Wall clock time and date at job start Sun Mar 7 2021 07:49:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35654 * 116.99972 * 2 1 4 4 C 1.40145 * 120.15189 * 180.02562 * 3 2 1 5 5 C 1.47536 * 120.18915 * 359.95157 * 4 3 2 6 6 O 1.21595 * 119.99934 * 0.02562 * 5 4 3 7 7 N 1.34773 * 119.99813 * 180.02562 * 5 4 3 8 8 C 1.46506 * 119.99969 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47237 * 179.72043 * 8 7 5 10 10 H 1.09002 * 112.84900 * 43.80541 * 9 8 7 11 11 C 1.53782 * 113.61474 * 174.99495 * 9 8 7 12 12 C 1.53780 * 87.07932 * 139.97980 * 11 9 8 13 13 H 1.09011 * 113.60819 * 89.11953 * 12 11 9 14 14 N 1.46492 * 113.61868 * 220.01725 * 12 11 9 15 15 C 1.36878 * 126.40340 * 239.71731 * 14 12 11 16 16 C 1.34663 * 106.82211 * 179.84243 * 15 14 12 17 17 N 1.34129 * 108.02047 * 0.41993 * 16 15 14 18 18 C 1.30499 * 109.25411 * 359.73603 * 17 16 15 19 19 C 1.53778 * 113.61504 * 272.49537 * 9 8 7 20 20 C 1.39707 * 119.61718 * 180.23251 * 4 3 2 21 21 C 1.37784 * 119.90919 * 359.53371 * 20 4 3 22 22 C 1.50698 * 119.85299 * 180.18940 * 21 20 4 23 23 O 1.42901 * 109.47149 * 300.25687 * 22 21 20 24 24 Si 1.86294 * 109.47587 * 180.25079 * 22 21 20 25 25 C 1.38553 * 120.29734 * 0.44184 * 21 20 4 26 26 C 1.38055 * 120.39216 * 359.79059 * 25 21 20 27 27 H 1.08994 * 109.47152 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46779 * 300.00244 * 1 2 3 29 29 H 1.09005 * 109.47297 * 59.99602 * 1 2 3 30 30 H 0.97005 * 120.00161 * 359.72201 * 7 5 4 31 31 H 1.09001 * 109.46512 * 299.72412 * 8 7 5 32 32 H 1.08998 * 109.47174 * 59.71534 * 8 7 5 33 33 H 1.08995 * 113.61743 * 254.53089 * 11 9 8 34 34 H 1.09004 * 113.60877 * 25.43489 * 11 9 8 35 35 H 1.08004 * 126.58539 * 359.97438 * 15 14 12 36 36 H 1.08005 * 125.99419 * 180.12039 * 16 15 14 37 37 H 1.07999 * 125.65186 * 179.97438 * 18 17 16 38 38 H 1.08991 * 113.61424 * 334.56676 * 19 9 8 39 39 H 1.09002 * 113.61088 * 105.47232 * 19 9 8 40 40 H 1.08001 * 120.04173 * 179.72178 * 20 4 3 41 41 H 1.09003 * 109.46755 * 60.25135 * 22 21 20 42 42 H 0.96697 * 113.99429 * 300.00170 * 23 22 21 43 43 H 1.48507 * 109.99477 * 58.68140 * 24 22 21 44 44 H 1.48494 * 110.00455 * 179.97438 * 24 22 21 45 45 H 1.08007 * 119.80021 * 179.76435 * 25 21 20 46 46 H 1.07994 * 119.95617 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4442 1.2858 -0.0005 5 6 4.2550 0.0532 0.0000 6 8 3.7095 -1.0335 0.0004 7 7 5.6005 0.1318 0.0000 8 6 6.4057 -1.0921 -0.0001 9 6 7.8911 -0.7253 -0.0071 10 1 8.1311 0.0818 0.6851 11 6 8.8262 -1.9401 0.1152 12 6 9.7287 -1.2505 -0.9215 13 1 10.4720 -0.5863 -0.4803 14 7 10.3004 -2.1714 -1.9070 15 6 11.6317 -2.3942 -2.1339 16 6 11.7113 -3.3124 -3.1159 17 7 10.4627 -3.6344 -3.4850 18 6 9.6123 -2.9549 -2.7652 19 6 8.4687 -0.5218 -1.4177 20 6 4.0668 2.5364 0.0044 21 6 3.3038 3.6837 0.0000 22 6 3.9767 5.0321 0.0010 23 8 4.7923 5.1566 1.1678 24 14 2.6826 6.3721 0.0021 25 6 1.9206 3.6033 0.0000 26 6 1.2924 2.3739 0.0000 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 6.0357 0.9987 -0.0044 31 1 6.1797 -1.6756 0.8924 32 1 6.1725 -1.6804 -0.8875 33 1 9.2869 -2.0393 1.0980 34 1 8.3829 -2.8698 -0.2415 35 1 12.4593 -1.9255 -1.6222 36 1 12.6211 -3.7150 -3.5362 37 1 8.5366 -3.0096 -2.8432 38 1 7.9278 -1.0638 -2.1933 39 1 8.6409 0.5240 -1.6723 40 1 5.1447 2.6038 0.0085 41 1 4.5987 5.1284 -0.8889 42 1 4.3038 5.0807 1.9989 43 1 1.8080 6.2326 1.1942 44 1 3.3334 7.7069 0.0037 45 1 1.3303 4.5078 0.0004 46 1 0.2139 2.3195 0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:49:21 Heat of formation + Delta-G solvation = 25.738337 kcal Electronic energy + Delta-G solvation = -29333.554411 eV Core-core repulsion = 25192.728024 eV Total energy + Delta-G solvation = -4140.826387 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -43.07005 -41.78628 -40.56569 -39.58245 -39.29001 -37.31592 -35.67143 -33.55767 -32.70873 -31.92724 -30.29240 -29.12486 -28.46606 -27.12901 -26.28301 -25.40579 -24.30346 -22.63595 -22.43815 -21.87305 -21.40469 -20.37406 -19.60113 -18.68577 -18.39644 -18.04392 -17.27874 -17.07324 -16.87821 -16.58451 -16.29560 -16.10692 -16.02519 -15.98426 -15.83676 -15.16000 -14.89580 -14.77673 -14.62373 -14.48851 -14.42769 -14.33120 -13.85203 -13.63488 -13.60442 -13.45741 -13.21525 -13.15526 -12.49124 -12.37004 -12.31809 -12.14956 -11.99046 -11.84521 -11.77437 -10.96103 -10.82095 -10.60890 -10.45051 -10.29386 -10.05502 -9.38017 -9.33564 -5.07475 -0.30461 0.13476 1.14271 1.16436 1.47947 1.79102 1.82400 1.86361 2.08200 2.17523 2.35382 2.67757 3.02903 3.11904 3.22321 3.36595 3.39159 3.45357 3.54637 3.59088 3.77664 3.85703 3.90660 3.99118 4.03348 4.05145 4.15361 4.16509 4.28474 4.30266 4.37454 4.44397 4.45094 4.52827 4.55698 4.59949 4.60864 4.71060 4.72846 4.83282 4.85349 4.99318 5.02497 5.17174 5.36327 5.41446 5.44662 5.88875 6.23327 6.26982 6.29072 6.47891 7.23719 7.28392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.561 3.439 6 O -0.515 6.515 7 N -0.731 5.731 8 C 0.134 3.866 9 C -0.121 4.121 10 H 0.106 0.894 11 C -0.135 4.135 12 C 0.108 3.892 13 H 0.125 0.875 14 N -0.449 5.449 15 C -0.057 4.057 16 C -0.030 4.030 17 N -0.494 5.494 18 C 0.182 3.818 19 C -0.140 4.140 20 C -0.020 4.020 21 C -0.167 4.167 22 C -0.068 4.068 23 O -0.531 6.531 24 Si 0.681 3.319 25 C -0.046 4.046 26 C -0.214 4.214 27 H 0.105 0.895 28 H 0.058 0.942 29 H 0.059 0.941 30 H 0.399 0.601 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.085 0.915 34 H 0.097 0.903 35 H 0.173 0.827 36 H 0.169 0.831 37 H 0.200 0.800 38 H 0.096 0.904 39 H 0.084 0.916 40 H 0.135 0.865 41 H 0.120 0.880 42 H 0.377 0.623 43 H -0.259 1.259 44 H -0.256 1.256 45 H 0.134 0.866 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.197 5.742 1.805 6.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.348 3.652 6 O -0.390 6.390 7 N -0.385 5.385 8 C 0.010 3.990 9 C -0.140 4.140 10 H 0.124 0.876 11 C -0.174 4.174 12 C 0.004 3.996 13 H 0.143 0.857 14 N -0.132 5.132 15 C -0.190 4.190 16 C -0.178 4.178 17 N -0.212 5.212 18 C -0.100 4.100 19 C -0.178 4.178 20 C -0.039 4.039 21 C -0.168 4.168 22 C -0.178 4.178 23 O -0.337 6.337 24 Si 0.582 3.418 25 C -0.064 4.064 26 C -0.232 4.232 27 H 0.124 0.876 28 H 0.076 0.924 29 H 0.078 0.922 30 H 0.234 0.766 31 H 0.092 0.908 32 H 0.091 0.909 33 H 0.104 0.896 34 H 0.115 0.885 35 H 0.190 0.810 36 H 0.187 0.813 37 H 0.217 0.783 38 H 0.115 0.885 39 H 0.103 0.897 40 H 0.153 0.847 41 H 0.137 0.863 42 H 0.224 0.776 43 H -0.184 1.184 44 H -0.181 1.181 45 H 0.152 0.848 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.635 4.994 1.267 5.788 hybrid contribution 0.593 0.880 1.771 2.064 sum -2.042 5.874 3.038 6.922 Atomic orbital electron populations 1.23244 0.78123 1.04810 1.01475 1.86383 1.21254 1.25174 1.86126 1.19103 0.90955 0.85089 0.90422 1.19322 0.90896 0.93859 1.13816 1.17943 0.81779 0.88701 0.76760 1.90862 1.71504 1.28601 1.48058 1.45864 1.05959 1.09780 1.76875 1.21297 0.87815 0.86836 1.03026 1.22642 0.93953 0.99534 0.97860 0.87586 1.23440 0.95861 0.98216 0.99854 1.23060 0.95343 0.91696 0.89472 0.85745 1.45581 1.06534 1.32358 1.28722 1.22780 0.86007 1.05556 1.04661 1.22366 0.95970 1.00333 0.99135 1.70341 1.00665 1.24543 1.25603 1.24863 0.99569 0.93918 0.91679 1.23562 0.94816 1.02065 0.97383 1.20948 0.99836 0.89838 0.93251 1.20066 0.93564 0.95905 1.07256 1.24931 1.02537 0.99181 0.91184 1.86592 1.36868 1.94474 1.15772 0.95056 0.79617 0.77604 0.89485 1.21000 0.93741 0.97369 0.94318 1.21238 1.00788 0.91537 1.09664 0.87628 0.92350 0.92191 0.76589 0.90798 0.90917 0.89601 0.88488 0.80963 0.81345 0.78295 0.88532 0.89732 0.84739 0.86259 0.77550 1.18429 1.18063 0.84827 0.84100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.85 8.57 -40.54 -0.35 -1.19 16 3 C 0.19 0.33 6.70 -38.69 -0.26 0.08 16 4 C -0.18 -0.25 5.89 -104.84 -0.62 -0.87 16 5 C 0.56 1.54 7.76 -12.47 -0.10 1.45 16 6 O -0.51 -3.50 15.16 -16.60 -0.25 -3.75 16 7 N -0.73 0.67 5.51 -61.35 -0.34 0.33 16 8 C 0.13 -0.21 5.51 -4.04 -0.02 -0.24 16 9 C -0.12 0.50 3.75 -89.81 -0.34 0.16 16 10 H 0.11 -0.55 8.14 -51.93 -0.42 -0.97 16 11 C -0.13 0.47 7.32 -25.92 -0.19 0.28 16 12 C 0.11 -0.32 4.64 -67.12 -0.31 -0.64 16 13 H 0.12 -0.54 8.14 -51.92 -0.42 -0.96 16 14 N -0.45 -0.04 2.94 -110.60 -0.33 -0.37 16 15 C -0.06 -0.05 11.58 -16.56 -0.19 -0.24 16 16 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 17 N -0.49 -2.43 11.25 -14.66 -0.16 -2.59 16 18 C 0.18 0.34 11.37 -90.37 -1.03 -0.69 16 19 C -0.14 0.53 7.18 -25.92 -0.19 0.34 16 20 C -0.02 0.02 9.08 -39.20 -0.36 -0.34 16 21 C -0.17 0.26 5.39 -104.67 -0.56 -0.30 16 22 C -0.07 0.15 2.81 36.00 0.10 0.25 16 23 O -0.53 0.46 12.76 -35.23 -0.45 0.01 16 24 Si 0.68 -1.65 29.77 -169.99 -5.06 -6.71 16 25 C -0.05 0.08 8.66 -39.53 -0.34 -0.26 16 26 C -0.21 0.18 9.03 -39.48 -0.36 -0.17 16 27 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.40 -1.36 6.50 -40.82 -0.27 -1.62 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 -0.05 7.84 -51.93 -0.41 -0.46 16 33 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.10 -0.25 7.86 -51.93 -0.41 -0.65 16 35 H 0.17 -0.35 8.06 -52.48 -0.42 -0.77 16 36 H 0.17 0.19 8.06 -52.48 -0.42 -0.24 16 37 H 0.20 -0.17 7.43 -52.49 -0.39 -0.56 16 38 H 0.10 -0.29 6.67 -51.93 -0.35 -0.64 16 39 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 40 H 0.13 -0.40 6.40 -52.49 -0.34 -0.74 16 41 H 0.12 -0.36 7.96 -51.93 -0.41 -0.77 16 42 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 43 H -0.26 0.12 7.11 56.52 0.40 0.52 16 44 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 45 H 0.13 -0.51 4.85 -52.48 -0.25 -0.77 16 46 H 0.14 -0.42 6.30 -52.49 -0.33 -0.75 16 LS Contribution 379.36 15.07 5.72 5.72 Total: 0.00 -11.62 379.36 -11.33 -22.95 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -6.13 Total: -13.88 kcal Atomic # 6 Polarization: 3.46 SS G_CDS: -3.98 Total: -0.52 kcal Atomic # 7 Polarization: -1.80 SS G_CDS: -0.83 Total: -2.63 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -1.05 Total: -4.94 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.06 Total: -6.71 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -11.62 -11.33 -22.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.688 kcal (2) G-P(sol) polarization free energy of solvation -11.620 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.329 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.949 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds