Wall clock time and date at job start Sun Mar 7 2021 07:49:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86297 * 109.47126 * 2 1 4 4 C 1.50694 * 109.47244 * 120.00168 * 2 1 3 5 5 C 1.38407 * 119.82882 * 64.99328 * 4 2 1 6 6 C 1.37886 * 120.17168 * 180.02562 * 5 4 2 7 7 C 1.39842 * 119.82750 * 359.97438 * 6 5 4 8 8 C 1.47202 * 120.16852 * 179.97438 * 7 6 5 9 9 C 1.34808 * 120.00002 * 180.02562 * 8 7 6 10 10 C 1.46426 * 120.00487 * 180.02562 * 9 8 7 11 11 O 1.21704 * 119.99765 * 359.97438 * 10 9 8 12 12 N 1.34778 * 120.00297 * 179.97438 * 10 9 8 13 13 C 1.46498 * 119.99710 * 179.97438 * 12 10 9 14 14 C 1.53001 * 109.46735 * 180.02562 * 13 12 10 15 15 H 1.08998 * 112.84794 * 316.19088 * 14 13 12 16 16 C 1.53778 * 113.69389 * 87.46692 * 14 13 12 17 17 C 1.53778 * 87.08449 * 139.99094 * 16 14 13 18 18 H 1.09000 * 113.61263 * 89.11673 * 17 16 14 19 19 N 1.46502 * 113.61376 * 220.01807 * 17 16 14 20 20 C 1.36881 * 126.39658 * 217.20725 * 19 17 16 21 21 C 1.34666 * 106.81671 * 179.84164 * 20 19 17 22 22 N 1.34131 * 108.01940 * 0.42616 * 21 20 19 23 23 C 1.30503 * 109.25562 * 359.72983 * 22 21 20 24 24 C 1.53784 * 87.08081 * 334.56700 * 17 16 14 25 25 C 1.39834 * 119.65946 * 0.25130 * 7 6 5 26 26 C 1.37894 * 119.82306 * 359.53599 * 25 7 6 27 27 H 0.96705 * 113.99614 * 300.00103 * 1 2 3 28 28 H 1.09005 * 109.46638 * 240.00277 * 2 1 3 29 29 H 1.48504 * 110.00035 * 178.68328 * 3 2 1 30 30 H 1.48505 * 110.00085 * 300.00153 * 3 2 1 31 31 H 1.08000 * 119.91112 * 0.02562 * 5 4 2 32 32 H 1.08000 * 120.08807 * 179.97438 * 6 5 4 33 33 H 1.08000 * 120.00590 * 359.97438 * 8 7 6 34 34 H 1.07996 * 119.99885 * 359.97438 * 9 8 7 35 35 H 0.96995 * 119.99578 * 0.02562 * 12 10 9 36 36 H 1.08997 * 109.47376 * 60.00025 * 13 12 10 37 37 H 1.09003 * 109.47215 * 300.00052 * 13 12 10 38 38 H 1.08999 * 113.61111 * 254.54157 * 16 14 13 39 39 H 1.09004 * 113.61682 * 25.43554 * 16 14 13 40 40 H 1.08001 * 126.58868 * 359.97438 * 20 19 17 41 41 H 1.08003 * 125.98993 * 180.11969 * 21 20 19 42 42 H 1.08002 * 125.64628 * 180.02562 * 23 22 21 43 43 H 1.09004 * 113.61451 * 270.88641 * 24 17 16 44 44 H 1.08994 * 113.61477 * 139.97943 * 24 17 16 45 45 H 1.07997 * 120.08618 * 179.72739 * 25 7 6 46 46 H 1.08000 * 119.91298 * 180.20986 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6823 -2.0619 1.3949 6 6 2.1382 -2.7189 2.5182 7 6 2.8543 -2.0162 3.4924 8 6 3.3441 -2.7099 4.6947 9 6 4.0336 -2.0291 5.6319 10 6 4.5213 -2.7192 6.8278 11 8 4.3037 -3.9074 6.9758 12 7 5.2111 -2.0385 7.7644 13 6 5.6985 -2.7290 8.9611 14 6 6.4430 -1.7356 9.8553 15 1 7.1122 -1.0818 9.2959 16 6 5.5302 -0.9859 10.8399 17 6 6.6493 -1.1517 11.8815 18 1 7.3748 -0.3382 11.8761 19 7 6.1584 -1.4690 13.2248 20 6 6.6769 -1.0148 14.4074 21 6 5.9257 -1.5449 15.3914 22 7 4.9802 -2.3097 14.8254 23 6 5.1135 -2.2690 13.5278 24 6 7.1017 -2.3859 11.0834 25 6 3.0978 -0.6499 3.3211 26 6 2.6391 -0.0080 2.1902 27 1 -0.3933 0.4418 0.7651 28 1 1.7923 -0.5138 -0.8901 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 1.1295 -2.6033 0.6415 32 1 1.9428 -3.7734 2.6454 33 1 3.1503 -3.7642 4.8266 34 1 4.2271 -0.9748 5.5003 35 1 5.3842 -1.0915 7.6466 36 1 6.3748 -3.5317 8.6673 37 1 4.8538 -3.1476 9.5084 38 1 5.3443 0.0510 10.5600 39 1 4.6179 -1.5281 11.0890 40 1 7.5242 -0.3560 14.5280 41 1 6.0637 -1.3864 16.4508 42 1 4.4909 -2.7886 12.8145 43 1 6.6191 -3.3109 11.3991 44 1 8.1844 -2.4792 11.0001 45 1 3.6463 -0.0995 4.0712 46 1 2.8292 1.0465 2.0548 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:49:14 Heat of formation + Delta-G solvation = 69.624532 kcal Electronic energy + Delta-G solvation = -26891.983720 eV Core-core repulsion = 22943.516432 eV Total energy + Delta-G solvation = -3948.467287 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -43.10476 -41.06183 -40.65594 -39.90891 -37.86035 -35.81929 -35.10521 -33.46913 -32.33587 -31.46466 -30.32962 -29.20369 -27.20704 -27.03123 -24.93993 -24.18451 -23.54860 -22.50935 -22.02037 -21.91624 -20.75642 -20.18317 -18.94101 -18.61879 -18.04409 -17.37549 -17.09109 -16.77108 -16.57035 -16.29131 -16.19948 -16.04358 -15.67228 -15.24121 -15.18842 -14.93878 -14.75255 -14.66416 -14.47141 -14.42722 -14.19081 -13.90195 -13.89779 -13.57111 -13.40307 -13.25736 -13.08221 -12.42883 -12.30699 -12.11457 -12.04332 -11.90437 -11.81970 -11.40598 -10.99317 -10.85121 -10.52331 -10.48708 -10.19865 -10.10766 -9.41265 -9.34737 -5.12779 -0.63368 0.26712 0.83743 1.10823 1.19488 1.54850 1.75577 1.89559 2.07114 2.23118 2.32298 2.71625 2.98057 3.07105 3.31819 3.33566 3.35985 3.47716 3.55335 3.69119 3.73449 3.77118 3.82480 3.95086 3.98162 4.04604 4.11932 4.21025 4.24316 4.32103 4.32560 4.39629 4.42751 4.51438 4.57239 4.64562 4.67020 4.71809 4.81633 4.84548 4.94800 4.97811 5.03064 5.25337 5.31414 5.36823 5.37770 5.50248 5.77221 5.85715 6.25624 6.39714 6.47444 7.16761 7.20551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.071 4.071 3 Si 0.687 3.313 4 C -0.107 4.107 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.074 4.074 8 C -0.014 4.014 9 C -0.216 4.216 10 C 0.547 3.453 11 O -0.542 6.542 12 N -0.727 5.727 13 C 0.131 3.869 14 C -0.120 4.120 15 H 0.106 0.894 16 C -0.140 4.140 17 C 0.108 3.892 18 H 0.125 0.875 19 N -0.449 5.449 20 C -0.058 4.058 21 C -0.030 4.030 22 N -0.493 5.493 23 C 0.181 3.819 24 C -0.136 4.136 25 C -0.095 4.095 26 C -0.118 4.118 27 H 0.380 0.620 28 H 0.115 0.885 29 H -0.257 1.257 30 H -0.254 1.254 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.131 0.869 35 H 0.402 0.598 36 H 0.074 0.926 37 H 0.072 0.928 38 H 0.084 0.916 39 H 0.096 0.904 40 H 0.173 0.827 41 H 0.169 0.831 42 H 0.200 0.800 43 H 0.097 0.903 44 H 0.085 0.915 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.740 6.052 -1.421 6.794 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.589 3.411 4 C -0.108 4.108 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.074 4.074 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.336 3.664 11 O -0.421 6.421 12 N -0.378 5.378 13 C 0.008 3.992 14 C -0.139 4.139 15 H 0.124 0.876 16 C -0.178 4.178 17 C 0.004 3.996 18 H 0.143 0.857 19 N -0.132 5.132 20 C -0.190 4.190 21 C -0.178 4.178 22 N -0.211 5.211 23 C -0.101 4.101 24 C -0.175 4.175 25 C -0.113 4.113 26 C -0.135 4.135 27 H 0.227 0.773 28 H 0.132 0.868 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.148 0.852 32 H 0.150 0.850 33 H 0.156 0.844 34 H 0.148 0.852 35 H 0.237 0.763 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.103 0.897 39 H 0.114 0.886 40 H 0.191 0.809 41 H 0.187 0.813 42 H 0.217 0.783 43 H 0.115 0.885 44 H 0.104 0.896 45 H 0.150 0.850 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.624 5.078 -1.965 6.044 hybrid contribution 0.952 0.390 -0.604 1.193 sum 3.576 5.468 -2.569 7.020 Atomic orbital electron populations 1.86525 1.16899 1.81699 1.49256 1.25107 0.85402 1.10219 0.97475 0.94786 0.81029 0.77936 0.87396 1.20532 0.98602 0.95023 0.96624 1.21006 0.98784 0.93733 0.97725 1.21474 0.96163 1.00215 0.93109 1.19066 0.99811 0.93638 0.94867 1.22420 0.90718 1.00038 0.90177 1.22868 1.04387 1.00851 0.95533 1.18343 0.77936 0.86778 0.83303 1.90854 1.57388 1.15328 1.78519 1.45833 1.57155 1.13367 1.21478 1.21317 0.98318 0.94549 0.85066 1.22637 0.98258 0.98170 0.94875 0.87573 1.23557 0.97503 1.02512 0.94216 1.23057 0.98394 0.99642 0.78476 0.85737 1.45578 1.24832 1.36362 1.06456 1.22785 1.04128 1.07117 0.84984 1.22372 0.95315 1.00381 0.99684 1.70345 1.24191 1.21237 1.05349 1.24862 0.92834 0.98414 0.93957 1.23450 1.02408 0.97730 0.93867 1.21351 0.98909 0.93636 0.97426 1.20933 0.98990 0.99387 0.94229 0.77301 0.86786 1.18217 1.17859 0.85175 0.85021 0.84444 0.85170 0.76349 0.90787 0.90935 0.89727 0.88560 0.80942 0.81327 0.78301 0.88497 0.89593 0.85042 0.85234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.21 12.83 -35.23 -0.45 -0.24 16 2 C -0.07 0.07 2.80 36.00 0.10 0.17 16 3 Si 0.69 -1.28 29.78 -169.99 -5.06 -6.34 16 4 C -0.11 0.09 5.36 -104.50 -0.56 -0.47 16 5 C -0.09 0.03 9.66 -39.65 -0.38 -0.35 16 6 C -0.09 0.05 9.80 -39.11 -0.38 -0.34 16 7 C -0.07 0.05 5.87 -105.06 -0.62 -0.57 16 8 C -0.01 0.01 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.27 9.41 -37.50 -0.35 -0.08 16 10 C 0.55 0.44 7.74 -12.96 -0.10 0.34 16 11 O -0.54 -2.80 16.23 5.19 0.08 -2.71 16 12 N -0.73 1.78 5.55 -61.70 -0.34 1.44 16 13 C 0.13 -0.34 5.51 -4.04 -0.02 -0.36 16 14 C -0.12 0.60 3.75 -89.81 -0.34 0.27 16 15 H 0.11 -0.66 8.14 -51.93 -0.42 -1.08 16 16 C -0.14 0.64 7.19 -25.92 -0.19 0.45 16 17 C 0.11 -0.39 4.64 -67.12 -0.31 -0.70 16 18 H 0.12 -0.62 8.14 -51.93 -0.42 -1.04 16 19 N -0.45 0.18 2.94 -110.59 -0.33 -0.15 16 20 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 21 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 22 N -0.49 -2.24 11.25 -14.66 -0.16 -2.40 16 23 C 0.18 0.26 11.37 -90.38 -1.03 -0.77 16 24 C -0.14 0.55 7.32 -25.91 -0.19 0.37 16 25 C -0.10 0.17 9.41 -39.11 -0.37 -0.20 16 26 C -0.12 0.21 8.65 -39.65 -0.34 -0.13 16 27 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 28 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H -0.26 -0.12 7.11 56.52 0.40 0.29 16 30 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 31 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 32 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 33 H 0.14 0.05 7.52 -52.49 -0.39 -0.34 16 34 H 0.13 -0.55 6.07 -52.49 -0.32 -0.86 16 35 H 0.40 -2.15 8.45 -40.82 -0.35 -2.49 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 -0.11 7.85 -51.93 -0.41 -0.52 16 38 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 39 H 0.10 -0.36 6.68 -51.93 -0.35 -0.70 16 40 H 0.17 -0.43 8.06 -52.49 -0.42 -0.85 16 41 H 0.17 0.13 8.06 -52.48 -0.42 -0.30 16 42 H 0.20 -0.26 7.44 -52.49 -0.39 -0.65 16 43 H 0.10 -0.30 7.86 -51.93 -0.41 -0.71 16 44 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 45 H 0.13 -0.54 6.17 -52.49 -0.32 -0.86 16 46 H 0.13 -0.49 4.88 -52.49 -0.26 -0.75 16 LS Contribution 386.72 15.07 5.83 5.83 Total: 0.00 -11.26 386.72 -12.48 -23.74 By element: Atomic # 1 Polarization: -9.71 SS G_CDS: -6.21 Total: -15.92 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -5.84 Total: -3.24 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.83 Total: -1.12 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -0.37 Total: -2.95 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.06 Total: -6.34 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -11.26 -12.48 -23.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.366 kcal (2) G-P(sol) polarization free energy of solvation -11.258 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds