.80 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -12.03 -12.31 -24.35 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.818 kcal (2) G-P(sol) polarization free energy of solvation -12.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.313 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.347 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds