Wall clock time and date at job start Sun Mar 7 2021 07:50:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38975 * 119.95845 * 2 1 4 4 O 1.35712 * 119.91108 * 359.97438 * 3 2 1 5 5 C 1.39013 * 120.17560 * 180.02562 * 3 2 1 6 6 C 1.50707 * 119.95379 * 179.97438 * 5 3 2 7 7 O 1.42904 * 109.46934 * 75.02371 * 6 5 3 8 8 Si 1.86303 * 109.47034 * 195.02045 * 6 5 3 9 9 C 1.37678 * 120.09247 * 0.02562 * 5 3 2 10 10 C 1.39753 * 119.90825 * 359.97438 * 9 5 3 11 11 C 1.47610 * 120.08653 * 180.02562 * 10 9 5 12 12 O 1.21580 * 119.99704 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99977 * 180.02562 * 11 10 9 14 14 C 1.46493 * 119.99981 * 179.97438 * 13 11 10 15 15 C 1.53003 * 109.47111 * 180.02562 * 14 13 11 16 16 H 1.08997 * 112.91098 * 43.75037 * 15 14 13 17 17 C 1.53781 * 113.61480 * 175.00222 * 15 14 13 18 18 C 1.53786 * 87.17350 * 139.93948 * 17 15 14 19 19 H 1.08993 * 113.61491 * 89.15923 * 18 17 15 20 20 N 1.46501 * 113.61366 * 220.06429 * 18 17 15 21 21 C 1.36884 * 126.39307 * 239.99977 * 20 18 17 22 22 C 1.34673 * 106.81596 * 179.97438 * 21 20 18 23 23 N 1.34130 * 108.02054 * 359.97438 * 22 21 20 24 24 C 1.30502 * 109.25449 * 359.73047 * 23 22 21 25 25 C 1.53782 * 113.61259 * 272.50057 * 15 14 13 26 26 C 1.37729 * 119.95483 * 180.29970 * 2 1 3 27 27 H 1.09002 * 109.47000 * 89.99922 * 1 2 3 28 28 H 1.09001 * 109.47413 * 210.00073 * 1 2 3 29 29 H 1.09004 * 109.47137 * 330.00423 * 1 2 3 30 30 H 0.96698 * 114.00274 * 270.02194 * 4 3 2 31 31 H 1.08999 * 109.47144 * 315.01848 * 6 5 3 32 32 H 0.96692 * 114.00023 * 60.00040 * 7 6 5 33 33 H 1.48502 * 109.99890 * 58.68460 * 8 6 5 34 34 H 1.48497 * 109.99913 * 180.02562 * 8 6 5 35 35 H 1.07997 * 120.04683 * 179.97438 * 9 5 3 36 36 H 0.97001 * 119.99565 * 0.02562 * 13 11 10 37 37 H 1.08994 * 109.47006 * 60.00362 * 14 13 11 38 38 H 1.09002 * 109.47617 * 299.99816 * 14 13 11 39 39 H 1.09002 * 113.61445 * 254.52948 * 17 15 14 40 40 H 1.09002 * 113.61408 * 25.34678 * 17 15 14 41 41 H 1.07997 * 126.59138 * 0.03584 * 21 20 18 42 42 H 1.07991 * 125.99121 * 179.97438 * 22 21 20 43 43 H 1.08003 * 125.64823 * 180.29226 * 24 23 22 44 44 H 1.08997 * 113.61668 * 334.56352 * 25 15 14 45 45 H 1.08994 * 113.61387 * 105.47087 * 25 15 14 46 46 H 1.07999 * 120.04261 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2093 -0.0005 6 6 4.3386 2.5179 -0.0011 7 8 4.2731 3.1045 1.3003 8 14 6.1195 2.2156 -0.4570 9 6 4.2859 0.0207 -0.0016 10 6 3.5918 -1.1922 -0.0016 11 6 4.3327 -2.4689 -0.0022 12 8 5.5485 -2.4660 -0.0031 13 7 3.6615 -3.6376 -0.0027 14 6 4.3969 -4.9046 -0.0038 15 6 3.4053 -6.0698 -0.0049 16 1 2.5780 -5.9223 -0.6990 17 6 4.0751 -7.4485 -0.1289 18 6 3.0522 -7.9535 0.9026 19 1 2.1283 -8.3220 0.4570 20 7 3.6193 -8.8788 1.8868 21 6 3.2291 -10.1727 2.1040 22 6 4.0091 -10.6545 3.0906 23 7 4.8529 -9.6814 3.4650 24 6 4.6292 -8.6168 2.7441 25 6 2.9593 -6.5003 1.4025 26 6 2.1947 -1.1933 -0.0062 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8901 0.5138 30 1 1.3223 2.7176 -0.8840 31 1 3.8874 3.1938 -0.7275 32 1 4.6573 2.5568 1.9984 33 1 6.1998 1.5765 -1.7950 34 1 6.8677 3.4983 -0.4605 35 1 5.3659 0.0257 -0.0024 36 1 2.6915 -3.6397 -0.0031 37 1 5.0239 -4.9615 0.8859 38 1 5.0234 -4.9604 -0.8941 39 1 3.9622 -7.9018 -1.1137 40 1 5.1039 -7.4681 0.2307 41 1 2.4469 -10.7053 1.5836 42 1 3.9633 -11.6497 3.5072 43 1 5.1617 -7.6804 2.8222 44 1 3.6825 -6.2611 2.1820 45 1 1.9457 -6.1881 1.6538 46 1 1.6546 -2.1286 -0.0107 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:50:15 Heat of formation + Delta-G solvation = 11.484420 kcal Electronic energy + Delta-G solvation = -29107.221368 eV Core-core repulsion = 24965.776885 eV Total energy + Delta-G solvation = -4141.444483 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.11506 -41.78778 -40.74411 -39.89351 -37.87134 -37.55154 -35.91549 -34.10222 -33.54279 -32.03675 -30.32836 -29.02169 -28.16218 -27.19972 -26.90101 -25.24989 -24.02248 -22.54435 -22.17232 -21.92333 -21.48357 -20.40862 -19.66187 -19.08022 -18.32030 -18.11718 -17.40296 -17.05690 -16.93258 -16.49642 -16.27566 -16.09221 -15.96614 -15.55807 -15.27119 -15.14363 -14.84685 -14.81478 -14.59673 -14.45571 -14.40977 -14.17161 -13.99483 -13.92056 -13.61486 -13.39852 -13.32898 -13.10125 -12.86294 -12.45294 -12.34503 -12.07700 -12.03511 -11.92803 -11.69884 -11.05868 -10.86067 -10.49932 -10.44187 -10.30210 -10.07646 -9.74397 -9.42241 -5.01353 -0.46832 -0.02160 1.09610 1.23523 1.57604 1.64814 1.73041 1.93083 1.94804 2.31385 2.50707 2.94492 2.97624 3.03618 3.27996 3.30350 3.31860 3.46122 3.49892 3.64037 3.70266 3.81346 3.86021 3.92537 3.96477 4.08485 4.19859 4.21394 4.30394 4.35177 4.37539 4.44688 4.48247 4.52436 4.55579 4.56432 4.62652 4.63925 4.80264 4.90201 4.91759 4.98454 5.00679 5.18677 5.19973 5.35485 5.43812 5.84677 6.24513 6.27476 6.47648 6.55982 7.04520 7.19603 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.118 4.118 3 C 0.161 3.839 4 O -0.483 6.483 5 C -0.151 4.151 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.044 4.044 10 C -0.139 4.139 11 C 0.561 3.439 12 O -0.529 6.529 13 N -0.726 5.726 14 C 0.131 3.869 15 C -0.121 4.121 16 H 0.106 0.894 17 C -0.135 4.135 18 C 0.108 3.892 19 H 0.125 0.875 20 N -0.450 5.450 21 C -0.058 4.058 22 C -0.030 4.030 23 N -0.493 5.493 24 C 0.182 3.818 25 C -0.140 4.140 26 C -0.066 4.066 27 H 0.073 0.927 28 H 0.071 0.929 29 H 0.078 0.922 30 H 0.393 0.607 31 H 0.112 0.888 32 H 0.378 0.622 33 H -0.255 1.255 34 H -0.249 1.249 35 H 0.146 0.854 36 H 0.400 0.600 37 H 0.075 0.925 38 H 0.076 0.924 39 H 0.086 0.914 40 H 0.097 0.903 41 H 0.173 0.827 42 H 0.169 0.831 43 H 0.201 0.799 44 H 0.097 0.903 45 H 0.084 0.916 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.879 -1.345 -3.652 7.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.118 4.118 3 C 0.115 3.885 4 O -0.294 6.294 5 C -0.152 4.152 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.063 4.063 10 C -0.142 4.142 11 C 0.348 3.652 12 O -0.406 6.406 13 N -0.379 5.379 14 C 0.008 3.992 15 C -0.140 4.140 16 H 0.124 0.876 17 C -0.174 4.174 18 C 0.004 3.996 19 H 0.143 0.857 20 N -0.133 5.133 21 C -0.190 4.190 22 C -0.177 4.177 23 N -0.211 5.211 24 C -0.100 4.100 25 C -0.178 4.178 26 C -0.085 4.085 27 H 0.091 0.909 28 H 0.090 0.910 29 H 0.097 0.903 30 H 0.251 0.749 31 H 0.129 0.871 32 H 0.225 0.775 33 H -0.179 1.179 34 H -0.174 1.174 35 H 0.163 0.837 36 H 0.236 0.764 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.104 0.896 40 H 0.116 0.884 41 H 0.190 0.810 42 H 0.187 0.813 43 H 0.217 0.783 44 H 0.115 0.885 45 H 0.103 0.897 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -4.068 -0.751 -3.429 5.373 hybrid contribution -1.879 0.109 -1.379 2.333 sum -5.947 -0.642 -4.808 7.674 Atomic orbital electron populations 1.20741 0.89705 1.03910 1.02794 1.20221 0.97330 0.92108 1.02153 1.18319 0.88815 0.85293 0.96074 1.84788 1.75616 1.35683 1.33301 1.20698 0.93939 0.96088 1.04519 1.24867 1.09352 0.92806 0.89581 1.86556 1.84527 1.46644 1.15886 0.94639 0.77300 0.83907 0.86366 1.20948 1.00022 0.90145 0.95171 1.19798 0.93447 0.93396 1.07568 1.18124 0.87227 0.83535 0.76288 1.90825 1.13223 1.87497 1.49102 1.45859 1.10421 1.05572 1.76062 1.21358 0.93841 0.80750 1.03267 1.22641 0.99327 0.94119 0.97946 0.87589 1.23441 0.99562 0.94416 0.99969 1.23075 0.98350 0.88642 0.89503 0.85746 1.45571 1.27730 1.11070 1.28879 1.22784 1.05680 0.85874 1.04663 1.22374 0.96626 0.99823 0.98925 1.70346 1.25147 1.00054 1.25557 1.24865 0.92922 1.00483 0.91761 1.23599 1.03773 0.93115 0.97343 1.21083 0.92560 0.97772 0.97101 0.90877 0.91032 0.90325 0.74904 0.87075 0.77479 1.17890 1.17389 0.83736 0.76410 0.90654 0.90574 0.89580 0.88444 0.80952 0.81329 0.78276 0.88497 0.89738 0.85063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.33 9.78 36.00 0.35 0.68 16 2 C -0.12 0.15 5.89 -104.54 -0.62 -0.47 16 3 C 0.16 -0.01 6.66 -39.02 -0.26 -0.27 16 4 O -0.48 0.14 11.84 -18.84 -0.22 -0.08 16 5 C -0.15 -0.01 5.27 -104.54 -0.55 -0.57 16 6 C -0.05 0.00 2.37 36.01 0.09 0.08 16 7 O -0.53 -0.58 12.88 -35.23 -0.45 -1.03 16 8 Si 0.68 -0.09 29.91 -169.99 -5.08 -5.17 16 9 C -0.04 -0.01 8.20 -39.22 -0.32 -0.33 16 10 C -0.14 0.04 5.88 -104.96 -0.62 -0.58 16 11 C 0.56 0.34 7.76 -12.44 -0.10 0.24 16 12 O -0.53 -2.24 16.34 5.30 0.09 -2.16 16 13 N -0.73 2.00 5.51 -61.33 -0.34 1.67 16 14 C 0.13 -0.42 5.51 -4.04 -0.02 -0.44 16 15 C -0.12 0.67 3.76 -89.80 -0.34 0.33 16 16 H 0.11 -0.71 8.14 -51.93 -0.42 -1.13 16 17 C -0.14 0.61 7.31 -25.92 -0.19 0.42 16 18 C 0.11 -0.43 4.65 -67.02 -0.31 -0.74 16 19 H 0.12 -0.65 8.14 -51.93 -0.42 -1.08 16 20 N -0.45 0.31 2.95 -110.49 -0.33 -0.02 16 21 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 22 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 23 N -0.49 -2.13 11.25 -14.67 -0.17 -2.29 16 24 C 0.18 0.20 11.36 -90.38 -1.03 -0.82 16 25 C -0.14 0.69 7.20 -25.82 -0.19 0.50 16 26 C -0.07 0.14 9.18 -39.22 -0.36 -0.22 16 27 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.07 -0.28 8.09 -51.93 -0.42 -0.70 16 29 H 0.08 -0.15 7.52 -51.93 -0.39 -0.54 16 30 H 0.39 -1.78 9.06 45.56 0.41 -1.36 16 31 H 0.11 -0.02 7.82 -51.93 -0.41 -0.42 16 32 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 33 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 34 H -0.25 -0.69 7.11 56.52 0.40 -0.28 16 35 H 0.15 -0.02 4.70 -52.49 -0.25 -0.27 16 36 H 0.40 -2.15 6.49 -40.82 -0.27 -2.41 16 37 H 0.08 -0.18 7.84 -51.93 -0.41 -0.58 16 38 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 40 H 0.10 -0.35 7.85 -51.93 -0.41 -0.76 16 41 H 0.17 -0.46 8.06 -52.49 -0.42 -0.88 16 42 H 0.17 0.10 8.06 -52.49 -0.42 -0.32 16 43 H 0.20 -0.34 7.45 -52.48 -0.39 -0.73 16 44 H 0.10 -0.40 6.69 -51.93 -0.35 -0.75 16 45 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 46 H 0.13 -0.67 6.39 -52.49 -0.34 -1.01 16 LS Contribution 382.70 15.07 5.77 5.77 Total: 0.00 -11.96 382.70 -10.98 -22.95 By element: Atomic # 1 Polarization: -11.58 SS G_CDS: -5.39 Total: -16.97 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -4.86 Total: -2.66 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -0.83 Total: -0.64 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -0.59 Total: -3.27 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.08 Total: -5.17 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -11.96 -10.98 -22.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.432 kcal (2) G-P(sol) polarization free energy of solvation -11.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.947 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds