Wall clock time and date at job start Sun Mar 7 2021 07:50:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38975 * 119.95845 * 2 1 4 4 O 1.35712 * 119.91108 * 359.97438 * 3 2 1 5 5 C 1.39013 * 120.17560 * 180.02562 * 3 2 1 6 6 C 1.50707 * 119.95379 * 179.97438 * 5 3 2 7 7 O 1.42904 * 109.46934 * 75.02371 * 6 5 3 8 8 Si 1.86303 * 109.47034 * 195.02045 * 6 5 3 9 9 C 1.37678 * 120.09247 * 0.02562 * 5 3 2 10 10 C 1.39753 * 119.90825 * 359.97438 * 9 5 3 11 11 C 1.47610 * 120.08653 * 180.02562 * 10 9 5 12 12 O 1.21580 * 119.99704 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99977 * 180.02562 * 11 10 9 14 14 C 1.46493 * 119.99981 * 179.97438 * 13 11 10 15 15 C 1.53003 * 109.47111 * 180.02562 * 14 13 11 16 16 H 1.08997 * 112.91098 * 43.75037 * 15 14 13 17 17 C 1.53781 * 113.61480 * 175.00222 * 15 14 13 18 18 C 1.53786 * 87.17350 * 139.93948 * 17 15 14 19 19 H 1.08993 * 113.61491 * 89.15923 * 18 17 15 20 20 N 1.46501 * 113.61366 * 220.06429 * 18 17 15 21 21 C 1.36884 * 126.39307 * 239.99977 * 20 18 17 22 22 C 1.34673 * 106.81596 * 179.97438 * 21 20 18 23 23 N 1.34130 * 108.02054 * 359.97438 * 22 21 20 24 24 C 1.30502 * 109.25449 * 359.73047 * 23 22 21 25 25 C 1.53782 * 113.61259 * 272.50057 * 15 14 13 26 26 C 1.37729 * 119.95483 * 180.29970 * 2 1 3 27 27 H 1.09002 * 109.47000 * 89.99922 * 1 2 3 28 28 H 1.09001 * 109.47413 * 210.00073 * 1 2 3 29 29 H 1.09004 * 109.47137 * 330.00423 * 1 2 3 30 30 H 0.96698 * 114.00274 * 270.02194 * 4 3 2 31 31 H 1.08999 * 109.47144 * 315.01848 * 6 5 3 32 32 H 0.96692 * 114.00023 * 60.00040 * 7 6 5 33 33 H 1.48502 * 109.99890 * 58.68460 * 8 6 5 34 34 H 1.48497 * 109.99913 * 180.02562 * 8 6 5 35 35 H 1.07997 * 120.04683 * 179.97438 * 9 5 3 36 36 H 0.97001 * 119.99565 * 0.02562 * 13 11 10 37 37 H 1.08994 * 109.47006 * 60.00362 * 14 13 11 38 38 H 1.09002 * 109.47617 * 299.99816 * 14 13 11 39 39 H 1.09002 * 113.61445 * 254.52948 * 17 15 14 40 40 H 1.09002 * 113.61408 * 25.34678 * 17 15 14 41 41 H 1.07997 * 126.59138 * 0.03584 * 21 20 18 42 42 H 1.07991 * 125.99121 * 179.97438 * 22 21 20 43 43 H 1.08003 * 125.64823 * 180.29226 * 24 23 22 44 44 H 1.08997 * 113.61668 * 334.56352 * 25 15 14 45 45 H 1.08994 * 113.61387 * 105.47087 * 25 15 14 46 46 H 1.07999 * 120.04261 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2093 -0.0005 6 6 4.3386 2.5179 -0.0011 7 8 4.2731 3.1045 1.3003 8 14 6.1195 2.2156 -0.4570 9 6 4.2859 0.0207 -0.0016 10 6 3.5918 -1.1922 -0.0016 11 6 4.3327 -2.4689 -0.0022 12 8 5.5485 -2.4660 -0.0031 13 7 3.6615 -3.6376 -0.0027 14 6 4.3969 -4.9046 -0.0038 15 6 3.4053 -6.0698 -0.0049 16 1 2.5780 -5.9223 -0.6990 17 6 4.0751 -7.4485 -0.1289 18 6 3.0522 -7.9535 0.9026 19 1 2.1283 -8.3220 0.4570 20 7 3.6193 -8.8788 1.8868 21 6 3.2291 -10.1727 2.1040 22 6 4.0091 -10.6545 3.0906 23 7 4.8529 -9.6814 3.4650 24 6 4.6292 -8.6168 2.7441 25 6 2.9593 -6.5003 1.4025 26 6 2.1947 -1.1933 -0.0062 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8901 0.5138 30 1 1.3223 2.7176 -0.8840 31 1 3.8874 3.1938 -0.7275 32 1 4.6573 2.5568 1.9984 33 1 6.1998 1.5765 -1.7950 34 1 6.8677 3.4983 -0.4605 35 1 5.3659 0.0257 -0.0024 36 1 2.6915 -3.6397 -0.0031 37 1 5.0239 -4.9615 0.8859 38 1 5.0234 -4.9604 -0.8941 39 1 3.9622 -7.9018 -1.1137 40 1 5.1039 -7.4681 0.2307 41 1 2.4469 -10.7053 1.5836 42 1 3.9633 -11.6497 3.5072 43 1 5.1617 -7.6804 2.8222 44 1 3.6825 -6.2611 2.1820 45 1 1.9457 -6.1881 1.6538 46 1 1.6546 -2.1286 -0.0107 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567772_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:50:14 Heat of formation + Delta-G solvation = 8.502428 kcal Electronic energy + Delta-G solvation = -29107.350677 eV Core-core repulsion = 24965.776885 eV Total energy + Delta-G solvation = -4141.573792 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.06845 -41.71233 -40.60688 -39.73083 -37.85988 -37.49321 -35.84715 -33.98974 -33.49298 -31.95534 -30.33175 -28.85400 -27.98001 -26.86856 -26.80351 -25.11714 -23.91371 -22.47236 -22.08168 -21.82921 -21.42993 -20.16874 -19.57230 -18.93924 -18.22614 -18.07239 -17.28256 -16.86833 -16.78138 -16.39947 -16.17742 -16.07444 -15.91925 -15.55512 -15.16660 -15.07756 -14.80063 -14.72501 -14.46652 -14.39643 -14.26705 -14.16717 -13.89734 -13.57490 -13.37169 -13.25008 -13.11861 -12.90318 -12.77748 -12.35018 -12.21477 -12.10665 -11.77450 -11.62604 -11.58733 -11.07696 -10.93417 -10.47025 -10.45362 -10.22380 -9.95985 -9.64017 -9.44532 -5.05696 -0.39039 0.08001 1.12357 1.20579 1.53303 1.64062 1.84381 1.87772 2.07577 2.22331 2.58166 3.11590 3.29808 3.37113 3.37654 3.57583 3.60407 3.65588 3.70595 3.76460 3.85183 4.00153 4.03800 4.14673 4.17182 4.31898 4.33499 4.44716 4.47953 4.61456 4.62978 4.67196 4.72007 4.74990 4.75949 4.80896 4.84041 4.95322 4.98715 5.04542 5.09378 5.20435 5.21762 5.33131 5.34588 5.48501 5.60194 5.84891 6.31540 6.45184 6.68936 6.71182 7.13186 7.16227 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.122 4.122 3 C 0.152 3.848 4 O -0.497 6.497 5 C -0.160 4.160 6 C -0.052 4.052 7 O -0.549 6.549 8 Si 0.743 3.257 9 C -0.057 4.057 10 C -0.150 4.150 11 C 0.558 3.442 12 O -0.576 6.576 13 N -0.708 5.708 14 C 0.130 3.870 15 C -0.102 4.102 16 H 0.130 0.870 17 C -0.136 4.136 18 C 0.102 3.898 19 H 0.147 0.853 20 N -0.444 5.444 21 C -0.048 4.048 22 C -0.067 4.067 23 N -0.544 5.544 24 C 0.174 3.826 25 C -0.137 4.137 26 C -0.054 4.054 27 H 0.084 0.916 28 H 0.087 0.913 29 H 0.066 0.934 30 H 0.409 0.591 31 H 0.112 0.888 32 H 0.392 0.608 33 H -0.289 1.289 34 H -0.289 1.289 35 H 0.141 0.859 36 H 0.416 0.584 37 H 0.064 0.936 38 H 0.064 0.936 39 H 0.093 0.907 40 H 0.083 0.917 41 H 0.203 0.797 42 H 0.173 0.827 43 H 0.217 0.783 44 H 0.086 0.914 45 H 0.098 0.902 46 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.542 -1.932 -4.431 9.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.122 4.122 3 C 0.107 3.893 4 O -0.310 6.310 5 C -0.161 4.161 6 C -0.163 4.163 7 O -0.356 6.356 8 Si 0.649 3.351 9 C -0.076 4.076 10 C -0.153 4.153 11 C 0.346 3.654 12 O -0.456 6.456 13 N -0.361 5.361 14 C 0.006 3.994 15 C -0.121 4.121 16 H 0.148 0.852 17 C -0.174 4.174 18 C 0.000 4.000 19 H 0.165 0.835 20 N -0.126 5.126 21 C -0.181 4.181 22 C -0.214 4.214 23 N -0.263 5.263 24 C -0.108 4.108 25 C -0.175 4.175 26 C -0.072 4.072 27 H 0.103 0.897 28 H 0.106 0.894 29 H 0.085 0.915 30 H 0.269 0.731 31 H 0.130 0.870 32 H 0.241 0.759 33 H -0.216 1.216 34 H -0.216 1.216 35 H 0.158 0.842 36 H 0.254 0.746 37 H 0.082 0.918 38 H 0.083 0.917 39 H 0.111 0.889 40 H 0.102 0.898 41 H 0.220 0.780 42 H 0.190 0.810 43 H 0.234 0.766 44 H 0.105 0.895 45 H 0.117 0.883 46 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -6.785 -1.352 -4.209 8.098 hybrid contribution -1.058 0.309 -1.183 1.617 sum -7.843 -1.043 -5.392 9.575 Atomic orbital electron populations 1.20765 0.88328 1.04143 1.03612 1.20455 0.98311 0.91791 1.01679 1.18506 0.88796 0.85935 0.96109 1.84739 1.75527 1.35841 1.34918 1.20630 0.94272 0.95707 1.05474 1.24824 1.09076 0.93044 0.89367 1.86508 1.84829 1.47664 1.16601 0.93782 0.76203 0.80818 0.84312 1.21006 1.00015 0.90726 0.95816 1.19833 0.94346 0.92734 1.08410 1.18325 0.86764 0.84547 0.75798 1.90803 1.15161 1.88130 1.51539 1.45741 1.11198 1.04802 1.74362 1.21374 0.94424 0.81329 1.02222 1.22550 0.99036 0.92309 0.98177 0.85163 1.23425 0.98868 0.95041 1.00099 1.23440 0.99089 0.88499 0.88965 0.83542 1.45766 1.26931 1.11223 1.28693 1.23214 1.05251 0.86096 1.03551 1.22666 0.97813 1.00277 1.00653 1.70263 1.26907 1.01552 1.27592 1.25158 0.93474 1.00447 0.91767 1.23584 1.04329 0.92331 0.97260 1.21382 0.91668 0.98996 0.95162 0.89699 0.89428 0.91454 0.73062 0.87034 0.75857 1.21585 1.21610 0.84220 0.74561 0.91811 0.91740 0.88853 0.89809 0.78024 0.80968 0.76631 0.89523 0.88306 0.81640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.88 9.78 71.24 0.70 1.57 16 2 C -0.12 0.49 5.89 -19.81 -0.12 0.37 16 3 C 0.15 -0.06 6.66 22.63 0.15 0.09 16 4 O -0.50 0.41 11.84 -90.33 -1.07 -0.66 16 5 C -0.16 -0.11 5.27 -19.81 -0.10 -0.21 16 6 C -0.05 -0.06 2.37 71.24 0.17 0.11 16 7 O -0.55 -1.53 12.88 -148.98 -1.92 -3.45 16 8 Si 0.74 1.15 29.91 68.60 2.05 3.20 16 9 C -0.06 -0.07 8.20 22.50 0.18 0.11 16 10 C -0.15 0.12 5.88 -20.08 -0.12 0.00 16 11 C 0.56 0.71 7.76 86.72 0.67 1.38 16 12 O -0.58 -5.70 16.34 -3.97 -0.06 -5.77 16 13 N -0.71 4.79 5.51 -466.21 -2.57 2.23 16 14 C 0.13 -0.91 5.51 86.38 0.48 -0.43 16 15 C -0.10 1.33 3.76 -10.27 -0.04 1.29 16 16 H 0.13 -2.24 8.14 -2.39 -0.02 -2.26 16 17 C -0.14 1.41 7.31 31.12 0.23 1.64 16 18 C 0.10 -1.01 4.65 45.58 0.21 -0.80 16 19 H 0.15 -2.05 8.14 -2.39 -0.02 -2.07 16 20 N -0.44 0.92 2.95 -503.47 -1.48 -0.56 16 21 C -0.05 0.01 11.58 83.09 0.96 0.97 16 22 C -0.07 -0.40 11.87 83.52 0.99 0.59 16 23 N -0.54 -5.51 11.25 -200.31 -2.25 -7.77 16 24 C 0.17 0.50 11.36 180.26 2.05 2.55 16 25 C -0.14 1.62 7.20 31.18 0.22 1.85 16 26 C -0.05 0.33 9.18 22.50 0.21 0.53 16 27 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 28 H 0.09 -0.95 8.09 -2.39 -0.02 -0.97 16 29 H 0.07 -0.33 7.52 -2.38 -0.02 -0.35 16 30 H 0.41 -3.78 9.06 -74.06 -0.67 -4.45 16 31 H 0.11 0.06 7.82 -2.39 -0.02 0.05 16 32 H 0.39 -1.76 8.70 -74.06 -0.64 -2.40 16 33 H -0.29 -2.05 7.11 99.48 0.71 -1.34 16 34 H -0.29 -2.28 7.11 99.48 0.71 -1.58 16 35 H 0.14 0.21 4.70 -2.91 -0.01 0.19 16 36 H 0.42 -5.63 6.49 -92.71 -0.60 -6.23 16 37 H 0.06 -0.27 7.84 -2.39 -0.02 -0.28 16 38 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 39 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 40 H 0.08 -0.60 7.85 -2.39 -0.02 -0.62 16 41 H 0.20 -1.48 8.06 -2.91 -0.02 -1.50 16 42 H 0.17 0.50 8.06 -2.92 -0.02 0.48 16 43 H 0.22 -0.54 7.45 -2.91 -0.02 -0.56 16 44 H 0.09 -0.79 6.69 -2.39 -0.02 -0.81 16 45 H 0.10 -1.39 8.14 -2.39 -0.02 -1.41 16 46 H 0.17 -2.30 6.39 -2.91 -0.02 -2.32 16 Total: 0.00 -30.52 382.70 -1.29 -31.81 By element: Atomic # 1 Polarization: -29.82 SS G_CDS: -0.83 Total: -30.65 kcal Atomic # 6 Polarization: 4.78 SS G_CDS: 6.84 Total: 11.63 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -6.30 Total: -6.10 kcal Atomic # 8 Polarization: -6.82 SS G_CDS: -3.05 Total: -9.88 kcal Atomic # 14 Polarization: 1.15 SS G_CDS: 2.05 Total: 3.20 kcal Total: -30.52 -1.29 -31.81 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.310 kcal (2) G-P(sol) polarization free energy of solvation -30.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.808 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.502 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds