Wall clock time and date at job start Sun Mar 7 2021 07:49:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47206 * 2 1 4 4 C 1.50704 * 109.47221 * 119.99823 * 2 1 3 5 5 C 1.34833 * 125.65107 * 65.29854 * 4 2 1 6 6 C 1.40795 * 107.04981 * 180.15919 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.56997 * 6 5 4 8 8 C 1.47560 * 125.94613 * 180.28489 * 7 6 5 9 9 C 1.39921 * 119.95672 * 359.72916 * 8 7 6 10 10 C 1.36433 * 120.28012 * 179.75983 * 9 8 7 11 11 C 1.39873 * 120.18490 * 0.51431 * 10 9 8 12 12 C 1.47294 * 120.04781 * 179.76178 * 11 10 9 13 13 O 1.21620 * 120.00126 * 179.97438 * 12 11 10 14 14 N 1.34771 * 120.00015 * 359.97438 * 12 11 10 15 15 C 1.46503 * 120.00534 * 180.02562 * 14 12 11 16 16 C 1.52992 * 109.47251 * 179.97438 * 15 14 12 17 17 H 1.09005 * 112.85349 * 43.80643 * 16 15 14 18 18 C 1.53782 * 113.61195 * 174.99770 * 16 15 14 19 19 C 1.53783 * 87.08230 * 139.98354 * 18 16 15 20 20 H 1.08999 * 113.61170 * 89.19997 * 19 18 16 21 21 N 1.46496 * 113.61289 * 220.02042 * 19 18 16 22 22 C 1.36883 * 126.39623 * 239.70693 * 21 19 18 23 23 C 1.34670 * 106.81487 * 179.84560 * 22 21 19 24 24 N 1.34126 * 108.02394 * 0.42585 * 23 22 21 25 25 C 1.30501 * 109.25511 * 359.73021 * 24 23 22 26 26 C 1.53774 * 113.61767 * 272.49440 * 16 15 14 27 27 C 1.40409 * 119.90516 * 359.73601 * 11 10 9 28 28 O 1.35686 * 120.13473 * 179.97438 * 27 11 10 29 29 C 1.38269 * 119.72816 * 0.02562 * 27 11 10 30 30 O 1.34226 * 125.65161 * 244.97880 * 4 2 1 31 31 H 0.96697 * 113.99847 * 59.99973 * 1 2 3 32 32 H 1.08999 * 109.47490 * 239.99782 * 2 1 3 33 33 H 1.48496 * 110.00038 * 59.99853 * 3 2 1 34 34 H 1.48502 * 110.00192 * 181.31939 * 3 2 1 35 35 H 1.08005 * 126.47473 * 359.97438 * 5 4 2 36 36 H 1.08002 * 126.63743 * 179.83926 * 6 5 4 37 37 H 1.08004 * 119.86060 * 0.02562 * 9 8 7 38 38 H 1.07994 * 119.90818 * 180.23060 * 10 9 8 39 39 H 0.97010 * 119.99913 * 359.97438 * 14 12 11 40 40 H 1.08997 * 109.46317 * 299.99889 * 15 14 12 41 41 H 1.08996 * 109.46470 * 59.99106 * 15 14 12 42 42 H 1.09001 * 113.61507 * 254.53198 * 18 16 15 43 43 H 1.09004 * 113.61529 * 25.43268 * 18 16 15 44 44 H 1.07997 * 126.58919 * 359.97438 * 22 21 19 45 45 H 1.08003 * 125.98663 * 180.19348 * 23 22 21 46 46 H 1.07998 * 125.65349 * 179.97438 * 25 24 23 47 47 H 1.08999 * 113.61473 * 334.57150 * 26 16 15 48 48 H 1.09004 * 113.61656 * 105.47148 * 26 16 15 49 49 H 0.96691 * 114.00443 * 270.02927 * 28 27 11 50 50 H 1.08003 * 120.09644 * 180.02562 * 29 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7617 -2.0192 1.5067 6 6 2.3802 -2.2627 2.7478 7 6 2.9080 -1.0784 3.1618 8 6 3.6577 -0.8543 4.4128 9 6 3.8738 -1.9164 5.2977 10 6 4.5703 -1.7177 6.4539 11 6 5.0643 -0.4473 6.7679 12 6 5.8113 -0.2351 8.0194 13 8 6.2408 0.8698 8.2914 14 7 6.0189 -1.2652 8.8633 15 6 6.7614 -1.0541 10.1084 16 6 6.8537 -2.3736 10.8772 17 1 7.0990 -3.2206 10.2364 18 6 7.7205 -2.2888 12.1446 19 6 6.6680 -3.1770 12.8289 20 1 6.8623 -4.2443 12.7236 21 7 6.3780 -2.7851 14.2104 22 6 6.5393 -3.5618 15.3259 23 6 6.1595 -2.8140 16.3795 24 7 5.7679 -1.6167 15.9190 25 6 5.8960 -1.5921 14.6206 26 6 5.6567 -2.6294 11.8080 27 6 4.8474 0.6252 5.8880 28 8 5.3241 1.8596 6.1882 29 6 4.1453 0.4185 4.7149 30 8 2.6271 -0.1463 2.2303 31 1 -0.3933 0.4417 -0.7650 32 1 1.7924 -0.5139 -0.8899 33 1 1.5615 2.4679 1.2084 34 1 3.5346 1.7703 -0.0321 35 1 1.2458 -2.7432 0.8933 36 1 2.4304 -3.2076 3.2685 37 1 3.4913 -2.8987 5.0624 38 1 4.7368 -2.5426 7.1308 39 1 5.6759 -2.1464 8.6466 40 1 7.7648 -0.6971 9.8768 41 1 6.2442 -0.3137 10.7187 42 1 8.6943 -2.7671 12.0404 43 1 7.7837 -1.2846 12.5640 44 1 6.9034 -4.5781 15.3555 45 1 6.1653 -3.1253 17.4137 46 1 5.6559 -0.7564 13.9800 47 1 5.1556 -1.7184 12.1353 48 1 4.9643 -3.3827 11.4320 49 1 4.7076 2.4072 6.6931 50 1 3.9754 1.2392 4.0336 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:49:39 Heat of formation + Delta-G solvation = 40.926258 kcal Electronic energy + Delta-G solvation = -34846.248351 eV Core-core repulsion = 30002.719948 eV Total energy + Delta-G solvation = -4843.528403 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.156 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.80036 -43.11324 -41.61611 -40.46508 -39.43269 -38.09734 -37.86472 -35.76235 -34.34197 -33.80640 -33.23132 -31.44928 -30.77462 -30.30524 -29.00147 -27.20438 -26.94876 -24.95311 -24.19210 -24.04272 -22.53961 -22.45757 -21.97429 -21.84290 -21.33489 -20.46986 -19.75958 -18.98429 -18.78909 -18.31691 -18.01399 -17.44559 -17.15857 -17.05363 -16.55640 -16.43094 -16.21466 -16.12046 -15.92774 -15.91550 -15.51150 -15.16905 -14.96550 -14.78488 -14.54439 -14.46820 -14.44378 -14.25878 -14.13608 -13.96767 -13.91009 -13.65854 -13.63824 -13.52448 -13.24457 -12.85025 -12.72590 -12.44159 -12.12382 -12.05659 -11.93395 -11.88538 -11.19071 -10.86356 -10.85765 -10.76612 -10.54234 -10.49486 -10.21166 -10.03699 -9.41876 -9.07336 -5.16343 -0.85912 0.03276 0.58107 1.06458 1.10057 1.32217 1.49872 1.61394 1.73915 1.91771 1.96169 1.96621 2.31653 2.56514 2.92830 2.96683 3.05660 3.15935 3.29877 3.33165 3.43901 3.52816 3.56342 3.70553 3.72531 3.81533 3.83559 3.87848 3.94577 3.97459 4.05620 4.16349 4.22866 4.29769 4.31354 4.38020 4.47968 4.51417 4.56365 4.59734 4.62615 4.65909 4.71370 4.77308 4.81010 4.91547 4.93345 5.01564 5.09783 5.24991 5.32482 5.36188 5.38829 5.85073 5.91691 6.24840 6.32546 6.38696 6.62249 7.12526 7.19871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.706 3.294 4 C -0.002 4.002 5 C -0.168 4.168 6 C -0.174 4.174 7 C 0.020 3.980 8 C 0.032 3.968 9 C -0.116 4.116 10 C -0.064 4.064 11 C -0.166 4.166 12 C 0.559 3.441 13 O -0.516 6.516 14 N -0.729 5.729 15 C 0.132 3.868 16 C -0.121 4.121 17 H 0.106 0.894 18 C -0.135 4.135 19 C 0.108 3.892 20 H 0.125 0.875 21 N -0.450 5.450 22 C -0.057 4.057 23 C -0.030 4.030 24 N -0.493 5.493 25 C 0.181 3.819 26 C -0.140 4.140 27 C 0.180 3.820 28 O -0.474 6.474 29 C -0.142 4.142 30 O -0.169 6.169 31 H 0.391 0.609 32 H 0.097 0.903 33 H -0.249 1.249 34 H -0.252 1.252 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.140 0.860 38 H 0.137 0.863 39 H 0.399 0.601 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.086 0.914 43 H 0.097 0.903 44 H 0.173 0.827 45 H 0.170 0.830 46 H 0.200 0.800 47 H 0.096 0.904 48 H 0.084 0.916 49 H 0.399 0.601 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.975 -5.710 -6.452 8.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.605 3.395 4 C -0.051 4.051 5 C -0.187 4.187 6 C -0.193 4.193 7 C -0.029 4.029 8 C 0.031 3.969 9 C -0.134 4.134 10 C -0.082 4.082 11 C -0.169 4.169 12 C 0.346 3.654 13 O -0.392 6.392 14 N -0.382 5.382 15 C 0.009 3.991 16 C -0.140 4.140 17 H 0.124 0.876 18 C -0.174 4.174 19 C 0.005 3.995 20 H 0.143 0.857 21 N -0.132 5.132 22 C -0.190 4.190 23 C -0.177 4.177 24 N -0.211 5.211 25 C -0.101 4.101 26 C -0.178 4.178 27 C 0.133 3.867 28 O -0.286 6.286 29 C -0.161 4.161 30 O -0.066 6.066 31 H 0.240 0.760 32 H 0.114 0.886 33 H -0.173 1.173 34 H -0.176 1.176 35 H 0.176 0.824 36 H 0.176 0.824 37 H 0.158 0.842 38 H 0.154 0.846 39 H 0.235 0.765 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.105 0.895 43 H 0.115 0.885 44 H 0.191 0.809 45 H 0.187 0.813 46 H 0.217 0.783 47 H 0.115 0.885 48 H 0.103 0.897 49 H 0.258 0.742 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.751 -3.877 -5.164 6.500 hybrid contribution -0.285 -1.868 -0.258 1.907 sum -1.036 -5.744 -5.422 7.967 Atomic orbital electron populations 1.86462 1.16296 1.82003 1.50278 1.23795 0.86206 1.11715 0.92819 0.95257 0.81078 0.76193 0.87000 1.21465 1.00119 0.92629 0.90922 1.21556 1.03646 0.95598 0.97942 1.21910 1.01830 0.98321 0.97263 1.20350 1.04110 0.87643 0.90796 1.17766 0.95492 0.93708 0.89934 1.20702 1.00213 0.98659 0.93799 1.20801 0.95388 0.95491 0.96542 1.20464 1.04865 0.95074 0.96524 1.17949 0.79870 0.84550 0.83045 1.90861 1.49559 1.23605 1.75150 1.45873 1.58123 1.12356 1.21865 1.21329 0.97291 0.96140 0.84338 1.22642 0.97160 0.98603 0.95603 0.87553 1.23445 0.98305 1.01295 0.94345 1.23055 0.98004 1.00788 0.77700 0.85720 1.45579 1.48046 1.12672 1.06940 1.22786 1.10591 0.99334 0.86281 1.22371 1.05110 0.90899 0.99359 1.70342 1.20684 1.22077 1.08012 1.24858 1.02833 0.89977 0.92403 1.23565 0.96686 1.02660 0.94928 1.18271 0.91256 0.85823 0.91345 1.84772 1.44615 1.22740 1.76433 1.21578 0.98840 0.97499 0.98157 1.83962 1.57994 1.38135 1.26547 0.75983 0.88573 1.17283 1.17597 0.82431 0.82358 0.84242 0.84557 0.76529 0.90652 0.90844 0.89546 0.88468 0.80936 0.81324 0.78320 0.88541 0.89737 0.74187 0.84189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.40 12.86 -35.23 -0.45 -0.06 16 2 C -0.04 0.02 2.97 36.01 0.11 0.13 16 3 Si 0.71 -0.69 32.11 -169.99 -5.46 -6.15 16 4 C 0.00 0.00 6.24 -35.51 -0.22 -0.23 16 5 C -0.17 -0.27 10.78 -39.82 -0.43 -0.70 16 6 C -0.17 -0.18 10.26 -39.38 -0.40 -0.58 16 7 C 0.02 0.05 7.02 -36.55 -0.26 -0.21 16 8 C 0.03 0.04 5.87 -104.95 -0.62 -0.57 16 9 C -0.12 0.13 9.48 -39.60 -0.38 -0.24 16 10 C -0.06 0.11 9.47 -39.62 -0.38 -0.26 16 11 C -0.17 -0.17 5.89 -104.79 -0.62 -0.79 16 12 C 0.56 1.05 7.75 -12.58 -0.10 0.96 16 13 O -0.52 -2.97 15.14 -16.69 -0.25 -3.22 16 14 N -0.73 1.35 5.50 -61.43 -0.34 1.01 16 15 C 0.13 -0.31 5.51 -4.04 -0.02 -0.33 16 16 C -0.12 0.59 3.75 -89.81 -0.34 0.25 16 17 H 0.11 -0.64 8.14 -51.93 -0.42 -1.07 16 18 C -0.14 0.53 7.32 -25.92 -0.19 0.34 16 19 C 0.11 -0.38 4.64 -67.12 -0.31 -0.69 16 20 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 21 N -0.45 0.13 2.94 -110.59 -0.33 -0.19 16 22 C -0.06 -0.03 11.58 -16.56 -0.19 -0.22 16 23 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 24 N -0.49 -2.29 11.25 -14.66 -0.16 -2.46 16 25 C 0.18 0.28 11.37 -90.37 -1.03 -0.75 16 26 C -0.14 0.62 7.18 -25.92 -0.19 0.44 16 27 C 0.18 0.43 6.71 -38.75 -0.26 0.17 16 28 O -0.47 -1.48 11.56 -40.71 -0.47 -1.95 16 29 C -0.14 -0.31 9.65 -39.06 -0.38 -0.68 16 30 O -0.17 -0.66 8.79 4.72 0.04 -0.62 16 31 H 0.39 -2.43 8.74 45.56 0.40 -2.03 16 32 H 0.10 -0.30 7.96 -51.93 -0.41 -0.72 16 33 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 34 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 35 H 0.16 -0.05 8.06 -52.48 -0.42 -0.47 16 36 H 0.16 -0.30 7.24 -52.49 -0.38 -0.68 16 37 H 0.14 -0.51 6.95 -52.48 -0.36 -0.87 16 38 H 0.14 -0.72 6.37 -52.49 -0.33 -1.06 16 39 H 0.40 -1.88 6.48 -40.82 -0.26 -2.14 16 40 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.07 -0.11 7.84 -51.93 -0.41 -0.51 16 42 H 0.09 -0.36 8.14 -51.93 -0.42 -0.79 16 43 H 0.10 -0.29 7.86 -51.93 -0.41 -0.70 16 44 H 0.17 -0.41 8.06 -52.49 -0.42 -0.83 16 45 H 0.17 0.15 8.06 -52.48 -0.42 -0.28 16 46 H 0.20 -0.24 7.43 -52.49 -0.39 -0.63 16 47 H 0.10 -0.35 6.67 -51.93 -0.35 -0.70 16 48 H 0.08 -0.42 8.14 -51.93 -0.42 -0.85 16 49 H 0.40 -0.27 9.06 45.56 0.41 0.15 16 50 H 0.14 0.31 7.90 -52.48 -0.41 -0.10 16 LS Contribution 425.10 15.07 6.41 6.41 Total: 0.00 -14.81 425.10 -12.91 -27.72 By element: Atomic # 1 Polarization: -10.74 SS G_CDS: -5.49 Total: -16.24 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -6.40 Total: -4.26 kcal Atomic # 7 Polarization: -0.81 SS G_CDS: -0.83 Total: -1.64 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -1.13 Total: -5.85 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.46 Total: -6.15 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -14.81 -12.91 -27.72 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.646 kcal (2) G-P(sol) polarization free energy of solvation -14.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.835 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.720 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds