Wall clock time and date at job start Sun Mar 7 2021 07:48:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37647 * 125.67991 * 2 1 4 4 C 1.46679 * 126.23047 * 0.03703 * 3 2 1 5 5 O 1.21685 * 120.00427 * 354.47625 * 4 3 2 6 6 N 1.34782 * 119.99843 * 174.47461 * 4 3 2 7 7 C 1.46496 * 120.00077 * 185.08714 * 6 4 3 8 8 C 1.52999 * 109.46980 * 180.02562 * 7 6 4 9 9 H 1.09004 * 112.84745 * 45.33517 * 8 7 6 10 10 C 1.53781 * 113.61631 * 176.53055 * 8 7 6 11 11 C 1.53771 * 87.08218 * 139.98109 * 10 8 7 12 12 H 1.08997 * 113.61767 * 89.11987 * 11 10 8 13 13 N 1.46507 * 113.61543 * 219.93463 * 11 10 8 14 14 C 1.36881 * 126.39769 * 239.71623 * 13 11 10 15 15 C 1.34667 * 106.81655 * 179.83864 * 14 13 11 16 16 N 1.34134 * 108.01858 * 0.42402 * 15 14 13 17 17 C 1.30496 * 109.25782 * 359.73036 * 16 15 14 18 18 C 1.53781 * 113.61714 * 274.13524 * 8 7 6 19 19 C 1.37872 * 107.53452 * 180.02562 * 3 2 1 20 20 C 1.39831 * 107.08356 * 359.97438 * 19 3 2 21 21 C 1.35457 * 107.86963 * 0.02562 * 20 19 3 22 22 C 1.50698 * 125.56892 * 180.02562 * 21 20 19 23 23 O 1.42896 * 109.46816 * 210.02243 * 22 21 20 24 24 Si 1.86301 * 109.46811 * 330.01717 * 22 21 20 25 25 H 1.09001 * 109.46940 * 94.55753 * 1 2 3 26 26 H 1.09000 * 109.47236 * 214.56017 * 1 2 3 27 27 H 1.09002 * 109.47077 * 334.56045 * 1 2 3 28 28 H 0.97006 * 119.99760 * 5.08778 * 6 4 3 29 29 H 1.08995 * 109.47571 * 300.00018 * 7 6 4 30 30 H 1.09001 * 109.46819 * 60.00244 * 7 6 4 31 31 H 1.08999 * 113.61365 * 254.53508 * 10 8 7 32 32 H 1.09001 * 113.61091 * 25.43294 * 10 8 7 33 33 H 1.07999 * 126.59025 * 359.97438 * 14 13 11 34 34 H 1.08000 * 125.99408 * 180.18388 * 15 14 13 35 35 H 1.07993 * 125.65126 * 179.97438 * 17 16 15 36 36 H 1.09005 * 113.61275 * 334.57294 * 18 8 7 37 37 H 1.09002 * 113.61372 * 105.47047 * 18 8 7 38 38 H 1.07995 * 126.45541 * 180.02562 * 19 3 2 39 39 H 1.08005 * 126.06778 * 179.73814 * 20 19 3 40 40 H 1.08996 * 109.47026 * 90.01659 * 22 21 20 41 41 H 0.96701 * 113.99610 * 179.97438 * 23 22 21 42 42 H 1.48496 * 110.00126 * 300.00388 * 24 22 21 43 43 H 1.48508 * 109.99879 * 61.32391 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8124 2.5124 0.0008 5 8 0.6264 2.7652 -0.1000 6 7 2.7077 3.5137 0.1131 7 6 2.2463 4.8995 0.2260 8 6 3.4544 5.8315 0.3393 9 1 4.2390 5.5967 -0.3800 10 6 3.0805 7.3227 0.3782 11 6 4.1774 7.4891 1.4430 12 1 5.1606 7.7078 1.0266 13 7 3.8059 8.3969 2.5313 14 6 4.4561 9.5478 2.8867 15 6 3.7816 10.0705 3.9285 16 7 2.7531 9.2559 4.2077 17 6 2.7614 8.2513 3.3749 18 6 3.9688 6.0012 1.7785 19 6 3.5780 0.6887 -0.0006 20 6 3.5521 -0.7093 -0.0003 21 6 2.2554 -1.1010 -0.0002 22 6 1.7707 -2.5279 0.0006 23 8 0.5131 -2.6041 -0.6735 24 14 3.0117 -3.6057 -0.8764 25 1 -0.3633 -0.0817 -1.0244 26 1 -0.3634 -0.8463 0.5830 27 1 -0.3633 0.9280 0.4415 28 1 3.6575 3.3166 0.1191 29 1 1.6665 5.1627 -0.6585 30 1 1.6223 5.0034 1.1137 31 1 3.2914 7.8501 -0.5521 32 1 2.0749 7.5110 0.7542 33 1 5.3389 9.9589 2.4198 34 1 4.0279 10.9834 4.4505 35 1 2.0510 7.4381 3.3626 36 1 3.2064 5.8275 2.5380 37 1 4.8958 5.4634 1.9771 38 1 4.4584 1.3143 -0.0004 39 1 4.4132 -1.3613 -0.0047 40 1 1.6535 -2.8712 1.0284 41 1 0.1407 -3.4957 -0.7116 42 1 3.1806 -3.1479 -2.2789 43 1 4.3154 -3.5601 -0.1667 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:48:20 Heat of formation + Delta-G solvation = 80.212688 kcal Electronic energy + Delta-G solvation = -25735.168616 eV Core-core repulsion = 21978.186836 eV Total energy + Delta-G solvation = -3756.981780 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -43.09837 -42.58065 -40.70815 -39.68630 -37.79943 -35.89498 -33.89456 -33.39994 -31.74184 -30.31799 -29.17192 -27.43415 -27.17995 -26.56703 -24.55821 -23.05949 -22.49740 -21.91304 -21.44980 -20.58458 -20.12230 -19.02400 -18.49130 -18.21629 -17.28087 -17.09020 -16.75391 -16.62114 -16.09090 -16.05359 -15.46784 -15.27353 -15.10198 -14.87540 -14.81944 -14.52701 -14.39605 -14.27734 -13.89581 -13.86391 -13.65540 -13.57499 -13.33809 -13.18018 -13.01623 -12.76219 -12.41018 -12.03868 -11.95953 -11.90020 -11.02861 -10.84842 -10.68976 -10.48305 -10.23890 -9.78186 -9.40825 -9.11149 -5.07659 0.38484 1.07780 1.11321 1.49187 1.61907 1.68805 1.79148 1.99613 2.30361 2.32750 2.35632 2.98218 3.04370 3.08849 3.32475 3.35822 3.62039 3.68893 3.76387 3.83251 3.95531 3.96715 3.99301 4.22953 4.23849 4.30419 4.32975 4.40363 4.46257 4.51216 4.51987 4.57905 4.63650 4.67317 4.81847 4.82931 4.90969 4.95217 5.06076 5.26862 5.37490 5.65075 5.86150 5.95579 6.11393 6.26038 6.36585 6.40573 7.11482 7.20878 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.386 5.386 3 C -0.053 4.053 4 C 0.592 3.408 5 O -0.543 6.543 6 N -0.719 5.719 7 C 0.135 3.865 8 C -0.121 4.121 9 H 0.107 0.893 10 C -0.135 4.135 11 C 0.108 3.892 12 H 0.125 0.875 13 N -0.449 5.449 14 C -0.057 4.057 15 C -0.030 4.030 16 N -0.494 5.494 17 C 0.181 3.819 18 C -0.140 4.140 19 C -0.135 4.135 20 C -0.213 4.213 21 C 0.062 3.938 22 C -0.054 4.054 23 O -0.551 6.551 24 Si 0.716 3.284 25 H 0.079 0.921 26 H 0.088 0.912 27 H 0.097 0.903 28 H 0.404 0.596 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.086 0.914 32 H 0.097 0.903 33 H 0.173 0.827 34 H 0.170 0.830 35 H 0.200 0.800 36 H 0.096 0.904 37 H 0.085 0.915 38 H 0.147 0.853 39 H 0.145 0.855 40 H 0.081 0.919 41 H 0.388 0.612 42 H -0.253 1.253 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.585 -5.303 -2.089 6.733 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 N -0.057 5.057 3 C -0.167 4.167 4 C 0.380 3.620 5 O -0.422 6.422 6 N -0.372 5.372 7 C 0.011 3.989 8 C -0.140 4.140 9 H 0.125 0.875 10 C -0.173 4.173 11 C 0.005 3.995 12 H 0.143 0.857 13 N -0.132 5.132 14 C -0.190 4.190 15 C -0.178 4.178 16 N -0.211 5.211 17 C -0.101 4.101 18 C -0.178 4.178 19 C -0.161 4.161 20 C -0.237 4.237 21 C -0.057 4.057 22 C -0.164 4.164 23 O -0.358 6.358 24 Si 0.615 3.385 25 H 0.098 0.902 26 H 0.107 0.893 27 H 0.116 0.884 28 H 0.239 0.761 29 H 0.094 0.906 30 H 0.091 0.909 31 H 0.105 0.895 32 H 0.115 0.885 33 H 0.191 0.809 34 H 0.187 0.813 35 H 0.217 0.783 36 H 0.114 0.886 37 H 0.104 0.896 38 H 0.165 0.835 39 H 0.162 0.838 40 H 0.099 0.901 41 H 0.237 0.763 42 H -0.177 1.177 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 2.632 -4.404 -2.098 5.543 hybrid contribution 1.035 0.341 -0.374 1.153 sum 3.667 -4.063 -2.472 6.005 Atomic orbital electron populations 1.22294 0.75076 1.04819 1.04357 1.43771 1.07315 1.03845 1.50806 1.20011 0.90460 0.87544 1.18682 1.16925 0.85515 0.83462 0.76116 1.90813 1.16349 1.84769 1.50254 1.45561 1.09916 1.06152 1.75534 1.21333 0.95581 0.78998 1.02955 1.22641 0.98490 0.95036 0.97823 0.87470 1.23432 0.99550 0.94955 0.99397 1.23083 1.00312 0.89138 0.87017 0.85717 1.45578 1.22844 1.19193 1.25603 1.22786 1.02660 0.90789 1.02728 1.22373 0.94920 1.01612 0.98882 1.70341 1.22025 1.03919 1.24848 1.24852 0.93585 1.00988 0.90642 1.23590 1.03189 0.93807 0.97247 1.21220 0.94477 0.94854 1.05522 1.20524 0.94731 0.95594 1.12803 1.20108 0.90478 0.87303 1.07803 1.24531 0.94580 0.95541 1.01712 1.86457 1.35131 1.35108 1.79090 0.95424 0.77586 0.85889 0.79592 0.90249 0.89339 0.88425 0.76111 0.90575 0.90873 0.89524 0.88489 0.80931 0.81319 0.78333 0.88572 0.89647 0.83518 0.83771 0.90125 0.76342 1.17728 1.17796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.18 9.27 59.85 0.56 0.73 16 2 N -0.39 -1.36 3.16 -115.61 -0.37 -1.72 16 3 C -0.05 -0.16 6.88 -81.98 -0.56 -0.73 16 4 C 0.59 1.75 7.77 -12.85 -0.10 1.65 16 5 O -0.54 -3.28 14.65 5.20 0.08 -3.21 16 6 N -0.72 0.65 5.54 -61.62 -0.34 0.31 16 7 C 0.13 -0.26 5.50 -4.04 -0.02 -0.28 16 8 C -0.12 0.54 3.75 -89.81 -0.34 0.20 16 9 H 0.11 -0.59 8.14 -51.93 -0.42 -1.01 16 10 C -0.13 0.50 7.32 -25.92 -0.19 0.31 16 11 C 0.11 -0.35 4.64 -67.03 -0.31 -0.66 16 12 H 0.12 -0.57 8.14 -51.93 -0.42 -0.99 16 13 N -0.45 0.03 2.95 -110.51 -0.33 -0.29 16 14 C -0.06 -0.04 11.58 -16.56 -0.19 -0.23 16 15 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 16 N -0.49 -2.37 11.25 -14.67 -0.17 -2.53 16 17 C 0.18 0.31 11.38 -90.38 -1.03 -0.72 16 18 C -0.14 0.56 7.20 -25.83 -0.19 0.38 16 19 C -0.13 -0.19 10.35 -39.12 -0.41 -0.59 16 20 C -0.21 -0.45 9.37 -39.98 -0.37 -0.83 16 21 C 0.06 0.16 6.18 -81.95 -0.51 -0.35 16 22 C -0.05 0.04 2.89 36.00 0.10 0.15 16 23 O -0.55 0.68 10.47 -35.23 -0.37 0.31 16 24 Si 0.72 -1.40 31.22 -169.99 -5.31 -6.71 16 25 H 0.08 0.21 8.14 -51.93 -0.42 -0.22 16 26 H 0.09 0.08 7.10 -51.93 -0.37 -0.29 16 27 H 0.10 0.32 6.19 -51.93 -0.32 0.00 16 28 H 0.40 -1.35 7.38 -40.82 -0.30 -1.65 16 29 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.07 -0.09 7.88 -51.93 -0.41 -0.50 16 31 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.10 -0.27 7.86 -51.93 -0.41 -0.68 16 33 H 0.17 -0.38 8.06 -52.49 -0.42 -0.80 16 34 H 0.17 0.17 8.06 -52.49 -0.42 -0.25 16 35 H 0.20 -0.20 7.45 -52.49 -0.39 -0.59 16 36 H 0.10 -0.31 6.72 -51.93 -0.35 -0.66 16 37 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 38 H 0.15 -0.28 7.45 -52.49 -0.39 -0.67 16 39 H 0.14 0.12 6.69 -52.48 -0.35 -0.23 16 40 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 41 H 0.39 -2.45 8.74 45.56 0.40 -2.05 16 42 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 43 H -0.25 -0.03 6.87 56.52 0.39 0.36 16 LS Contribution 355.57 15.07 5.36 5.36 Total: 0.00 -11.68 355.57 -11.11 -22.79 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -5.90 Total: -13.04 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -3.77 Total: -1.27 kcal Atomic # 7 Polarization: -3.04 SS G_CDS: -1.20 Total: -4.24 kcal Atomic # 8 Polarization: -2.60 SS G_CDS: -0.29 Total: -2.89 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.31 Total: -6.71 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -11.68 -11.11 -22.79 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.999 kcal (2) G-P(sol) polarization free energy of solvation -11.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.318 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.787 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds