Wall clock time and date at job start Sun Mar 7 2021 07:49:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86297 * 109.47108 * 2 1 4 4 C 1.50701 * 109.47233 * 120.00228 * 2 1 3 5 5 C 1.37818 * 119.94045 * 14.97802 * 4 2 1 6 6 C 1.39667 * 119.87996 * 180.02562 * 5 4 2 7 7 C 1.47725 * 120.11575 * 180.02562 * 6 5 4 8 8 O 1.21568 * 120.00242 * 359.97438 * 7 6 5 9 9 N 1.34773 * 119.99615 * 180.02562 * 7 6 5 10 10 C 1.46502 * 120.00047 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47191 * 179.97438 * 10 9 7 12 12 H 1.09002 * 112.85116 * 45.33992 * 11 10 9 13 13 C 1.53791 * 113.61043 * 176.52870 * 11 10 9 14 14 C 1.53779 * 87.07623 * 139.98441 * 13 11 10 15 15 H 1.08998 * 113.61960 * 89.11526 * 14 13 11 16 16 N 1.46504 * 113.61498 * 219.93412 * 14 13 11 17 17 C 1.36878 * 126.40024 * 239.71832 * 16 14 13 18 18 C 1.34670 * 106.82029 * 179.83664 * 17 16 14 19 19 N 1.34130 * 108.01546 * 0.42270 * 18 17 16 20 20 C 1.30498 * 109.25756 * 359.72883 * 19 18 17 21 21 C 1.53777 * 113.61696 * 274.13353 * 11 10 9 22 22 C 1.39627 * 119.76396 * 359.75193 * 6 5 4 23 23 C 1.37860 * 119.88048 * 0.52491 * 22 6 5 24 24 C 1.38636 * 120.11685 * 359.44899 * 23 22 6 25 25 F 1.35093 * 119.88338 * 180.27883 * 24 23 22 26 26 H 0.96695 * 114.00097 * 299.99683 * 1 2 3 27 27 H 1.09004 * 109.47058 * 240.00368 * 2 1 3 28 28 H 1.48505 * 110.00330 * 178.67986 * 3 2 1 29 29 H 1.48503 * 110.00205 * 300.00111 * 3 2 1 30 30 H 1.08005 * 120.05906 * 0.02562 * 5 4 2 31 31 H 0.96997 * 120.00341 * 359.97438 * 9 7 6 32 32 H 1.09000 * 109.46971 * 299.99807 * 10 9 7 33 33 H 1.09002 * 109.46700 * 59.99711 * 10 9 7 34 34 H 1.08992 * 113.60986 * 254.52755 * 13 11 10 35 35 H 1.08995 * 113.61604 * 25.43928 * 13 11 10 36 36 H 1.08001 * 126.58762 * 359.97438 * 17 16 14 37 37 H 1.07997 * 125.98965 * 180.11132 * 18 17 16 38 38 H 1.08003 * 125.64716 * 179.97438 * 20 19 18 39 39 H 1.08998 * 113.61520 * 334.57558 * 21 11 10 40 40 H 1.09007 * 113.61373 * 105.47211 * 21 11 10 41 41 H 1.08004 * 120.06354 * 180.25064 * 22 6 5 42 42 H 1.08002 * 119.94551 * 179.73258 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.0730 -1.4943 1.9708 6 6 1.5398 -2.1518 3.1112 7 6 0.6243 -2.9938 3.9082 8 8 -0.5377 -3.1150 3.5722 9 7 1.0772 -3.6267 5.0086 10 6 0.1693 -4.4612 5.7994 11 6 0.9292 -5.0601 6.9847 12 1 1.5532 -4.3298 7.5000 13 6 0.0427 -5.8887 7.9295 14 6 1.2126 -6.8819 8.0284 15 1 1.9152 -6.6508 8.8290 16 7 0.7925 -8.2854 8.0278 17 6 1.0262 -9.2037 9.0156 18 6 0.4681 -10.3609 8.6120 19 7 -0.0832 -10.1572 7.4063 20 6 0.1072 -8.9163 7.0500 21 6 1.6627 -6.3691 6.6483 22 6 2.8761 -2.0149 3.4920 23 6 3.7249 -1.2238 2.7475 24 6 3.2564 -0.5738 1.6160 25 9 4.0937 0.1958 0.8868 26 1 -0.3933 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8901 28 1 3.5346 1.7703 0.0321 29 1 1.5615 2.4679 -1.2085 30 1 0.0412 -1.6000 1.6696 31 1 2.0043 -3.5296 5.2769 32 1 -0.6565 -3.8522 6.1671 33 1 -0.2217 -5.2649 5.1754 34 1 -0.1832 -5.3853 8.8695 35 1 -0.8422 -6.3030 7.4466 36 1 1.5547 -9.0324 9.9418 37 1 0.4690 -11.2912 9.1605 38 1 -0.2275 -8.4682 6.1261 39 1 1.2214 -6.9150 5.8144 40 1 2.7426 -6.2531 6.5555 41 1 3.2432 -2.5244 4.3707 42 1 4.7577 -1.1138 3.0435 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:49:25 Heat of formation + Delta-G solvation = 22.516942 kcal Electronic energy + Delta-G solvation = -27093.844373 eV Core-core repulsion = 22957.644131 eV Total energy + Delta-G solvation = -4136.200242 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -50.44053 -43.12232 -41.50947 -40.40814 -39.53116 -37.75539 -35.92672 -33.62883 -32.83563 -32.11104 -30.34357 -29.12121 -27.22980 -27.14460 -25.36321 -24.11990 -23.36685 -22.53251 -21.95654 -21.53506 -20.45179 -19.49249 -18.87609 -18.64677 -17.88551 -17.75657 -17.22394 -17.17171 -16.82695 -16.33424 -16.13195 -15.96994 -15.83432 -15.27652 -15.25322 -15.21288 -14.88854 -14.75243 -14.56478 -14.44536 -14.11190 -13.93362 -13.68022 -13.62878 -13.48974 -13.25496 -12.84595 -12.46329 -12.40768 -12.08662 -11.94505 -11.39419 -11.12318 -10.95924 -10.86617 -10.50795 -10.33978 -10.15068 -9.79057 -9.42910 -5.06526 -0.59382 -0.10660 1.08928 1.17496 1.56757 1.62129 1.71930 1.89325 1.98313 2.30763 2.50878 2.89168 2.93730 3.02432 3.13596 3.25184 3.28113 3.31169 3.47062 3.55166 3.69588 3.78042 3.80681 3.91074 3.95477 4.00205 4.19967 4.29111 4.29395 4.35148 4.42027 4.48838 4.55227 4.60528 4.62984 4.65803 4.73587 4.79538 4.90301 4.93382 4.96516 5.17410 5.34747 5.48265 5.84074 6.23607 6.24747 6.39681 7.01647 7.18993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.682 3.318 4 C -0.154 4.154 5 C -0.019 4.019 6 C -0.142 4.142 7 C 0.561 3.439 8 O -0.527 6.527 9 N -0.726 5.726 10 C 0.131 3.869 11 C -0.121 4.121 12 H 0.107 0.893 13 C -0.135 4.135 14 C 0.108 3.892 15 H 0.125 0.875 16 N -0.450 5.450 17 C -0.057 4.057 18 C -0.030 4.030 19 N -0.493 5.493 20 C 0.181 3.819 21 C -0.141 4.141 22 C -0.060 4.060 23 C -0.152 4.152 24 C 0.119 3.881 25 F -0.121 7.121 26 H 0.382 0.618 27 H 0.123 0.877 28 H -0.228 1.228 29 H -0.258 1.258 30 H 0.156 0.844 31 H 0.400 0.600 32 H 0.077 0.923 33 H 0.074 0.926 34 H 0.086 0.914 35 H 0.097 0.903 36 H 0.173 0.827 37 H 0.170 0.830 38 H 0.200 0.800 39 H 0.096 0.904 40 H 0.084 0.916 41 H 0.137 0.863 42 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.353 4.111 5.962 8.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.176 4.176 3 Si 0.582 3.418 4 C -0.156 4.156 5 C -0.038 4.038 6 C -0.146 4.146 7 C 0.348 3.652 8 O -0.404 6.404 9 N -0.379 5.379 10 C 0.008 3.992 11 C -0.140 4.140 12 H 0.125 0.875 13 C -0.173 4.173 14 C 0.004 3.996 15 H 0.143 0.857 16 N -0.133 5.133 17 C -0.190 4.190 18 C -0.177 4.177 19 N -0.211 5.211 20 C -0.101 4.101 21 C -0.179 4.179 22 C -0.079 4.079 23 C -0.171 4.171 24 C 0.099 3.901 25 F -0.099 7.099 26 H 0.229 0.771 27 H 0.141 0.859 28 H -0.152 1.152 29 H -0.183 1.183 30 H 0.174 0.826 31 H 0.236 0.764 32 H 0.095 0.905 33 H 0.093 0.907 34 H 0.105 0.895 35 H 0.116 0.884 36 H 0.191 0.809 37 H 0.187 0.813 38 H 0.217 0.783 39 H 0.115 0.885 40 H 0.103 0.897 41 H 0.155 0.845 42 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.731 3.850 4.271 6.855 hybrid contribution 1.265 0.057 0.446 1.343 sum 4.996 3.907 4.717 7.904 Atomic orbital electron populations 1.86524 1.16567 1.81439 1.49511 1.25017 0.85655 1.10308 0.96611 0.95263 0.81732 0.76453 0.88400 1.20383 0.92748 1.02212 1.00210 1.20981 1.00998 0.90885 0.90954 1.19955 0.94163 1.02216 0.98237 1.18116 0.87355 0.79399 0.80334 1.90839 1.17655 1.62553 1.69361 1.45853 1.14440 1.50077 1.27534 1.21361 0.92370 0.94452 0.91035 1.22646 0.98494 0.96286 0.96600 0.87527 1.23435 0.97383 0.95800 1.00729 1.23079 0.98475 0.77590 1.00411 0.85745 1.45572 1.41877 1.09706 1.16106 1.22785 1.09032 0.90559 0.96611 1.22376 1.02431 0.98538 0.94403 1.70343 1.22288 1.14922 1.13547 1.24862 0.99810 0.89329 0.96064 1.23596 1.02109 0.95901 0.96292 1.21153 0.91906 0.96127 0.98665 1.21097 1.01764 0.99183 0.95009 1.17779 0.87609 0.93123 0.91576 1.91583 1.71013 1.71535 1.75768 0.77059 0.85946 1.15223 1.18294 0.82617 0.76406 0.90497 0.90745 0.89516 0.88450 0.80932 0.81320 0.78300 0.88534 0.89727 0.84546 0.83588 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.03 11.64 -35.23 -0.41 -0.38 16 2 C -0.07 0.02 2.96 36.01 0.11 0.13 16 3 Si 0.68 -0.54 30.81 -169.99 -5.24 -5.78 16 4 C -0.15 0.07 5.13 -104.61 -0.54 -0.46 16 5 C -0.02 0.00 8.78 -39.20 -0.34 -0.34 16 6 C -0.14 0.14 5.87 -104.97 -0.62 -0.48 16 7 C 0.56 0.12 7.77 -12.39 -0.10 0.03 16 8 O -0.53 -2.25 16.34 5.31 0.09 -2.17 16 9 N -0.73 2.30 5.51 -61.29 -0.34 1.97 16 10 C 0.13 -0.45 5.50 -4.04 -0.02 -0.47 16 11 C -0.12 0.69 3.75 -89.80 -0.34 0.35 16 12 H 0.11 -0.74 8.14 -51.93 -0.42 -1.17 16 13 C -0.13 0.63 7.33 -25.91 -0.19 0.44 16 14 C 0.11 -0.44 4.64 -67.03 -0.31 -0.75 16 15 H 0.12 -0.67 8.14 -51.93 -0.42 -1.09 16 16 N -0.45 0.31 2.95 -110.50 -0.33 -0.01 16 17 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 19 N -0.49 -2.15 11.25 -14.67 -0.17 -2.32 16 20 C 0.18 0.21 11.38 -90.38 -1.03 -0.81 16 21 C -0.14 0.71 7.20 -25.83 -0.19 0.52 16 22 C -0.06 0.19 9.54 -39.20 -0.37 -0.18 16 23 C -0.15 0.36 10.01 -39.57 -0.40 -0.03 16 24 C 0.12 -0.06 6.67 -39.27 -0.26 -0.32 16 25 F -0.12 -0.11 12.82 2.25 0.03 -0.09 16 26 H 0.38 -1.50 8.43 45.56 0.38 -1.12 16 27 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 28 H -0.23 -0.31 5.27 56.52 0.30 -0.02 16 29 H -0.26 -0.65 7.11 56.52 0.40 -0.24 16 30 H 0.16 0.07 6.66 -52.48 -0.35 -0.28 16 31 H 0.40 -2.39 6.50 -40.82 -0.27 -2.65 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.17 7.87 -51.93 -0.41 -0.58 16 34 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 35 H 0.10 -0.35 7.86 -51.93 -0.41 -0.76 16 36 H 0.17 -0.47 8.06 -52.49 -0.42 -0.89 16 37 H 0.17 0.10 8.06 -52.49 -0.42 -0.32 16 38 H 0.20 -0.32 7.45 -52.48 -0.39 -0.71 16 39 H 0.10 -0.40 6.72 -51.93 -0.35 -0.75 16 40 H 0.08 -0.47 8.14 -51.92 -0.42 -0.90 16 41 H 0.14 -0.89 6.40 -52.48 -0.34 -1.22 16 42 H 0.15 -0.62 8.06 -52.49 -0.42 -1.04 16 LS Contribution 354.40 15.07 5.34 5.34 Total: 0.00 -10.65 354.40 -11.24 -21.89 By element: Atomic # 1 Polarization: -10.36 SS G_CDS: -5.22 Total: -15.58 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -5.00 Total: -2.86 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.83 Total: -0.36 kcal Atomic # 8 Polarization: -2.23 SS G_CDS: -0.32 Total: -2.55 kcal Atomic # 9 Polarization: -0.11 SS G_CDS: 0.03 Total: -0.09 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.24 Total: -5.78 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -10.65 -11.24 -21.89 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.405 kcal (2) G-P(sol) polarization free energy of solvation -10.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.888 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds