Wall clock time and date at job start Sun Mar 7 2021 07:50:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42898 * 109.46900 * 75.00138 * 6 5 4 8 8 Si 1.86299 * 109.47352 * 195.00366 * 6 5 4 9 9 C 1.37629 * 120.06996 * 180.02562 * 5 4 2 10 10 C 1.39773 * 119.92914 * 359.97387 * 9 5 4 11 11 C 1.47522 * 120.06904 * 180.02562 * 10 9 5 12 12 O 1.21600 * 120.00119 * 0.02562 * 11 10 9 13 13 N 1.34779 * 120.00210 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00114 * 179.97438 * 13 11 10 15 15 C 1.52994 * 109.47183 * 180.02562 * 14 13 11 16 16 H 1.08997 * 112.84984 * 45.33358 * 15 14 13 17 17 C 1.53782 * 113.61419 * 176.53326 * 15 14 13 18 18 C 1.53782 * 87.08264 * 139.98092 * 17 15 14 19 19 H 1.09007 * 113.61395 * 89.11321 * 18 17 15 20 20 N 1.46498 * 113.61921 * 219.93609 * 18 17 15 21 21 C 1.36880 * 126.39625 * 239.72020 * 20 18 17 22 22 C 1.34678 * 106.81665 * 179.83801 * 21 20 18 23 23 N 1.34124 * 108.01702 * 0.41703 * 22 21 20 24 24 C 1.30505 * 109.26153 * 359.73302 * 23 22 21 25 25 C 1.53782 * 113.61342 * 274.13947 * 15 14 13 26 26 C 1.39819 * 119.86693 * 359.97438 * 10 9 5 27 27 C 1.37590 * 119.92402 * 359.75090 * 26 10 9 28 28 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 29 29 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 30 30 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 31 31 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 32 32 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 33 33 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 34 34 H 1.09006 * 109.47281 * 315.00631 * 6 5 4 35 35 H 0.96693 * 114.00703 * 300.00214 * 7 6 5 36 36 H 1.48500 * 109.99905 * 59.99850 * 8 6 5 37 37 H 1.48501 * 110.00085 * 181.31865 * 8 6 5 38 38 H 1.08002 * 120.03811 * 179.97438 * 9 5 4 39 39 H 0.96996 * 119.99978 * 0.02562 * 13 11 10 40 40 H 1.08998 * 109.47126 * 300.00934 * 14 13 11 41 41 H 1.09005 * 109.46638 * 60.00284 * 14 13 11 42 42 H 1.09005 * 113.61440 * 254.53024 * 17 15 14 43 43 H 1.09001 * 113.61611 * 25.43430 * 17 15 14 44 44 H 1.08002 * 126.59469 * 359.96739 * 21 20 18 45 45 H 1.08000 * 125.99006 * 180.11561 * 22 21 20 46 46 H 1.07999 * 125.65409 * 179.97438 * 24 23 22 47 47 H 1.08997 * 113.61960 * 334.56946 * 25 15 14 48 48 H 1.09003 * 113.61094 * 105.47603 * 25 15 14 49 49 H 1.07995 * 120.03704 * 179.97438 * 26 10 9 50 50 H 1.08002 * 119.96190 * 180.24921 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 1.9822 -2.8746 1.1552 8 14 4.5471 -3.4388 0.5301 9 6 3.2744 -2.5525 -1.9156 10 6 2.9607 -2.1696 -3.2228 11 6 3.4893 -2.9388 -4.3652 12 8 4.1983 -3.9073 -4.1703 13 7 3.1856 -2.5688 -5.6252 14 6 3.7110 -3.3323 -6.7597 15 6 3.2204 -2.7063 -8.0667 16 1 3.3135 -1.6204 -8.0770 17 6 3.7863 -3.3851 -9.3253 18 6 2.3893 -3.2201 -9.9467 19 1 2.2539 -2.2744 -10.4716 20 7 1.9580 -4.3760 -10.7366 21 6 1.6308 -4.3750 -12.0657 22 6 1.2967 -5.6399 -12.3857 23 7 1.4079 -6.3907 -11.2799 24 6 1.8036 -5.6404 -10.2881 25 6 1.8367 -3.2103 -8.5097 26 6 2.1440 -1.0568 -3.4454 27 6 1.6475 -0.3451 -2.3776 28 1 -0.3634 -1.0252 0.0708 29 1 -0.3633 0.4513 -0.9233 30 1 -0.3633 0.5740 0.8525 31 1 1.5899 1.9163 0.8525 32 1 3.0829 1.3431 0.0709 33 1 1.7045 1.8723 -0.9233 34 1 3.3911 -1.3635 1.1380 35 1 1.1988 -2.3099 1.2031 36 1 5.7339 -2.7957 -0.0890 37 1 4.8698 -3.8770 1.9118 38 1 3.9046 -3.4119 -1.7405 39 1 2.6198 -1.7965 -5.7807 40 1 4.8006 -3.3154 -6.7356 41 1 3.3622 -4.3631 -6.6966 42 1 4.5587 -2.8016 -9.8262 43 1 4.0744 -4.4246 -9.1686 44 1 1.6408 -3.5240 -12.7306 45 1 0.9883 -5.9875 -13.3606 46 1 1.9781 -5.9751 -9.2762 47 1 1.5908 -4.2018 -8.1297 48 1 1.0376 -2.4857 -8.3533 49 1 1.9003 -0.7583 -4.4543 50 1 1.0134 0.5121 -2.5488 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:50:41 Heat of formation + Delta-G solvation = 70.000451 kcal Electronic energy + Delta-G solvation = -31117.435071 eV Core-core repulsion = 26920.709077 eV Total energy + Delta-G solvation = -4196.725995 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -43.10728 -41.79192 -40.77112 -39.90227 -37.73458 -37.30148 -35.88022 -33.58654 -32.82375 -31.54313 -30.32176 -29.05908 -28.82089 -27.19921 -26.96336 -26.11559 -24.57542 -23.28281 -22.92707 -22.51166 -21.92851 -21.20234 -20.38890 -19.30501 -18.53588 -18.01592 -17.75522 -17.46308 -17.11046 -16.60621 -16.44478 -16.22124 -16.07662 -16.02645 -15.45163 -15.23562 -15.20306 -15.14131 -14.82660 -14.62134 -14.53099 -14.43893 -14.09480 -13.96072 -13.91399 -13.70470 -13.59548 -13.33793 -13.16554 -13.08798 -12.90663 -12.76672 -12.43874 -12.06430 -11.93718 -11.92054 -11.33752 -11.17035 -10.94463 -10.85320 -10.49384 -10.28358 -10.15440 -9.89009 -9.79130 -9.41603 -4.76347 -0.45584 0.07914 1.10230 1.46909 1.63991 1.73952 1.76211 1.95399 2.07616 2.32019 2.55707 2.59941 2.95654 3.05292 3.29583 3.33000 3.42854 3.54391 3.62234 3.71984 3.82196 3.84052 3.92400 3.94251 3.97262 4.02132 4.09616 4.12058 4.22253 4.28788 4.31245 4.31436 4.36018 4.37628 4.49272 4.53366 4.56443 4.60288 4.65455 4.68079 4.70908 4.72851 4.80976 4.92141 4.94187 5.04684 5.13913 5.22486 5.36196 5.44945 5.53775 5.85253 6.05807 6.25180 6.30275 6.65639 7.07747 7.20289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.518 5.518 3 C 0.026 3.974 4 C 0.125 3.875 5 C -0.098 4.098 6 C -0.062 4.062 7 O -0.533 6.533 8 Si 0.730 3.270 9 C -0.043 4.043 10 C -0.133 4.133 11 C 0.559 3.441 12 O -0.527 6.527 13 N -0.727 5.727 14 C 0.131 3.869 15 C -0.121 4.121 16 H 0.106 0.894 17 C -0.135 4.135 18 C 0.108 3.892 19 H 0.124 0.876 20 N -0.450 5.450 21 C -0.058 4.058 22 C -0.030 4.030 23 N -0.493 5.493 24 C 0.182 3.818 25 C -0.140 4.140 26 C -0.072 4.072 27 C -0.154 4.154 28 H 0.075 0.925 29 H 0.036 0.964 30 H 0.079 0.921 31 H 0.079 0.921 32 H 0.072 0.928 33 H 0.035 0.965 34 H 0.080 0.920 35 H 0.365 0.635 36 H -0.251 1.251 37 H -0.252 1.252 38 H 0.147 0.853 39 H 0.400 0.600 40 H 0.076 0.924 41 H 0.075 0.925 42 H 0.086 0.914 43 H 0.097 0.903 44 H 0.173 0.827 45 H 0.169 0.831 46 H 0.201 0.799 47 H 0.097 0.903 48 H 0.084 0.916 49 H 0.128 0.872 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.294 8.118 -1.556 8.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.239 5.239 3 C -0.120 4.120 4 C 0.030 3.970 5 C -0.100 4.100 6 C -0.171 4.171 7 O -0.338 6.338 8 Si 0.629 3.371 9 C -0.061 4.061 10 C -0.136 4.136 11 C 0.347 3.653 12 O -0.404 6.404 13 N -0.380 5.380 14 C 0.008 3.992 15 C -0.140 4.140 16 H 0.124 0.876 17 C -0.173 4.173 18 C 0.004 3.996 19 H 0.142 0.858 20 N -0.132 5.132 21 C -0.190 4.190 22 C -0.177 4.177 23 N -0.211 5.211 24 C -0.100 4.100 25 C -0.178 4.178 26 C -0.091 4.091 27 C -0.174 4.174 28 H 0.094 0.906 29 H 0.054 0.946 30 H 0.098 0.902 31 H 0.097 0.903 32 H 0.090 0.910 33 H 0.054 0.946 34 H 0.098 0.902 35 H 0.213 0.787 36 H -0.175 1.175 37 H -0.177 1.177 38 H 0.164 0.836 39 H 0.235 0.765 40 H 0.094 0.906 41 H 0.093 0.907 42 H 0.104 0.896 43 H 0.116 0.884 44 H 0.190 0.810 45 H 0.187 0.813 46 H 0.217 0.783 47 H 0.115 0.885 48 H 0.102 0.898 49 H 0.146 0.854 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.523 5.817 -0.552 5.866 hybrid contribution -1.234 3.503 -0.695 3.779 sum -1.757 9.320 -1.247 9.566 Atomic orbital electron populations 1.22556 0.84953 1.03240 1.01632 1.59463 1.09071 1.14808 1.40528 1.22494 1.01218 0.86814 1.01496 1.18848 0.95492 0.93614 0.89000 1.20265 0.98300 0.94808 0.96582 1.25279 0.97900 1.04448 0.89482 1.86731 1.22166 1.42728 1.82192 0.92889 0.73713 0.86781 0.83757 1.21045 0.96709 0.97885 0.90509 1.19874 1.02161 0.97956 0.93651 1.18140 0.80356 0.84090 0.82738 1.90836 1.37085 1.27232 1.85257 1.45855 1.53375 1.33216 1.05511 1.21355 0.99545 0.95485 0.82843 1.22640 0.96388 1.01137 0.93871 0.87630 1.23436 0.96068 1.02906 0.94930 1.23081 0.96394 0.88692 0.91396 0.85790 1.45573 1.49492 1.09187 1.08996 1.22783 1.09628 1.01152 0.85462 1.22375 1.06799 0.90161 0.98413 1.70343 1.18446 1.33041 0.99267 1.24872 1.04432 0.80152 1.00569 1.23594 0.97416 1.03516 0.93320 1.21131 0.95259 0.93682 0.99077 1.21579 1.01830 1.01152 0.92813 0.90644 0.94588 0.90198 0.90261 0.90963 0.94639 0.90232 0.78675 1.17506 1.17673 0.83611 0.76464 0.90566 0.90658 0.89563 0.88415 0.80961 0.81328 0.78266 0.88479 0.89778 0.85423 0.85285 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.20 60.07 0.55 0.49 16 2 N -0.52 0.68 3.67 -186.86 -0.69 0.00 16 3 C 0.03 -0.06 9.38 60.06 0.56 0.51 16 4 C 0.12 -0.04 4.66 -83.86 -0.39 -0.44 16 5 C -0.10 -0.09 5.28 -104.49 -0.55 -0.64 16 6 C -0.06 -0.08 2.29 36.00 0.08 0.00 16 7 O -0.53 -1.04 12.65 -35.23 -0.45 -1.48 16 8 Si 0.73 1.06 30.17 -169.99 -5.13 -4.07 16 9 C -0.04 -0.05 8.19 -39.23 -0.32 -0.37 16 10 C -0.13 -0.03 5.88 -104.95 -0.62 -0.65 16 11 C 0.56 0.60 7.76 -12.47 -0.10 0.50 16 12 O -0.53 -2.52 16.34 5.28 0.09 -2.44 16 13 N -0.73 1.77 5.51 -61.35 -0.34 1.43 16 14 C 0.13 -0.38 5.50 -4.04 -0.02 -0.40 16 15 C -0.12 0.64 3.75 -89.81 -0.34 0.30 16 16 H 0.11 -0.68 8.14 -51.93 -0.42 -1.10 16 17 C -0.13 0.58 7.32 -25.92 -0.19 0.39 16 18 C 0.11 -0.41 4.64 -67.02 -0.31 -0.72 16 19 H 0.12 -0.63 8.14 -51.93 -0.42 -1.06 16 20 N -0.45 0.24 2.95 -110.49 -0.33 -0.08 16 21 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 22 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 23 N -0.49 -2.19 11.25 -14.66 -0.16 -2.35 16 24 C 0.18 0.23 11.38 -90.37 -1.03 -0.80 16 25 C -0.14 0.67 7.20 -25.82 -0.19 0.48 16 26 C -0.07 0.15 9.53 -39.23 -0.37 -0.23 16 27 C -0.15 0.26 8.53 -39.45 -0.34 -0.08 16 28 H 0.07 -0.21 7.84 -51.93 -0.41 -0.61 16 29 H 0.04 -0.11 7.08 -51.93 -0.37 -0.48 16 30 H 0.08 -0.28 8.12 -51.93 -0.42 -0.70 16 31 H 0.08 -0.24 8.12 -51.93 -0.42 -0.66 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.03 -0.10 7.33 -51.93 -0.38 -0.48 16 34 H 0.08 0.10 7.78 -51.93 -0.40 -0.30 16 35 H 0.37 -0.02 8.06 45.56 0.37 0.34 16 36 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 37 H -0.25 -1.00 7.11 56.52 0.40 -0.59 16 38 H 0.15 0.18 4.70 -52.49 -0.25 -0.07 16 39 H 0.40 -2.03 6.49 -40.82 -0.26 -2.30 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.08 -0.15 7.88 -51.93 -0.41 -0.56 16 42 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 43 H 0.10 -0.33 7.86 -51.93 -0.41 -0.74 16 44 H 0.17 -0.44 8.06 -52.49 -0.42 -0.86 16 45 H 0.17 0.12 8.06 -52.49 -0.42 -0.31 16 46 H 0.20 -0.30 7.45 -52.49 -0.39 -0.69 16 47 H 0.10 -0.38 6.72 -51.93 -0.35 -0.73 16 48 H 0.08 -0.44 8.14 -51.93 -0.42 -0.87 16 49 H 0.13 -0.65 6.39 -52.49 -0.34 -0.99 16 50 H 0.13 -0.41 6.99 -52.49 -0.37 -0.78 16 LS Contribution 404.45 15.07 6.09 6.09 Total: 0.00 -9.55 404.45 -12.26 -21.81 By element: Atomic # 1 Polarization: -9.38 SS G_CDS: -7.39 Total: -16.77 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -3.97 Total: -2.14 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -1.51 Total: -1.01 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -0.36 Total: -3.92 kcal Atomic # 14 Polarization: 1.06 SS G_CDS: -5.13 Total: -4.07 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -9.55 -12.26 -21.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.809 kcal (2) G-P(sol) polarization free energy of solvation -9.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.808 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds