Wall clock time and date at job start Sun Mar 7 2021 07:50:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37784 * 119.85010 * 2 1 4 4 C 1.39710 * 119.90690 * 180.20964 * 3 2 1 5 5 C 1.47533 * 120.19261 * 179.78713 * 4 3 2 6 6 O 1.21593 * 120.00075 * 179.71802 * 5 4 3 7 7 N 1.34777 * 119.99975 * 359.71935 * 5 4 3 8 8 C 1.46498 * 119.99828 * 180.27938 * 7 5 4 9 9 C 1.52996 * 109.47059 * 179.72339 * 8 7 5 10 10 H 1.08997 * 112.85267 * 45.32803 * 9 8 7 11 11 C 1.53781 * 113.61494 * 176.52844 * 9 8 7 12 12 C 1.53781 * 87.08219 * 139.98040 * 11 9 8 13 13 H 1.08998 * 113.61657 * 89.11652 * 12 11 9 14 14 N 1.46499 * 113.61597 * 219.93301 * 12 11 9 15 15 C 1.36882 * 126.40202 * 239.71198 * 14 12 11 16 16 C 1.34667 * 106.81636 * 179.84026 * 15 14 12 17 17 N 1.34120 * 108.02491 * 0.42497 * 16 15 14 18 18 C 1.30500 * 109.25583 * 359.72848 * 17 16 15 19 19 C 1.53784 * 113.61355 * 274.13660 * 9 8 7 20 20 C 1.40142 * 119.61425 * 359.50625 * 4 3 2 21 21 O 1.35656 * 120.14920 * 180.28045 * 20 4 3 22 22 C 1.38706 * 119.69963 * 0.25565 * 20 4 3 23 23 C 1.50699 * 119.95625 * 180.02562 * 22 20 4 24 24 O 1.42901 * 109.47575 * 75.00009 * 23 22 20 25 25 Si 1.86301 * 109.47052 * 195.00099 * 23 22 20 26 26 C 1.38054 * 120.08510 * 359.97438 * 22 20 4 27 27 H 1.08994 * 109.47756 * 270.28389 * 1 2 3 28 28 H 1.09005 * 109.46568 * 30.28729 * 1 2 3 29 29 H 1.09003 * 109.47264 * 150.28053 * 1 2 3 30 30 H 1.07998 * 120.04871 * 359.97438 * 3 2 1 31 31 H 0.97001 * 119.99727 * 359.97438 * 7 5 4 32 32 H 1.09004 * 109.46963 * 299.72135 * 8 7 5 33 33 H 1.08994 * 109.47567 * 59.72287 * 8 7 5 34 34 H 1.09001 * 113.60987 * 254.52402 * 11 9 8 35 35 H 1.09000 * 113.61716 * 25.34727 * 11 9 8 36 36 H 1.07997 * 126.58849 * 359.97438 * 15 14 12 37 37 H 1.08001 * 125.98552 * 180.18644 * 16 15 14 38 38 H 1.08001 * 125.65024 * 180.02562 * 18 17 16 39 39 H 1.09004 * 113.61160 * 334.56145 * 19 9 8 40 40 H 1.08999 * 113.62074 * 105.47017 * 19 9 8 41 41 H 0.96703 * 114.00294 * 89.99599 * 21 20 4 42 42 H 1.09002 * 109.47234 * 315.00416 * 23 22 20 43 43 H 0.96698 * 114.00412 * 180.02562 * 24 23 22 44 44 H 1.48501 * 110.00030 * 299.99588 * 25 23 22 45 45 H 1.48490 * 110.00199 * 61.31986 * 25 23 22 46 46 H 1.08005 * 119.80278 * 179.97438 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1964 -0.0044 5 6 4.3306 2.4724 -0.0092 6 8 5.5465 2.4695 -0.0079 7 7 3.6594 3.6411 -0.0150 8 6 4.3950 4.9080 -0.0259 9 6 3.4035 6.0732 -0.0376 10 1 2.5906 5.9446 0.6770 11 6 4.0754 7.4546 0.0356 12 6 3.0312 7.9296 -0.9885 13 1 2.1157 8.3090 -0.5347 14 7 3.5762 8.8298 -2.0078 15 6 3.1745 10.1147 -2.2553 16 6 3.9373 10.5735 -3.2659 17 7 4.7753 9.5923 -3.6319 18 6 4.5647 8.5448 -2.8826 19 6 2.9283 6.4636 -1.4472 20 6 4.2837 -0.0212 0.0016 21 8 5.6402 -0.0325 0.0032 22 6 3.5770 -1.2147 0.0066 23 6 4.3171 -2.5274 0.0138 24 8 4.8535 -2.7649 1.3168 25 14 3.1447 -3.9038 -0.4355 26 6 2.1965 -1.2017 0.0061 27 1 -0.3634 0.0051 1.0276 28 1 -0.3633 0.8875 -0.5183 29 1 -0.3634 -0.8925 -0.5095 30 1 1.6512 2.1294 -0.0004 31 1 2.6894 3.6434 -0.0164 32 1 5.0208 4.9725 0.8642 33 1 5.0226 4.9562 -0.9157 34 1 3.9814 7.9346 1.0097 35 1 5.0971 7.4639 -0.3441 36 1 2.3970 10.6571 -1.7380 37 1 3.8811 11.5577 -3.7071 38 1 5.0937 7.6057 -2.9507 39 1 3.6354 6.2018 -2.2344 40 1 1.9097 6.1448 -1.6686 41 1 6.0326 -0.0318 0.8870 42 1 5.1294 -2.4905 -0.7122 43 1 5.3444 -3.5944 1.3950 44 1 2.0327 -3.9647 0.5468 45 1 2.6046 -3.6854 -1.8014 46 1 1.6509 -2.1337 0.0096 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:50:37 Heat of formation + Delta-G solvation = 14.725302 kcal Electronic energy + Delta-G solvation = -29301.502733 eV Core-core repulsion = 25160.198785 eV Total energy + Delta-G solvation = -4141.303948 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.10088 -41.76073 -40.56494 -39.60785 -38.06210 -37.60371 -35.72953 -33.67705 -33.27509 -32.84185 -30.32425 -29.05886 -27.72775 -27.18481 -26.81250 -25.41282 -24.09692 -22.51578 -22.01658 -21.81376 -21.42380 -20.37414 -19.56049 -18.82222 -18.46562 -18.06832 -17.66776 -17.11836 -16.83503 -16.52516 -16.15709 -16.04610 -15.94833 -15.31088 -15.20931 -15.14997 -14.96730 -14.71876 -14.68447 -14.43351 -14.38387 -14.30085 -13.91222 -13.81733 -13.54752 -13.30324 -13.24582 -13.07919 -12.71512 -12.52240 -12.41483 -12.04679 -12.00107 -11.91071 -11.69780 -10.84920 -10.82807 -10.48766 -10.36961 -10.29258 -10.10423 -9.59098 -9.41057 -5.06888 -0.40829 -0.01917 1.10834 1.17731 1.54078 1.70835 1.74936 1.84975 1.99030 2.32527 2.50232 2.96893 3.06432 3.14773 3.19602 3.31179 3.33838 3.48902 3.50954 3.71548 3.75363 3.82825 3.93349 3.96152 3.98047 4.00378 4.18967 4.23742 4.32474 4.35840 4.39314 4.47427 4.48815 4.50982 4.57188 4.62838 4.66218 4.66992 4.81557 4.84409 4.87547 4.94643 5.10467 5.22015 5.27142 5.37129 5.48759 5.85868 6.25709 6.34898 6.53488 6.72722 7.15368 7.20796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.560 3.440 6 O -0.515 6.515 7 N -0.729 5.729 8 C 0.133 3.867 9 C -0.121 4.121 10 H 0.106 0.894 11 C -0.135 4.135 12 C 0.108 3.892 13 H 0.125 0.875 14 N -0.450 5.450 15 C -0.058 4.058 16 C -0.030 4.030 17 N -0.493 5.493 18 C 0.182 3.818 19 C -0.141 4.141 20 C 0.193 3.807 21 O -0.472 6.472 22 C -0.106 4.106 23 C -0.068 4.068 24 O -0.547 6.547 25 Si 0.687 3.313 26 C -0.081 4.081 27 H 0.076 0.924 28 H 0.072 0.928 29 H 0.069 0.931 30 H 0.132 0.868 31 H 0.399 0.601 32 H 0.075 0.925 33 H 0.073 0.927 34 H 0.086 0.914 35 H 0.097 0.903 36 H 0.173 0.827 37 H 0.170 0.830 38 H 0.200 0.800 39 H 0.096 0.904 40 H 0.084 0.916 41 H 0.400 0.600 42 H 0.081 0.919 43 H 0.384 0.616 44 H -0.249 1.249 45 H -0.253 1.253 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.710 -3.481 3.905 7.744 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.167 4.167 5 C 0.347 3.653 6 O -0.391 6.391 7 N -0.383 5.383 8 C 0.009 3.991 9 C -0.140 4.140 10 H 0.124 0.876 11 C -0.173 4.173 12 C 0.005 3.995 13 H 0.143 0.857 14 N -0.132 5.132 15 C -0.190 4.190 16 C -0.178 4.178 17 N -0.211 5.211 18 C -0.100 4.100 19 C -0.179 4.179 20 C 0.146 3.854 21 O -0.283 6.283 22 C -0.107 4.107 23 C -0.179 4.179 24 O -0.354 6.354 25 Si 0.588 3.412 26 C -0.099 4.099 27 H 0.095 0.905 28 H 0.091 0.909 29 H 0.088 0.912 30 H 0.150 0.850 31 H 0.234 0.766 32 H 0.093 0.907 33 H 0.092 0.908 34 H 0.104 0.896 35 H 0.115 0.885 36 H 0.191 0.809 37 H 0.187 0.813 38 H 0.217 0.783 39 H 0.115 0.885 40 H 0.102 0.898 41 H 0.260 0.740 42 H 0.099 0.901 43 H 0.232 0.768 44 H -0.174 1.174 45 H -0.178 1.178 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -5.434 -3.121 2.662 6.809 hybrid contribution -0.958 0.588 1.137 1.599 sum -6.393 -2.533 3.799 7.856 Atomic orbital electron populations 1.20833 0.89962 1.03461 1.03044 1.19764 0.96813 0.92187 1.00992 1.21095 0.92143 0.98146 0.97222 1.20350 0.93886 0.93436 1.09052 1.17981 0.87276 0.83237 0.76775 1.90849 1.12933 1.87251 1.48021 1.45863 1.10296 1.05519 1.76578 1.21322 0.93809 0.80805 1.03131 1.22641 0.99246 0.94185 0.97944 0.87599 1.23431 0.99370 0.94574 0.99956 1.23080 0.98514 0.89154 0.88778 0.85750 1.45576 1.28616 1.11740 1.27304 1.22782 1.05658 0.86429 1.04139 1.22371 0.96838 0.99834 0.98715 1.70341 1.24790 1.00190 1.25777 1.24867 0.93640 1.00595 0.90938 1.23594 1.03638 0.93180 0.97454 1.18166 0.84057 0.89572 0.93638 1.84665 1.14030 1.95850 1.33774 1.19667 0.93239 0.93876 1.03893 1.24594 1.04084 1.00135 0.89046 1.86438 1.74619 1.45631 1.28685 0.95065 0.80237 0.85938 0.79973 1.21017 0.92988 0.98165 0.97724 0.90499 0.90859 0.91187 0.85004 0.76585 0.90677 0.90847 0.89550 0.88454 0.80942 0.81317 0.78309 0.88538 0.89756 0.74045 0.90129 0.76758 1.17437 1.17772 0.85302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.27 10.00 36.01 0.36 0.63 16 2 C -0.10 0.00 5.87 -104.67 -0.61 -0.62 16 3 C -0.07 0.03 9.18 -39.20 -0.36 -0.33 16 4 C -0.16 -0.34 5.89 -104.84 -0.62 -0.95 16 5 C 0.56 1.46 7.76 -12.47 -0.10 1.36 16 6 O -0.51 -3.22 15.16 -16.59 -0.25 -3.47 16 7 N -0.73 0.89 5.51 -61.35 -0.34 0.55 16 8 C 0.13 -0.26 5.50 -4.04 -0.02 -0.28 16 9 C -0.12 0.55 3.75 -89.81 -0.34 0.21 16 10 H 0.11 -0.61 8.14 -51.93 -0.42 -1.03 16 11 C -0.13 0.51 7.32 -25.92 -0.19 0.32 16 12 C 0.11 -0.35 4.64 -67.02 -0.31 -0.67 16 13 H 0.12 -0.58 8.14 -51.93 -0.42 -1.00 16 14 N -0.45 0.03 2.95 -110.49 -0.33 -0.30 16 15 C -0.06 -0.04 11.58 -16.56 -0.19 -0.23 16 16 C -0.03 -0.09 11.87 -17.82 -0.21 -0.30 16 17 N -0.49 -2.40 11.25 -14.67 -0.16 -2.56 16 18 C 0.18 0.33 11.38 -90.37 -1.03 -0.70 16 19 C -0.14 0.57 7.20 -25.82 -0.19 0.38 16 20 C 0.19 0.62 6.69 -38.69 -0.26 0.36 16 21 O -0.47 -1.76 10.91 -40.55 -0.44 -2.20 16 22 C -0.11 -0.25 5.30 -104.52 -0.55 -0.80 16 23 C -0.07 -0.02 2.37 36.01 0.09 0.07 16 24 O -0.55 0.12 12.86 -35.23 -0.45 -0.33 16 25 Si 0.69 -0.93 30.19 -169.99 -5.13 -6.06 16 26 C -0.08 -0.12 8.30 -39.54 -0.33 -0.44 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 28 H 0.07 -0.27 8.08 -51.93 -0.42 -0.69 16 29 H 0.07 -0.17 8.08 -51.93 -0.42 -0.59 16 30 H 0.13 -0.50 6.40 -52.49 -0.34 -0.83 16 31 H 0.40 -1.55 6.50 -40.82 -0.27 -1.82 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 -0.06 7.87 -51.93 -0.41 -0.47 16 34 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 35 H 0.10 -0.27 7.87 -51.93 -0.41 -0.68 16 36 H 0.17 -0.39 8.06 -52.49 -0.42 -0.81 16 37 H 0.17 0.17 8.06 -52.49 -0.42 -0.25 16 38 H 0.20 -0.17 7.45 -52.49 -0.39 -0.56 16 39 H 0.10 -0.30 6.72 -51.93 -0.35 -0.65 16 40 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 41 H 0.40 0.42 9.06 45.56 0.41 0.84 16 42 H 0.08 -0.01 7.83 -51.93 -0.41 -0.41 16 43 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 44 H -0.25 -0.24 6.74 56.52 0.38 0.15 16 45 H -0.25 -0.33 7.11 56.52 0.40 0.08 16 46 H 0.13 0.09 4.87 -52.48 -0.26 -0.16 16 LS Contribution 381.73 15.07 5.75 5.75 Total: 0.00 -12.09 381.73 -11.67 -23.75 By element: Atomic # 1 Polarization: -7.70 SS G_CDS: -5.45 Total: -13.15 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: -4.86 Total: -1.98 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -0.83 Total: -2.30 kcal Atomic # 8 Polarization: -4.86 SS G_CDS: -1.15 Total: -6.01 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.13 Total: -6.06 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -12.09 -11.67 -23.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.478 kcal (2) G-P(sol) polarization free energy of solvation -12.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.391 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.753 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds