Wall clock time and date at job start Sun Mar 7 2021 07:49:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.39277 * 121.02950 * 2 1 4 4 C 1.46499 * 134.20282 * 359.97438 * 3 2 1 5 5 C 1.50699 * 126.60064 * 0.02562 * 4 3 2 6 6 O 1.42903 * 109.46646 * 284.99838 * 5 4 3 7 7 Si 1.86298 * 109.47341 * 165.00107 * 5 4 3 8 8 C 1.34186 * 106.80013 * 180.02562 * 4 3 2 9 9 N 1.36945 * 109.95260 * 359.97438 * 8 4 3 10 10 C 1.37151 * 110.11404 * 359.97438 * 9 8 4 11 11 N 1.32819 * 132.96147 * 179.97438 * 10 9 8 12 12 C 1.31313 * 121.88958 * 179.74799 * 11 10 9 13 13 C 1.39748 * 121.02936 * 180.02562 * 2 1 3 14 14 C 1.47669 * 120.45320 * 359.95198 * 13 2 1 15 15 O 1.21572 * 120.00060 * 354.20492 * 14 13 2 16 16 N 1.34782 * 119.99551 * 174.20681 * 14 13 2 17 17 C 1.46500 * 119.99528 * 180.02562 * 16 14 13 18 18 C 1.53005 * 109.46875 * 179.97438 * 17 16 14 19 19 H 1.08998 * 112.85099 * 316.19934 * 18 17 16 20 20 C 1.53783 * 113.68800 * 87.46489 * 18 17 16 21 21 C 1.54046 * 87.07450 * 139.98970 * 20 18 17 22 22 H 1.08996 * 113.61731 * 89.07335 * 21 20 18 23 23 N 1.46504 * 113.69367 * 220.05464 * 21 20 18 24 24 C 1.36889 * 126.39468 * 217.42671 * 23 21 20 25 25 C 1.34673 * 106.81582 * 179.97438 * 24 23 21 26 26 N 1.34127 * 108.01923 * 359.97438 * 25 24 23 27 27 C 1.30498 * 109.25874 * 359.72931 * 26 25 24 28 28 C 1.53776 * 113.61282 * 184.99843 * 18 17 16 29 29 H 1.08997 * 109.47135 * 263.74510 * 1 2 3 30 30 H 1.09007 * 109.47265 * 23.74351 * 1 2 3 31 31 H 1.08999 * 109.47362 * 143.74269 * 1 2 3 32 32 H 1.09001 * 109.47112 * 44.99830 * 5 4 3 33 33 H 0.96701 * 113.99968 * 299.99617 * 6 5 4 34 34 H 1.48503 * 110.00054 * 179.97438 * 7 5 4 35 35 H 1.48500 * 110.00033 * 301.31869 * 7 5 4 36 36 H 1.08002 * 125.01748 * 180.02562 * 8 4 3 37 37 H 0.97002 * 124.93803 * 180.02562 * 9 8 4 38 38 H 1.07997 * 119.31449 * 180.28408 * 12 11 10 39 39 H 0.97000 * 120.00020 * 359.97438 * 16 14 13 40 40 H 1.08996 * 109.47517 * 59.99662 * 17 16 14 41 41 H 1.08997 * 109.47240 * 299.99912 * 17 16 14 42 42 H 1.09001 * 113.61376 * 254.53808 * 20 18 17 43 43 H 1.08992 * 113.61565 * 25.44440 * 20 18 17 44 44 H 1.07994 * 126.59273 * 0.02562 * 24 23 21 45 45 H 1.07995 * 125.98775 * 179.97438 * 25 24 23 46 46 H 1.08000 * 125.64967 * 180.29701 * 27 26 25 47 47 H 1.09000 * 113.61668 * 334.48791 * 28 18 17 48 48 H 1.08998 * 113.61677 * 105.30677 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1935 0.0000 4 6 1.8515 2.6101 -0.0005 5 6 0.4526 3.1705 -0.0006 6 8 -0.1192 3.0235 -1.3020 7 14 0.5071 4.9765 0.4533 8 6 2.9948 3.3125 -0.0008 9 7 4.0669 2.4604 0.0000 10 6 3.6347 1.1588 0.0015 11 7 4.2720 -0.0066 0.0022 12 6 3.6266 -1.1501 0.0086 13 6 2.2274 -1.1975 -0.0005 14 6 1.5224 -2.4950 0.0000 15 8 0.3119 -2.5291 0.1071 16 7 2.2210 -3.6415 -0.1184 17 6 1.5215 -4.9288 -0.1185 18 6 2.5390 -6.0620 -0.2653 19 1 3.2958 -5.8559 -1.0221 20 6 3.1218 -6.5463 1.0728 21 6 3.0230 -7.9761 0.5080 22 1 3.9118 -8.2925 -0.0378 23 7 2.5735 -8.9669 1.4892 24 6 3.0168 -10.2571 1.6021 25 6 2.3444 -10.8116 2.6288 26 7 1.5137 -9.8851 3.1294 27 6 1.6499 -8.7758 2.4557 28 6 1.8968 -7.4529 -0.3991 29 1 -0.3633 -0.1120 1.0215 30 1 -0.3634 0.9407 -0.4138 31 1 -0.3634 -0.8287 -0.6078 32 1 -0.1549 2.6313 0.7263 33 1 0.3706 3.4787 -2.0005 34 1 -0.8664 5.5412 0.4561 35 1 1.1289 5.1454 1.7913 36 1 3.0598 4.3906 -0.0007 37 1 4.9965 2.7373 0.0004 38 1 4.1869 -2.0734 0.0136 39 1 3.1868 -3.6143 -0.2042 40 1 0.8196 -4.9609 -0.9517 41 1 0.9781 -5.0471 0.8190 42 1 4.1456 -6.2159 1.2482 43 1 2.4663 -6.3672 1.9249 44 1 3.7629 -10.7377 0.9868 45 1 2.4547 -11.8247 2.9863 46 1 1.1112 -7.8579 2.6389 47 1 0.9063 -7.5216 0.0507 48 1 1.9303 -7.8538 -1.4121 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:49:43 Heat of formation + Delta-G solvation = 104.903612 kcal Electronic energy + Delta-G solvation = -32100.349734 eV Core-core repulsion = 27738.796681 eV Total energy + Delta-G solvation = -4361.553053 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.08006 -42.87228 -41.05511 -40.06303 -38.70548 -37.79519 -35.98936 -34.85164 -33.50433 -31.99477 -31.36500 -30.27922 -29.13992 -28.42509 -27.14176 -26.49539 -25.02320 -24.38193 -23.67853 -22.48120 -21.92760 -21.73216 -20.73043 -20.37394 -19.29357 -19.04409 -18.33082 -17.62526 -17.52901 -17.17865 -16.89315 -16.73199 -16.33835 -16.14728 -16.00284 -15.65159 -15.49688 -15.20876 -15.16281 -14.80634 -14.64203 -14.55065 -14.39550 -14.08969 -13.88832 -13.86577 -13.77274 -13.58014 -13.51908 -13.27481 -13.17163 -12.95650 -12.39687 -12.29658 -12.08562 -11.98897 -11.86367 -11.09446 -11.05957 -10.83170 -10.52194 -10.46209 -10.22286 -10.16256 -9.62008 -9.39266 -9.16825 -5.15198 -0.26163 -0.08900 1.12857 1.21512 1.34926 1.53943 1.62279 1.77451 1.89509 1.93083 2.03559 2.34194 2.82195 3.00493 3.09730 3.24198 3.35143 3.37234 3.41776 3.49056 3.57873 3.69394 3.73668 3.77621 3.84772 3.98134 4.01297 4.06240 4.20849 4.25145 4.27239 4.35542 4.42587 4.48233 4.54587 4.59461 4.62840 4.67010 4.70165 4.75094 4.83806 4.92880 4.97847 5.02867 5.16517 5.28905 5.39001 5.41333 5.54648 5.75091 5.87656 6.06639 6.27777 6.39433 6.58094 6.81857 7.19231 7.22528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.085 3.915 3 C -0.149 4.149 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.538 6.538 7 Si 0.686 3.314 8 C 0.070 3.930 9 N -0.570 5.570 10 C 0.307 3.693 11 N -0.504 5.504 12 C 0.180 3.820 13 C -0.234 4.234 14 C 0.571 3.429 15 O -0.528 6.528 16 N -0.729 5.729 17 C 0.133 3.867 18 C -0.121 4.121 19 H 0.107 0.893 20 C -0.140 4.140 21 C 0.107 3.893 22 H 0.125 0.875 23 N -0.449 5.449 24 C -0.057 4.057 25 C -0.030 4.030 26 N -0.494 5.494 27 C 0.182 3.818 28 C -0.135 4.135 29 H 0.080 0.920 30 H 0.084 0.916 31 H 0.099 0.901 32 H 0.116 0.884 33 H 0.378 0.622 34 H -0.252 1.252 35 H -0.255 1.255 36 H 0.186 0.814 37 H 0.426 0.574 38 H 0.161 0.839 39 H 0.399 0.601 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.084 0.916 43 H 0.096 0.904 44 H 0.173 0.827 45 H 0.169 0.831 46 H 0.200 0.800 47 H 0.096 0.904 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.320 4.609 -4.826 9.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C 0.077 3.923 3 C -0.156 4.156 4 C -0.189 4.189 5 C -0.148 4.148 6 O -0.343 6.343 7 Si 0.587 3.413 8 C -0.056 4.056 9 N -0.175 5.175 10 C 0.074 3.926 11 N -0.217 5.217 12 C 0.011 3.989 13 C -0.242 4.242 14 C 0.359 3.641 15 O -0.405 6.405 16 N -0.382 5.382 17 C 0.010 3.990 18 C -0.140 4.140 19 H 0.125 0.875 20 C -0.178 4.178 21 C 0.004 3.996 22 H 0.143 0.857 23 N -0.132 5.132 24 C -0.190 4.190 25 C -0.178 4.178 26 N -0.211 5.211 27 C -0.101 4.101 28 C -0.174 4.174 29 H 0.098 0.902 30 H 0.103 0.897 31 H 0.117 0.883 32 H 0.133 0.867 33 H 0.225 0.775 34 H -0.177 1.177 35 H -0.180 1.180 36 H 0.203 0.797 37 H 0.264 0.736 38 H 0.178 0.822 39 H 0.234 0.766 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.103 0.897 43 H 0.114 0.886 44 H 0.191 0.809 45 H 0.187 0.813 46 H 0.217 0.783 47 H 0.115 0.885 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 5.271 4.978 -3.280 7.957 hybrid contribution 0.915 -0.483 -0.526 1.161 sum 6.186 4.495 -3.807 8.542 Atomic orbital electron populations 1.21280 0.88816 1.05103 1.03788 1.19927 0.97171 0.89189 0.86029 1.19479 0.92791 0.93553 1.09772 1.20687 0.95354 0.91082 1.11734 1.24464 0.90411 1.10739 0.89139 1.86517 1.53761 1.77845 1.16201 0.95308 0.84457 0.76649 0.84857 1.21737 0.84971 0.95807 1.03088 1.41514 1.09630 1.02697 1.63695 1.18494 0.89346 0.85897 0.98846 1.66431 1.40570 0.96023 1.18666 1.22486 0.90051 0.94428 0.91914 1.20421 0.94746 0.93738 1.15264 1.17868 0.86809 0.83247 0.76153 1.90773 1.13531 1.87027 1.49195 1.45852 1.10745 1.05696 1.75871 1.21319 0.94171 0.80544 1.03005 1.22642 0.98830 0.94122 0.98407 0.87515 1.23611 1.03302 0.93072 0.97849 1.23105 0.99213 0.87199 0.90104 0.85731 1.45577 1.31348 1.10584 1.25688 1.22785 1.06014 0.85636 1.04568 1.22368 0.97997 1.00118 0.97302 1.70339 1.23206 1.00031 1.27573 1.24862 0.95562 0.99928 0.89704 1.23434 0.98742 0.94220 1.00973 0.90160 0.89731 0.88293 0.86708 0.77456 1.17655 1.17958 0.79686 0.73564 0.82162 0.76561 0.90658 0.90837 0.89702 0.88551 0.80948 0.81347 0.78298 0.88503 0.89600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.39 8.46 36.01 0.30 -0.08 16 2 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 3 C -0.15 -0.32 6.16 -105.13 -0.65 -0.97 16 4 C -0.18 0.05 5.57 -102.72 -0.57 -0.52 16 5 C -0.04 0.03 1.88 36.01 0.07 0.10 16 6 O -0.54 0.27 11.67 -35.23 -0.41 -0.14 16 7 Si 0.69 -1.69 30.76 -169.99 -5.23 -6.92 16 8 C 0.07 -0.19 10.44 -16.70 -0.17 -0.36 16 9 N -0.57 0.85 6.04 -12.12 -0.07 0.78 16 10 C 0.31 0.54 8.42 -155.72 -1.31 -0.77 16 11 N -0.50 -1.01 10.37 -11.96 -0.12 -1.13 16 12 C 0.18 0.06 10.67 -17.11 -0.18 -0.12 16 13 C -0.23 -0.40 5.89 -104.82 -0.62 -1.02 16 14 C 0.57 0.98 7.72 -12.41 -0.10 0.88 16 15 O -0.53 -2.59 13.49 5.30 0.07 -2.52 16 16 N -0.73 1.39 5.51 -61.31 -0.34 1.05 16 17 C 0.13 -0.33 5.51 -4.04 -0.02 -0.35 16 18 C -0.12 0.59 3.75 -89.81 -0.34 0.25 16 19 H 0.11 -0.64 8.14 -51.93 -0.42 -1.06 16 20 C -0.14 0.60 7.20 -25.78 -0.19 0.42 16 21 C 0.11 -0.37 4.66 -66.98 -0.31 -0.68 16 22 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 23 N -0.45 0.08 2.95 -110.44 -0.33 -0.25 16 24 C -0.06 -0.04 11.58 -16.56 -0.19 -0.23 16 25 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 26 N -0.49 -2.35 11.25 -14.67 -0.17 -2.52 16 27 C 0.18 0.30 11.39 -90.38 -1.03 -0.73 16 28 C -0.13 0.53 7.31 -25.92 -0.19 0.34 16 29 H 0.08 0.23 8.14 -51.93 -0.42 -0.19 16 30 H 0.08 0.22 4.79 -51.92 -0.25 -0.03 16 31 H 0.10 0.41 5.95 -51.93 -0.31 0.10 16 32 H 0.12 0.03 7.13 -51.93 -0.37 -0.34 16 33 H 0.38 -1.68 8.70 45.56 0.40 -1.29 16 34 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 35 H -0.25 -0.01 7.11 56.52 0.40 0.40 16 36 H 0.19 -1.24 6.35 -52.49 -0.33 -1.58 16 37 H 0.43 -1.73 8.96 -40.82 -0.37 -2.09 16 38 H 0.16 -0.55 6.43 -52.49 -0.34 -0.89 16 39 H 0.40 -1.81 6.55 -40.82 -0.27 -2.07 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.11 7.85 -51.93 -0.41 -0.52 16 42 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 43 H 0.10 -0.34 6.68 -51.93 -0.35 -0.68 16 44 H 0.17 -0.39 8.06 -52.49 -0.42 -0.81 16 45 H 0.17 0.17 8.06 -52.49 -0.42 -0.26 16 46 H 0.20 -0.22 7.42 -52.49 -0.39 -0.61 16 47 H 0.10 -0.29 7.87 -51.93 -0.41 -0.70 16 48 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 LS Contribution 390.36 15.07 5.88 5.88 Total: 0.00 -12.96 390.36 -13.01 -25.97 By element: Atomic # 1 Polarization: -9.70 SS G_CDS: -5.97 Total: -15.67 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -6.33 Total: -4.52 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -1.03 Total: -2.07 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.34 Total: -2.66 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.23 Total: -6.92 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -12.96 -13.01 -25.97 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.871 kcal (2) G-P(sol) polarization free energy of solvation -12.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.967 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds