Wall clock time and date at job start Sun Mar 7 2021 07:51:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.46881 * 2 1 4 4 C 1.50707 * 109.46739 * 119.99447 * 2 1 3 5 5 C 1.38263 * 119.94077 * 65.00745 * 4 2 1 6 6 C 1.38147 * 120.05494 * 179.97438 * 5 4 2 7 7 C 1.38734 * 119.94255 * 359.97438 * 6 5 4 8 8 O 1.35904 * 120.05688 * 180.02562 * 7 6 5 9 9 C 1.42896 * 117.00080 * 179.97438 * 8 7 6 10 10 C 1.50696 * 109.47216 * 180.02562 * 9 8 7 11 11 O 1.21284 * 120.00109 * 0.02562 * 10 9 8 12 12 N 1.34777 * 120.00137 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99873 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47035 * 179.97438 * 13 12 10 15 15 H 1.09003 * 112.84614 * 316.19506 * 14 13 12 16 16 C 1.53779 * 113.61394 * 87.49742 * 14 13 12 17 17 C 1.53789 * 87.08028 * 139.98290 * 16 14 13 18 18 H 1.08992 * 113.61440 * 89.11422 * 17 16 14 19 19 N 1.46488 * 113.69114 * 220.01203 * 17 16 14 20 20 C 1.36885 * 126.39612 * 217.53102 * 19 17 16 21 21 C 1.34671 * 106.81784 * 179.97438 * 20 19 17 22 22 N 1.34120 * 108.01991 * 0.02562 * 21 20 19 23 23 C 1.30501 * 109.26039 * 359.72779 * 22 21 20 24 24 C 1.53776 * 113.61417 * 184.99705 * 14 13 12 25 25 C 1.38738 * 119.88880 * 0.27595 * 7 6 5 26 26 C 1.38140 * 119.93868 * 359.46888 * 25 7 6 27 27 H 0.96694 * 113.99868 * 299.99759 * 1 2 3 28 28 H 1.08991 * 109.47268 * 239.99710 * 2 1 3 29 29 H 1.48499 * 110.00208 * 178.67515 * 3 2 1 30 30 H 1.48496 * 109.99914 * 299.99909 * 3 2 1 31 31 H 1.07993 * 119.97774 * 359.97193 * 5 4 2 32 32 H 1.07997 * 120.03072 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.47075 * 60.00332 * 9 8 7 34 34 H 1.08996 * 109.47405 * 300.00508 * 9 8 7 35 35 H 0.96999 * 120.00047 * 359.97438 * 12 10 9 36 36 H 1.09004 * 109.47073 * 299.99562 * 13 12 10 37 37 H 1.09000 * 109.47212 * 59.99645 * 13 12 10 38 38 H 1.08993 * 113.61704 * 254.52713 * 16 14 13 39 39 H 1.08991 * 113.61544 * 25.43887 * 16 14 13 40 40 H 1.08002 * 126.59138 * 359.97140 * 20 19 17 41 41 H 1.08004 * 125.98726 * 179.97438 * 21 20 19 42 42 H 1.08000 * 125.65084 * 180.29159 * 23 22 21 43 43 H 1.09001 * 113.61656 * 334.56827 * 24 14 13 44 44 H 1.09002 * 113.61540 * 105.38583 * 24 14 13 45 45 H 1.07997 * 120.02876 * 179.72405 * 25 7 6 46 46 H 1.08009 * 119.96980 * 180.23200 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.6840 -2.0604 1.3973 6 6 2.1438 -2.7140 2.5242 7 6 2.8546 -2.0147 3.4888 8 8 3.3084 -2.6554 4.5980 9 6 4.0332 -1.8725 5.5486 10 6 4.4539 -2.7459 6.7024 11 8 4.1621 -3.9231 6.7097 12 7 5.1543 -2.2189 7.7262 13 6 5.5636 -3.0682 8.8476 14 6 6.3396 -2.2299 9.8655 15 1 7.0631 -1.5610 9.3992 16 6 5.4428 -1.5406 10.9073 17 6 6.5181 -1.8914 11.9493 18 1 7.2900 -1.1290 12.0538 19 7 5.9707 -2.3268 13.2364 20 6 6.4769 -2.0359 14.4745 21 6 5.6708 -2.6306 15.3746 22 7 4.6992 -3.2676 14.7044 23 6 4.8693 -3.0855 13.4234 24 6 6.9211 -3.0536 11.0265 25 6 3.0969 -0.6589 3.3216 26 6 2.6395 -0.0112 2.1904 27 1 -0.3933 0.4416 0.7650 28 1 1.7924 -0.5138 -0.8899 29 1 3.5345 1.7704 0.0323 30 1 1.5614 2.4678 -1.2085 31 1 1.1310 -2.6045 0.6461 32 1 1.9501 -3.7685 2.6543 33 1 3.3977 -1.0665 5.9155 34 1 4.9177 -1.4496 5.0722 35 1 5.3879 -1.2775 7.7202 36 1 4.6796 -3.4921 9.3240 37 1 6.1998 -3.8734 8.4802 38 1 5.3269 -0.4693 10.7433 39 1 4.4933 -2.0500 11.0715 40 1 7.3542 -1.4435 14.6885 41 1 5.7868 -2.6006 16.4480 42 1 4.2355 -3.4783 12.6422 43 1 6.3757 -3.9767 11.2231 44 1 7.9984 -3.2050 10.9578 45 1 3.6462 -0.1113 4.0731 46 1 2.8311 1.0435 2.0579 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:51:17 Heat of formation + Delta-G solvation = 24.052659 kcal Electronic energy + Delta-G solvation = -27995.270828 eV Core-core repulsion = 23854.371345 eV Total energy + Delta-G solvation = -4140.899483 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -43.13669 -41.62455 -40.86831 -40.03548 -38.98338 -37.16446 -35.89330 -33.56328 -32.47553 -31.82358 -30.67391 -30.21470 -28.30676 -27.22446 -26.24888 -24.76095 -23.94260 -22.55867 -22.44506 -21.99829 -21.68029 -20.44908 -19.57197 -18.98962 -18.30266 -17.96910 -17.62729 -17.30722 -16.95800 -16.79493 -16.41974 -16.10338 -16.00010 -15.84941 -15.61249 -15.22071 -15.03327 -14.82748 -14.70435 -14.54035 -14.47265 -14.29535 -13.95364 -13.81261 -13.69788 -13.59664 -13.53008 -13.26581 -12.49661 -12.26978 -12.17581 -12.10462 -12.09033 -11.96153 -11.79793 -11.01314 -10.87559 -10.52017 -10.44786 -10.35333 -10.09840 -9.43906 -9.27495 -5.09243 0.23836 0.24634 1.07616 1.25940 1.31749 1.37650 1.58307 1.74394 1.93690 2.29800 2.42317 2.60888 2.92139 3.00561 3.25886 3.28489 3.38410 3.45690 3.61367 3.67323 3.67580 3.78338 3.79509 3.80816 3.82287 3.89273 3.94398 4.18020 4.21098 4.27454 4.33791 4.38503 4.45063 4.46412 4.53777 4.57192 4.60098 4.60434 4.78287 4.88548 4.89911 5.08836 5.12209 5.19261 5.33484 5.45917 5.62383 5.83076 6.10658 6.22739 6.26774 6.55767 6.96033 7.18001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.684 3.316 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.510 6.510 12 N -0.728 5.728 13 C 0.133 3.867 14 C -0.120 4.120 15 H 0.107 0.893 16 C -0.141 4.141 17 C 0.108 3.892 18 H 0.125 0.875 19 N -0.450 5.450 20 C -0.057 4.057 21 C -0.029 4.029 22 N -0.493 5.493 23 C 0.181 3.819 24 C -0.136 4.136 25 C -0.206 4.206 26 C -0.074 4.074 27 H 0.379 0.621 28 H 0.113 0.887 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.134 0.866 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.403 0.597 36 H 0.075 0.925 37 H 0.076 0.924 38 H 0.084 0.916 39 H 0.096 0.904 40 H 0.173 0.827 41 H 0.170 0.830 42 H 0.200 0.800 43 H 0.097 0.903 44 H 0.086 0.914 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.133 7.337 0.582 8.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.587 3.413 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.299 3.701 11 O -0.384 6.384 12 N -0.382 5.382 13 C 0.009 3.991 14 C -0.140 4.140 15 H 0.125 0.875 16 C -0.178 4.178 17 C 0.005 3.995 18 H 0.143 0.857 19 N -0.133 5.133 20 C -0.190 4.190 21 C -0.177 4.177 22 N -0.211 5.211 23 C -0.101 4.101 24 C -0.174 4.174 25 C -0.225 4.225 26 C -0.092 4.092 27 H 0.226 0.774 28 H 0.130 0.870 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.152 0.848 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.237 0.763 36 H 0.093 0.907 37 H 0.094 0.906 38 H 0.103 0.897 39 H 0.115 0.885 40 H 0.191 0.809 41 H 0.187 0.813 42 H 0.217 0.783 43 H 0.115 0.885 44 H 0.105 0.895 45 H 0.150 0.850 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.891 6.120 -0.094 7.253 hybrid contribution 1.123 0.615 -0.407 1.343 sum 5.013 6.735 -0.501 8.411 Atomic orbital electron populations 1.86510 1.17156 1.81701 1.49228 1.24983 0.85201 1.09880 0.97393 0.94881 0.80913 0.78184 0.87356 1.20258 1.02494 0.95197 0.97812 1.20868 0.96329 0.93469 0.96200 1.20544 1.01160 1.01108 0.93545 1.19074 0.94382 0.90996 0.86729 1.86176 1.68451 1.36596 1.28828 1.22459 0.97892 0.94018 0.89486 1.20042 0.78486 0.88491 0.83041 1.90807 1.53238 1.16202 1.78125 1.45772 1.57484 1.13683 1.21294 1.21362 0.99051 0.92972 0.85667 1.22640 0.98529 0.98612 0.94174 0.87469 1.23567 0.97981 1.02583 0.93715 1.23040 0.98041 0.98618 0.79835 0.85724 1.45571 1.22152 1.39157 1.06400 1.22789 1.03800 1.08350 0.84056 1.22376 0.94248 1.01170 0.99916 1.70340 1.25206 1.22555 1.02978 1.24865 0.91073 0.98540 0.95602 1.23447 1.02929 0.97789 0.93271 1.21164 1.06946 0.93625 1.00768 1.20764 0.96433 0.98997 0.93000 0.77398 0.87000 1.18342 1.17961 0.84777 0.84610 0.88610 0.88728 0.76267 0.90706 0.90576 0.89682 0.88517 0.80925 0.81311 0.78297 0.88459 0.89529 0.85047 0.85280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.03 12.83 -35.23 -0.45 -0.49 16 2 C -0.06 0.03 2.80 36.01 0.10 0.13 16 3 Si 0.68 -1.04 29.80 -169.99 -5.07 -6.11 16 4 C -0.16 0.03 5.35 -104.60 -0.56 -0.53 16 5 C -0.05 -0.03 9.68 -39.61 -0.38 -0.41 16 6 C -0.14 -0.19 9.99 -39.43 -0.39 -0.58 16 7 C 0.13 0.14 6.69 -39.21 -0.26 -0.12 16 8 O -0.29 -0.57 9.67 -39.35 -0.38 -0.95 16 9 C 0.04 -0.09 5.22 36.00 0.19 0.10 16 10 C 0.51 -0.04 7.91 -10.99 -0.09 -0.12 16 11 O -0.51 -2.71 16.50 -14.36 -0.24 -2.95 16 12 N -0.73 2.77 5.56 -60.29 -0.33 2.44 16 13 C 0.13 -0.47 5.51 -4.04 -0.02 -0.49 16 14 C -0.12 0.71 3.75 -89.81 -0.34 0.37 16 15 H 0.11 -0.77 8.14 -51.93 -0.42 -1.19 16 16 C -0.14 0.74 7.19 -25.92 -0.19 0.56 16 17 C 0.11 -0.45 4.64 -67.12 -0.31 -0.76 16 18 H 0.12 -0.69 8.14 -51.93 -0.42 -1.11 16 19 N -0.45 0.37 2.94 -110.59 -0.33 0.04 16 20 C -0.06 0.00 11.58 -16.56 -0.19 -0.20 16 21 C -0.03 -0.07 11.87 -17.82 -0.21 -0.28 16 22 N -0.49 -2.10 11.25 -14.66 -0.16 -2.26 16 23 C 0.18 0.19 11.39 -90.37 -1.03 -0.84 16 24 C -0.14 0.64 7.32 -25.92 -0.19 0.45 16 25 C -0.21 0.24 9.04 -39.43 -0.36 -0.12 16 26 C -0.07 0.09 8.66 -39.61 -0.34 -0.25 16 27 H 0.38 -1.44 8.70 45.56 0.40 -1.04 16 28 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 29 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 30 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 31 H 0.13 -0.02 8.06 -52.49 -0.42 -0.45 16 32 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 33 H 0.10 -0.47 7.65 -51.93 -0.40 -0.86 16 34 H 0.09 -0.44 7.67 -51.93 -0.40 -0.84 16 35 H 0.40 -2.87 8.47 -40.82 -0.35 -3.21 16 36 H 0.07 -0.18 7.85 -51.93 -0.41 -0.59 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.08 -0.50 8.14 -51.93 -0.42 -0.93 16 39 H 0.10 -0.43 6.67 -51.93 -0.35 -0.78 16 40 H 0.17 -0.48 8.06 -52.49 -0.42 -0.91 16 41 H 0.17 0.09 8.06 -52.48 -0.42 -0.34 16 42 H 0.20 -0.34 7.43 -52.49 -0.39 -0.73 16 43 H 0.10 -0.35 7.87 -51.93 -0.41 -0.76 16 44 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 45 H 0.13 -0.54 6.30 -52.49 -0.33 -0.87 16 46 H 0.13 -0.45 4.90 -52.48 -0.26 -0.70 16 LS Contribution 385.76 15.07 5.81 5.81 Total: 0.00 -12.87 385.76 -12.02 -24.89 By element: Atomic # 1 Polarization: -11.03 SS G_CDS: -6.30 Total: -17.33 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -4.58 Total: -3.10 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -0.83 Total: 0.22 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -1.07 Total: -4.38 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.07 Total: -6.11 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -12.87 -12.02 -24.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.945 kcal (2) G-P(sol) polarization free energy of solvation -12.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.077 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.053 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds