Wall clock time and date at job start Sun Mar 7 2021 07:48:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35665 * 116.99778 * 2 1 4 4 C 1.38401 * 120.11933 * 0.02562 * 3 2 1 5 5 C 1.38722 * 120.03285 * 179.97438 * 4 3 2 6 6 O 1.35708 * 119.86515 * 180.02562 * 5 4 3 7 7 C 1.42901 * 117.00020 * 0.02562 * 6 5 4 8 8 C 1.39152 * 120.27210 * 0.04430 * 5 4 3 9 9 C 1.50697 * 119.87758 * 179.97438 * 8 5 4 10 10 O 1.42896 * 109.47164 * 284.99943 * 9 8 5 11 11 Si 1.86304 * 109.46832 * 165.00283 * 9 8 5 12 12 C 1.37581 * 120.23765 * 359.67496 * 8 5 4 13 13 C 1.39819 * 119.96634 * 0.57883 * 12 8 5 14 14 C 1.47304 * 120.13708 * 179.71573 * 13 12 8 15 15 O 1.21620 * 119.99755 * 179.72833 * 14 13 12 16 16 N 1.34774 * 119.99864 * 359.72546 * 14 13 12 17 17 C 1.46497 * 119.99932 * 179.97438 * 16 14 13 18 18 C 1.52998 * 109.47203 * 180.02562 * 17 16 14 19 19 H 1.09008 * 112.84868 * 316.19908 * 18 17 16 20 20 C 1.53775 * 113.69017 * 87.47048 * 18 17 16 21 21 C 1.53779 * 87.08438 * 139.99386 * 20 18 17 22 22 H 1.09002 * 113.61731 * 89.11293 * 21 20 18 23 23 N 1.46500 * 113.68825 * 220.00754 * 21 20 18 24 24 C 1.36885 * 126.39384 * 219.05761 * 23 21 20 25 25 C 1.34672 * 106.81269 * 180.02562 * 24 23 21 26 26 N 1.34124 * 108.02489 * 0.02562 * 25 24 23 27 27 C 1.30506 * 109.25501 * 359.72119 * 26 25 24 28 28 C 1.53777 * 113.61649 * 185.00515 * 18 17 16 29 29 H 1.08993 * 109.47329 * 299.99747 * 1 2 3 30 30 H 1.09001 * 109.47426 * 59.99869 * 1 2 3 31 31 H 1.09002 * 109.47073 * 180.02562 * 1 2 3 32 32 H 1.08000 * 119.98280 * 359.97438 * 4 3 2 33 33 H 1.09000 * 109.46982 * 299.99526 * 7 6 5 34 34 H 1.08996 * 109.47286 * 60.00005 * 7 6 5 35 35 H 1.09004 * 109.46952 * 179.97438 * 7 6 5 36 36 H 1.09002 * 109.47556 * 45.00261 * 9 8 5 37 37 H 0.96700 * 114.00259 * 300.00487 * 10 9 8 38 38 H 1.48499 * 109.99999 * 58.68114 * 11 9 8 39 39 H 1.48502 * 109.99677 * 179.97438 * 11 9 8 40 40 H 1.08006 * 120.01734 * 180.29400 * 12 8 5 41 41 H 0.97004 * 120.00158 * 0.02562 * 16 14 13 42 42 H 1.09000 * 109.46697 * 60.00384 * 17 16 14 43 43 H 1.08997 * 109.47634 * 300.00373 * 17 16 14 44 44 H 1.08993 * 113.61636 * 25.43750 * 20 18 17 45 45 H 1.09008 * 113.61006 * 254.53993 * 20 18 17 46 46 H 1.08002 * 126.59412 * 0.04053 * 24 23 21 47 47 H 1.08005 * 125.98617 * 180.02562 * 25 24 23 48 48 H 1.07993 * 125.65109 * 180.29464 * 27 26 25 49 49 H 1.08997 * 113.61941 * 105.38293 * 28 18 17 50 50 H 1.09009 * 113.68972 * 334.49372 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2934 2.3711 0.0005 5 6 1.9250 3.6062 0.0011 6 8 1.1849 4.7437 0.0021 7 6 -0.2362 4.5930 0.0032 8 6 3.3144 3.6835 0.0001 9 6 3.9913 5.0300 0.0002 10 8 3.8928 5.6126 -1.3009 11 14 5.7864 4.8225 0.4534 12 6 4.0723 2.5353 0.0054 13 6 3.4461 1.2852 -0.0005 14 6 4.2539 0.0534 -0.0012 15 8 3.7066 -1.0327 -0.0013 16 7 5.5994 0.1300 -0.0017 17 6 6.4028 -1.0950 -0.0018 18 6 7.8888 -0.7305 -0.0018 19 1 8.1271 0.0746 -0.6970 20 6 8.4740 -0.5230 1.4050 21 6 9.7305 -1.2550 0.9048 22 1 10.4723 -0.5934 0.4574 23 7 10.3075 -2.1738 1.8892 24 6 11.6402 -2.3790 2.1251 25 6 11.7252 -3.2997 3.1043 26 7 10.4786 -3.6475 3.4563 27 6 9.6241 -2.9730 2.7365 28 6 8.8215 -1.9468 -0.1248 29 1 -0.3633 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 0.2148 2.3164 0.0005 33 1 -0.5440 4.0442 -0.8868 34 1 -0.5426 4.0434 0.8932 35 1 -0.7058 5.5767 0.0044 36 1 3.5058 5.6808 0.7274 37 1 4.3045 5.0862 -1.9998 38 1 6.4521 3.9118 -0.5124 39 1 6.4653 6.1432 0.4563 40 1 5.1504 2.5995 0.0095 41 1 6.0360 0.9963 -0.0012 42 1 6.1721 -1.6807 -0.8917 43 1 6.1728 -1.6806 0.8883 44 1 7.9364 -1.0616 2.1854 45 1 8.6489 0.5235 1.6552 46 1 12.4649 -1.8954 1.6227 47 1 12.6374 -3.6897 3.5313 48 1 8.5487 -3.0438 2.8054 49 1 9.2769 -2.0501 -1.1097 50 1 8.3801 -2.8756 0.2368 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:48:31 Heat of formation + Delta-G solvation = -6.006890 kcal Electronic energy + Delta-G solvation = -34131.436608 eV Core-core repulsion = 29515.013833 eV Total energy + Delta-G solvation = -4616.422774 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.06620 -42.09290 -40.75775 -40.15542 -39.56183 -38.53184 -37.05864 -35.64664 -33.46370 -32.28017 -31.92129 -30.28032 -29.15148 -29.03288 -28.04957 -27.12297 -26.16492 -25.03304 -24.11797 -22.74167 -22.44412 -21.86804 -21.45400 -20.40857 -20.06460 -18.95659 -18.60440 -18.07457 -17.83078 -17.28591 -17.15273 -16.90414 -16.62829 -16.44545 -16.35796 -16.03933 -15.99878 -15.83076 -15.73063 -15.41109 -15.14832 -14.90870 -14.60654 -14.41786 -14.36500 -14.31062 -14.02912 -13.85179 -13.64740 -13.50240 -13.27153 -13.17107 -12.80524 -12.65512 -12.58980 -12.37270 -12.26632 -11.98281 -11.86827 -11.84018 -11.71637 -10.81715 -10.75284 -10.60343 -10.44868 -10.09537 -9.94592 -9.37769 -9.17520 -5.09322 -0.24089 0.07561 1.14405 1.16826 1.38846 1.79217 1.80249 1.86335 2.01758 2.09232 2.12226 2.35629 2.66212 3.03223 3.12655 3.35425 3.36120 3.38765 3.41258 3.55425 3.68905 3.74608 3.79678 3.86525 3.94850 4.01861 4.02584 4.03048 4.06114 4.10544 4.11118 4.20033 4.29936 4.37895 4.40292 4.44608 4.48654 4.52073 4.57371 4.60968 4.71241 4.73437 4.73895 4.85096 4.90688 4.98982 5.01202 5.25841 5.37843 5.42499 5.89008 5.97130 6.24951 6.29373 6.40770 6.48930 7.24014 7.31768 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.314 4.314 5 C 0.224 3.776 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.195 4.195 9 C -0.058 4.058 10 O -0.523 6.523 11 Si 0.681 3.319 12 C -0.013 4.013 13 C -0.209 4.209 14 C 0.566 3.434 15 O -0.517 6.517 16 N -0.734 5.734 17 C 0.134 3.866 18 C -0.122 4.122 19 H 0.105 0.895 20 C -0.141 4.141 21 C 0.108 3.892 22 H 0.124 0.876 23 N -0.449 5.449 24 C -0.058 4.058 25 C -0.030 4.030 26 N -0.494 5.494 27 C 0.182 3.818 28 C -0.135 4.135 29 H 0.058 0.942 30 H 0.057 0.943 31 H 0.107 0.893 32 H 0.145 0.855 33 H 0.059 0.941 34 H 0.060 0.940 35 H 0.107 0.893 36 H 0.119 0.881 37 H 0.372 0.628 38 H -0.258 1.258 39 H -0.253 1.253 40 H 0.139 0.861 41 H 0.396 0.604 42 H 0.074 0.926 43 H 0.074 0.926 44 H 0.097 0.903 45 H 0.085 0.915 46 H 0.173 0.827 47 H 0.169 0.831 48 H 0.201 0.799 49 H 0.085 0.915 50 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.463 4.306 -1.430 4.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.176 3.824 6 O -0.206 6.206 7 C -0.074 4.074 8 C -0.197 4.197 9 C -0.168 4.168 10 O -0.329 6.329 11 Si 0.582 3.418 12 C -0.032 4.032 13 C -0.214 4.214 14 C 0.354 3.646 15 O -0.393 6.393 16 N -0.387 5.387 17 C 0.011 3.989 18 C -0.141 4.141 19 H 0.123 0.877 20 C -0.178 4.178 21 C 0.004 3.996 22 H 0.142 0.858 23 N -0.132 5.132 24 C -0.190 4.190 25 C -0.178 4.178 26 N -0.212 5.212 27 C -0.100 4.100 28 C -0.174 4.174 29 H 0.077 0.923 30 H 0.076 0.924 31 H 0.126 0.874 32 H 0.163 0.837 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.125 0.875 36 H 0.136 0.864 37 H 0.219 0.781 38 H -0.183 1.183 39 H -0.178 1.178 40 H 0.157 0.843 41 H 0.231 0.769 42 H 0.092 0.908 43 H 0.092 0.908 44 H 0.116 0.884 45 H 0.104 0.896 46 H 0.190 0.810 47 H 0.186 0.814 48 H 0.217 0.783 49 H 0.103 0.897 50 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.474 3.577 -0.835 3.958 hybrid contribution -0.370 1.030 -1.880 2.176 sum -1.844 4.607 -2.716 5.656 Atomic orbital electron populations 1.23248 0.78167 1.04899 1.01358 1.86402 1.21232 1.25032 1.85733 1.18732 0.90644 0.84421 0.87661 1.21311 1.01165 0.91505 1.19386 1.18716 0.90434 0.84695 0.88565 1.86160 1.19477 1.28481 1.86518 1.23222 0.77788 1.04690 1.01655 1.19362 0.90787 0.96243 1.13260 1.24798 1.10702 0.92905 0.88388 1.86659 1.80078 1.49912 1.16281 0.95270 0.74359 0.82214 0.89908 1.20871 0.99246 0.90081 0.92957 1.19021 0.90641 0.93517 1.18172 1.17794 0.81641 0.88620 0.76580 1.90862 1.71363 1.28686 1.48362 1.45857 1.06025 1.09622 1.77234 1.21292 0.87749 0.86809 1.03092 1.22649 0.94029 0.99498 0.97943 0.87696 1.23574 0.94772 1.02117 0.97386 1.23061 0.95280 0.91754 0.89515 0.85780 1.45580 1.06517 1.32096 1.28986 1.22780 0.85955 1.05705 1.04584 1.22365 0.96019 1.00121 0.99296 1.70342 1.00579 1.24709 1.25528 1.24866 0.99603 0.93526 0.92003 1.23438 0.95818 0.98206 0.99906 0.92319 0.92413 0.87431 0.83747 0.92255 0.92169 0.87474 0.86355 0.78074 1.18291 1.17763 0.84341 0.76889 0.90797 0.90808 0.88419 0.89630 0.80983 0.81370 0.78266 0.89656 0.88450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.83 8.56 -40.62 -0.35 -1.18 16 3 C 0.24 0.48 6.70 -38.73 -0.26 0.22 16 4 C -0.31 -0.09 8.01 -39.34 -0.31 -0.40 16 5 C 0.22 0.15 6.67 -39.06 -0.26 -0.11 16 6 O -0.30 -0.21 9.80 -18.83 -0.18 -0.40 16 7 C 0.02 -0.06 9.80 101.05 0.99 0.94 16 8 C -0.20 0.03 5.27 -104.52 -0.55 -0.52 16 9 C -0.06 0.03 2.37 36.00 0.09 0.12 16 10 O -0.52 -0.51 12.88 -35.23 -0.45 -0.96 16 11 Si 0.68 -1.66 30.23 -169.99 -5.14 -6.80 16 12 C -0.01 0.01 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.31 5.89 -104.83 -0.62 -0.93 16 14 C 0.57 1.42 7.76 -12.57 -0.10 1.32 16 15 O -0.52 -3.35 15.15 -16.66 -0.25 -3.60 16 16 N -0.73 0.87 5.50 -61.43 -0.34 0.53 16 17 C 0.13 -0.26 5.52 -4.04 -0.02 -0.29 16 18 C -0.12 0.55 3.75 -89.81 -0.34 0.21 16 19 H 0.10 -0.58 8.14 -51.92 -0.42 -1.00 16 20 C -0.14 0.60 7.20 -25.92 -0.19 0.42 16 21 C 0.11 -0.36 4.64 -67.12 -0.31 -0.68 16 22 H 0.12 -0.58 8.14 -51.93 -0.42 -1.01 16 23 N -0.45 0.12 2.95 -110.59 -0.33 -0.21 16 24 C -0.06 -0.03 11.58 -16.56 -0.19 -0.22 16 25 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 26 N -0.49 -2.29 11.25 -14.66 -0.16 -2.45 16 27 C 0.18 0.28 11.33 -90.37 -1.02 -0.75 16 28 C -0.13 0.51 7.31 -25.92 -0.19 0.32 16 29 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 30 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 31 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.14 -0.27 4.50 -52.49 -0.24 -0.50 16 33 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 34 H 0.06 -0.22 7.65 -51.93 -0.40 -0.62 16 35 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 36 H 0.12 -0.05 7.82 -51.93 -0.41 -0.45 16 37 H 0.37 -0.80 8.70 45.56 0.40 -0.41 16 38 H -0.26 0.57 6.69 56.52 0.38 0.95 16 39 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 40 H 0.14 -0.48 3.16 -52.48 -0.17 -0.64 16 41 H 0.40 -1.47 6.49 -40.82 -0.26 -1.73 16 42 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.07 -0.09 7.85 -51.93 -0.41 -0.49 16 44 H 0.10 -0.35 6.75 -51.93 -0.35 -0.70 16 45 H 0.09 -0.43 8.14 -51.92 -0.42 -0.85 16 46 H 0.17 -0.40 8.06 -52.49 -0.42 -0.82 16 47 H 0.17 0.15 8.06 -52.48 -0.42 -0.27 16 48 H 0.20 -0.25 7.50 -52.49 -0.39 -0.64 16 49 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 50 H 0.10 -0.28 7.83 -51.92 -0.41 -0.69 16 LS Contribution 408.02 15.07 6.15 6.15 Total: 0.00 -12.34 408.02 -10.73 -23.07 By element: Atomic # 1 Polarization: -7.34 SS G_CDS: -6.85 Total: -14.19 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: -2.83 Total: 0.03 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -0.83 Total: -2.13 kcal Atomic # 8 Polarization: -4.90 SS G_CDS: -1.24 Total: -6.14 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.14 Total: -6.80 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -12.34 -10.73 -23.07 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.063 kcal (2) G-P(sol) polarization free energy of solvation -12.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.069 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.007 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds