Wall clock time and date at job start Sun Mar 7 2021 07:51:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47267 * 2 1 4 4 C 1.50706 * 109.46938 * 240.00482 * 2 1 3 5 5 C 1.38710 * 120.02413 * 284.71930 * 4 2 1 6 6 O 1.35903 * 120.05656 * 0.02562 * 5 4 2 7 7 C 1.42904 * 116.99921 * 179.97438 * 6 5 4 8 8 C 1.50700 * 109.46873 * 179.97438 * 7 6 5 9 9 O 1.21277 * 119.99992 * 0.02562 * 8 7 6 10 10 N 1.34775 * 119.99802 * 179.97438 * 8 7 6 11 11 C 1.46499 * 120.00034 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47377 * 180.02562 * 11 10 8 13 13 H 1.09001 * 112.84635 * 43.80155 * 12 11 10 14 14 C 1.53775 * 113.61577 * 175.00246 * 12 11 10 15 15 C 1.53782 * 87.08018 * 139.98098 * 14 12 11 16 16 H 1.08999 * 113.61318 * 89.11813 * 15 14 12 17 17 N 1.46502 * 113.61388 * 220.01947 * 15 14 12 18 18 C 1.36884 * 126.39369 * 239.71620 * 17 15 14 19 19 C 1.34673 * 106.81392 * 179.84316 * 18 17 15 20 20 N 1.34130 * 108.01986 * 0.41425 * 19 18 17 21 21 C 1.30496 * 109.25580 * 359.74089 * 20 19 18 22 22 C 1.53782 * 87.08316 * 334.56642 * 15 14 12 23 23 C 1.38752 * 119.88933 * 179.78863 * 5 4 2 24 24 C 1.38132 * 119.94196 * 0.44696 * 23 5 4 25 25 C 1.38289 * 120.05325 * 359.80728 * 24 23 5 26 26 C 1.38161 * 120.02914 * 104.99890 * 4 2 1 27 27 H 0.96709 * 113.99981 * 299.99759 * 1 2 3 28 28 H 1.09000 * 109.47411 * 120.00370 * 2 1 3 29 29 H 1.48498 * 110.00336 * 178.68657 * 3 2 1 30 30 H 1.48504 * 109.99873 * 300.00510 * 3 2 1 31 31 H 1.08998 * 109.46853 * 299.99973 * 7 6 5 32 32 H 1.08996 * 109.46730 * 59.99882 * 7 6 5 33 33 H 0.97006 * 120.00138 * 0.02562 * 10 8 7 34 34 H 1.08998 * 109.47508 * 300.00168 * 11 10 8 35 35 H 1.08996 * 109.47158 * 60.00741 * 11 10 8 36 36 H 1.08995 * 113.61272 * 254.52677 * 14 12 11 37 37 H 1.09002 * 113.61674 * 25.34678 * 14 12 11 38 38 H 1.07993 * 126.59549 * 359.97438 * 18 17 15 39 39 H 1.07999 * 125.99091 * 180.18861 * 19 18 17 40 40 H 1.07996 * 125.64861 * 179.97438 * 21 20 19 41 41 H 1.09004 * 113.61435 * 270.88961 * 22 15 14 42 42 H 1.08998 * 113.61600 * 139.97737 * 22 15 14 43 43 H 1.08000 * 120.03396 * 180.23325 * 23 5 4 44 44 H 1.07997 * 119.97280 * 179.78273 * 24 23 5 45 45 H 1.08004 * 119.94193 * 180.02562 * 25 24 23 46 46 H 1.07999 * 119.97562 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.8749 -2.0943 -1.3047 6 8 1.3663 -2.8113 -0.2683 7 6 1.3390 -4.2326 -0.4143 8 6 0.7470 -4.8535 0.8248 9 8 0.3839 -4.1483 1.7422 10 7 0.6203 -6.1924 0.9128 11 6 0.0453 -6.7961 2.1175 12 6 0.0159 -8.3178 1.9612 13 1 0.9388 -8.7181 1.5414 14 6 -0.4587 -9.0576 3.2230 15 6 -1.2331 -9.9983 2.2848 16 1 -0.6524 -10.8589 1.9527 17 7 -2.5602 -10.3646 2.7856 18 6 -3.0057 -11.6306 3.0548 19 6 -4.2728 -11.5123 3.4953 20 7 -4.5953 -10.2103 3.4864 21 6 -3.5744 -9.5170 3.0623 22 6 -1.2548 -8.8417 1.2714 23 6 2.3341 -2.7452 -2.4408 24 6 2.8546 -2.0144 -3.4911 25 6 2.9145 -0.6350 -3.4125 26 6 2.4536 0.0160 -2.2834 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5139 0.8899 29 1 3.5346 1.7703 0.0320 30 1 1.5614 2.4679 -1.2085 31 1 0.7313 -4.4973 -1.2796 32 1 2.3542 -4.6028 -0.5562 33 1 0.9104 -6.7564 0.1789 34 1 0.6539 -6.5318 2.9823 35 1 -0.9697 -6.4256 2.2606 36 1 0.3459 -9.5505 3.7687 37 1 -1.1000 -8.4557 3.8668 38 1 -2.4476 -12.5478 2.9386 39 1 -4.9176 -12.3237 3.7988 40 1 -3.5454 -8.4432 2.9508 41 1 -2.1150 -8.1812 1.3810 42 1 -1.0928 -9.1603 0.2417 43 1 2.2878 -3.8224 -2.5025 44 1 3.2154 -2.5207 -4.3742 45 1 3.3214 -0.0654 -4.2350 46 1 2.5015 1.0933 -2.2245 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:51:13 Heat of formation + Delta-G solvation = 28.538931 kcal Electronic energy + Delta-G solvation = -28686.513140 eV Core-core repulsion = 24545.808196 eV Total energy + Delta-G solvation = -4140.704944 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.12408 -41.63577 -40.85261 -39.97365 -38.44128 -37.35714 -35.85637 -33.54431 -32.90471 -31.48867 -30.49230 -30.12083 -28.17880 -27.20534 -26.58717 -24.75124 -23.52711 -22.54758 -22.48763 -21.97305 -21.62331 -20.41800 -19.38799 -18.92974 -18.26933 -17.99081 -17.53263 -17.40577 -17.04424 -16.86869 -16.63469 -16.09581 -15.92278 -15.68703 -15.32122 -15.19938 -14.98821 -14.90734 -14.62899 -14.50596 -14.45201 -13.98660 -13.93400 -13.74790 -13.65905 -13.54663 -13.26317 -12.97011 -12.71150 -12.47365 -12.22525 -12.09677 -11.94232 -11.87066 -11.72400 -10.96046 -10.86445 -10.50677 -10.31613 -10.13114 -10.03497 -9.42707 -9.25663 -4.91764 0.15809 0.35760 1.08946 1.35702 1.36146 1.42386 1.68847 1.75802 2.00254 2.30967 2.45722 2.60920 2.93982 3.02547 3.27697 3.30275 3.42143 3.51067 3.68148 3.69123 3.76886 3.80882 3.83353 3.88405 3.91273 3.95936 4.07133 4.19753 4.20646 4.27758 4.29194 4.35688 4.44211 4.46894 4.55232 4.58547 4.60148 4.62129 4.79586 4.90382 4.91586 5.14706 5.19751 5.28422 5.34823 5.42280 5.61866 5.84259 6.13632 6.23993 6.29848 6.81256 7.00358 7.19196 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.102 4.102 5 C 0.153 3.847 6 O -0.277 6.277 7 C 0.039 3.961 8 C 0.516 3.484 9 O -0.508 6.508 10 N -0.728 5.728 11 C 0.133 3.867 12 C -0.120 4.120 13 H 0.107 0.893 14 C -0.135 4.135 15 C 0.108 3.892 16 H 0.125 0.875 17 N -0.450 5.450 18 C -0.058 4.058 19 C -0.030 4.030 20 N -0.493 5.493 21 C 0.182 3.818 22 C -0.141 4.141 23 C -0.211 4.211 24 C -0.072 4.072 25 C -0.150 4.150 26 C -0.084 4.084 27 H 0.380 0.620 28 H 0.074 0.926 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.402 0.598 34 H 0.076 0.924 35 H 0.075 0.925 36 H 0.086 0.914 37 H 0.097 0.903 38 H 0.173 0.827 39 H 0.170 0.830 40 H 0.201 0.799 41 H 0.097 0.903 42 H 0.084 0.916 43 H 0.132 0.868 44 H 0.131 0.869 45 H 0.130 0.870 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.386 -3.245 -2.243 6.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.584 3.416 4 C -0.103 4.103 5 C 0.107 3.893 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.301 3.699 9 O -0.381 6.381 10 N -0.383 5.383 11 C 0.010 3.990 12 C -0.140 4.140 13 H 0.125 0.875 14 C -0.174 4.174 15 C 0.005 3.995 16 H 0.143 0.857 17 N -0.133 5.133 18 C -0.190 4.190 19 C -0.177 4.177 20 N -0.211 5.211 21 C -0.101 4.101 22 C -0.179 4.179 23 C -0.229 4.229 24 C -0.090 4.090 25 C -0.169 4.169 26 C -0.101 4.101 27 H 0.227 0.773 28 H 0.092 0.908 29 H -0.180 1.180 30 H -0.175 1.175 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.237 0.763 34 H 0.094 0.906 35 H 0.093 0.907 36 H 0.105 0.895 37 H 0.116 0.884 38 H 0.191 0.809 39 H 0.187 0.813 40 H 0.217 0.783 41 H 0.115 0.885 42 H 0.103 0.897 43 H 0.149 0.851 44 H 0.149 0.851 45 H 0.148 0.852 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 4.975 -2.013 -2.146 5.779 hybrid contribution 1.123 -1.558 -1.064 2.196 sum 6.098 -3.571 -3.210 7.761 Atomic orbital electron populations 1.86498 1.17040 1.81934 1.49266 1.24517 0.85976 1.09643 0.97124 0.95206 0.80832 0.78468 0.87073 1.18686 1.04497 0.90365 0.96704 1.18740 0.93127 0.90678 0.86793 1.86212 1.77631 1.16752 1.38300 1.22470 1.02513 0.81460 0.97599 1.19997 0.79243 0.82390 0.88313 1.90797 1.47082 1.61034 1.39170 1.45771 1.65419 1.06288 1.20841 1.21350 0.99652 0.90564 0.87423 1.22642 0.98873 0.94441 0.98009 0.87501 1.23442 1.00296 0.97158 0.96498 1.23045 0.81838 0.98212 0.96434 0.85721 1.45576 1.12155 1.07037 1.48518 1.22786 0.98193 0.88402 1.09621 1.22378 0.94805 0.94339 1.06214 1.70344 1.27200 1.04258 1.19271 1.24864 0.83571 0.98107 1.03514 1.23574 0.98617 0.96472 0.99224 1.21285 1.06435 1.00457 0.94752 1.21017 0.96343 0.93918 0.97772 1.21043 1.02763 0.94722 0.98329 1.20888 0.97288 0.99277 0.92691 0.77252 0.90776 1.17951 1.17534 0.88778 0.88877 0.76328 0.90590 0.90721 0.89538 0.88436 0.80935 0.81312 0.78290 0.88507 0.89717 0.85065 0.85138 0.85248 0.85441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.68 12.86 -35.23 -0.45 -2.13 16 2 C -0.06 -0.16 2.37 36.01 0.09 -0.07 16 3 Si 0.68 0.23 30.20 -169.99 -5.13 -4.90 16 4 C -0.10 -0.39 5.30 -104.47 -0.55 -0.95 16 5 C 0.15 0.49 6.66 -39.22 -0.26 0.23 16 6 O -0.28 -0.98 9.00 -39.35 -0.35 -1.33 16 7 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 8 C 0.52 0.36 7.91 -10.99 -0.09 0.27 16 9 O -0.51 -2.91 16.50 -14.35 -0.24 -3.14 16 10 N -0.73 2.30 5.56 -60.30 -0.33 1.97 16 11 C 0.13 -0.42 5.51 -4.04 -0.02 -0.44 16 12 C -0.12 0.66 3.75 -89.81 -0.34 0.33 16 13 H 0.11 -0.72 8.14 -51.93 -0.42 -1.15 16 14 C -0.14 0.60 7.32 -25.92 -0.19 0.41 16 15 C 0.11 -0.42 4.64 -67.12 -0.31 -0.73 16 16 H 0.12 -0.65 8.14 -51.93 -0.42 -1.07 16 17 N -0.45 0.24 2.94 -110.59 -0.33 -0.08 16 18 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 19 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 20 N -0.49 -2.21 11.25 -14.67 -0.17 -2.37 16 21 C 0.18 0.24 11.38 -90.38 -1.03 -0.79 16 22 C -0.14 0.68 7.19 -25.92 -0.19 0.50 16 23 C -0.21 -0.16 9.04 -39.43 -0.36 -0.51 16 24 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 25 C -0.15 -0.21 10.04 -39.56 -0.40 -0.60 16 26 C -0.08 -0.25 8.66 -39.61 -0.34 -0.59 16 27 H 0.38 -0.66 8.74 45.56 0.40 -0.26 16 28 H 0.07 0.18 7.82 -51.93 -0.41 -0.22 16 29 H -0.25 -0.66 7.11 56.52 0.40 -0.25 16 30 H -0.25 -0.67 6.75 56.52 0.38 -0.28 16 31 H 0.09 -0.29 7.65 -51.93 -0.40 -0.69 16 32 H 0.09 -0.34 7.67 -51.93 -0.40 -0.74 16 33 H 0.40 -2.56 8.47 -40.82 -0.35 -2.90 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 35 H 0.07 -0.15 7.84 -51.93 -0.41 -0.55 16 36 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 37 H 0.10 -0.33 7.87 -51.93 -0.41 -0.74 16 38 H 0.17 -0.45 8.06 -52.49 -0.42 -0.87 16 39 H 0.17 0.12 8.06 -52.49 -0.42 -0.30 16 40 H 0.20 -0.29 7.43 -52.49 -0.39 -0.68 16 41 H 0.10 -0.38 6.67 -51.93 -0.35 -0.73 16 42 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 43 H 0.13 -0.31 6.30 -52.49 -0.33 -0.64 16 44 H 0.13 -0.28 8.06 -52.49 -0.42 -0.70 16 45 H 0.13 -0.09 8.06 -52.48 -0.42 -0.52 16 46 H 0.13 0.29 4.90 -52.49 -0.26 0.03 16 LS Contribution 384.95 15.07 5.80 5.80 Total: 0.00 -13.34 384.95 -12.12 -25.46 By element: Atomic # 1 Polarization: -9.23 SS G_CDS: -6.31 Total: -15.54 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -4.60 Total: -3.72 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.83 Total: -0.49 kcal Atomic # 8 Polarization: -5.56 SS G_CDS: -1.04 Total: -6.61 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.13 Total: -4.90 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -13.34 -12.12 -25.46 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.995 kcal (2) G-P(sol) polarization free energy of solvation -13.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.655 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds