Wall clock time and date at job start Sun Mar 7 2021 07:51:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.46881 * 2 1 4 4 C 1.50707 * 109.46739 * 119.99447 * 2 1 3 5 5 C 1.38263 * 119.94077 * 65.00745 * 4 2 1 6 6 C 1.38147 * 120.05494 * 179.97438 * 5 4 2 7 7 C 1.38734 * 119.94255 * 359.97438 * 6 5 4 8 8 O 1.35904 * 120.05688 * 180.02562 * 7 6 5 9 9 C 1.42896 * 117.00080 * 179.97438 * 8 7 6 10 10 C 1.50696 * 109.47216 * 180.02562 * 9 8 7 11 11 O 1.21284 * 120.00109 * 0.02562 * 10 9 8 12 12 N 1.34777 * 120.00137 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99873 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47035 * 179.97438 * 13 12 10 15 15 H 1.09003 * 112.84614 * 316.19506 * 14 13 12 16 16 C 1.53779 * 113.61394 * 87.49742 * 14 13 12 17 17 C 1.53789 * 87.08028 * 139.98290 * 16 14 13 18 18 H 1.08992 * 113.61440 * 89.11422 * 17 16 14 19 19 N 1.46488 * 113.69114 * 220.01203 * 17 16 14 20 20 C 1.36885 * 126.39612 * 217.53102 * 19 17 16 21 21 C 1.34671 * 106.81784 * 179.97438 * 20 19 17 22 22 N 1.34120 * 108.01991 * 0.02562 * 21 20 19 23 23 C 1.30501 * 109.26039 * 359.72779 * 22 21 20 24 24 C 1.53776 * 113.61417 * 184.99705 * 14 13 12 25 25 C 1.38738 * 119.88880 * 0.27595 * 7 6 5 26 26 C 1.38140 * 119.93868 * 359.46888 * 25 7 6 27 27 H 0.96694 * 113.99868 * 299.99759 * 1 2 3 28 28 H 1.08991 * 109.47268 * 239.99710 * 2 1 3 29 29 H 1.48499 * 110.00208 * 178.67515 * 3 2 1 30 30 H 1.48496 * 109.99914 * 299.99909 * 3 2 1 31 31 H 1.07993 * 119.97774 * 359.97193 * 5 4 2 32 32 H 1.07997 * 120.03072 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.47075 * 60.00332 * 9 8 7 34 34 H 1.08996 * 109.47405 * 300.00508 * 9 8 7 35 35 H 0.96999 * 120.00047 * 359.97438 * 12 10 9 36 36 H 1.09004 * 109.47073 * 299.99562 * 13 12 10 37 37 H 1.09000 * 109.47212 * 59.99645 * 13 12 10 38 38 H 1.08993 * 113.61704 * 254.52713 * 16 14 13 39 39 H 1.08991 * 113.61544 * 25.43887 * 16 14 13 40 40 H 1.08002 * 126.59138 * 359.97140 * 20 19 17 41 41 H 1.08004 * 125.98726 * 179.97438 * 21 20 19 42 42 H 1.08000 * 125.65084 * 180.29159 * 23 22 21 43 43 H 1.09001 * 113.61656 * 334.56827 * 24 14 13 44 44 H 1.09002 * 113.61540 * 105.38583 * 24 14 13 45 45 H 1.07997 * 120.02876 * 179.72405 * 25 7 6 46 46 H 1.08009 * 119.96980 * 180.23200 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.6840 -2.0604 1.3973 6 6 2.1438 -2.7140 2.5242 7 6 2.8546 -2.0147 3.4888 8 8 3.3084 -2.6554 4.5980 9 6 4.0332 -1.8725 5.5486 10 6 4.4539 -2.7459 6.7024 11 8 4.1621 -3.9231 6.7097 12 7 5.1543 -2.2189 7.7262 13 6 5.5636 -3.0682 8.8476 14 6 6.3396 -2.2299 9.8655 15 1 7.0631 -1.5610 9.3992 16 6 5.4428 -1.5406 10.9073 17 6 6.5181 -1.8914 11.9493 18 1 7.2900 -1.1290 12.0538 19 7 5.9707 -2.3268 13.2364 20 6 6.4769 -2.0359 14.4745 21 6 5.6708 -2.6306 15.3746 22 7 4.6992 -3.2676 14.7044 23 6 4.8693 -3.0855 13.4234 24 6 6.9211 -3.0536 11.0265 25 6 3.0969 -0.6589 3.3216 26 6 2.6395 -0.0112 2.1904 27 1 -0.3933 0.4416 0.7650 28 1 1.7924 -0.5138 -0.8899 29 1 3.5345 1.7704 0.0323 30 1 1.5614 2.4678 -1.2085 31 1 1.1310 -2.6045 0.6461 32 1 1.9501 -3.7685 2.6543 33 1 3.3977 -1.0665 5.9155 34 1 4.9177 -1.4496 5.0722 35 1 5.3879 -1.2775 7.7202 36 1 4.6796 -3.4921 9.3240 37 1 6.1998 -3.8734 8.4802 38 1 5.3269 -0.4693 10.7433 39 1 4.4933 -2.0500 11.0715 40 1 7.3542 -1.4435 14.6885 41 1 5.7868 -2.6006 16.4480 42 1 4.2355 -3.4783 12.6422 43 1 6.3757 -3.9767 11.2231 44 1 7.9984 -3.2050 10.9578 45 1 3.6462 -0.1113 4.0731 46 1 2.8311 1.0435 2.0579 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567772_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:51:16 Heat of formation + Delta-G solvation = 22.087859 kcal Electronic energy + Delta-G solvation = -27995.356028 eV Core-core repulsion = 23854.371345 eV Total energy + Delta-G solvation = -4140.984684 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -43.08534 -41.55724 -40.74181 -39.84455 -38.93761 -37.11910 -35.81129 -33.50639 -32.40639 -31.75131 -30.58666 -30.17754 -28.09465 -26.83123 -26.18249 -24.59285 -23.86255 -22.47941 -22.39173 -21.89982 -21.59658 -20.19079 -19.47939 -18.81869 -18.23261 -17.86512 -17.48470 -17.14309 -16.78949 -16.63551 -16.33739 -16.04342 -15.86091 -15.78023 -15.52784 -15.13642 -14.96467 -14.77444 -14.60914 -14.44038 -14.39710 -14.32119 -13.75824 -13.59808 -13.57727 -13.45286 -13.33412 -13.09686 -12.25516 -12.12652 -12.07829 -12.03365 -11.81422 -11.72221 -11.61486 -11.00532 -10.94600 -10.47057 -10.39455 -10.20952 -10.04135 -9.45911 -9.23106 -4.98452 0.27700 0.30855 1.10742 1.34818 1.44693 1.48820 1.66159 1.89779 2.00329 2.20883 2.59953 2.65773 3.28417 3.35045 3.55687 3.58758 3.63999 3.69003 3.76346 3.83188 3.84710 3.95992 3.99875 4.05254 4.10769 4.12905 4.29712 4.31306 4.42839 4.45810 4.49789 4.60319 4.65256 4.67146 4.72680 4.72753 4.82030 4.94191 4.96809 4.97385 5.15799 5.19010 5.25389 5.31503 5.46904 5.50248 5.69748 5.83663 6.26746 6.29982 6.47446 6.80426 7.13394 7.14785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.075 4.075 3 Si 0.784 3.216 4 C -0.162 4.162 5 C -0.062 4.062 6 C -0.168 4.168 7 C 0.121 3.879 8 O -0.322 6.322 9 C 0.036 3.964 10 C 0.510 3.490 11 O -0.577 6.577 12 N -0.705 5.705 13 C 0.131 3.869 14 C -0.099 4.099 15 H 0.134 0.866 16 C -0.136 4.136 17 C 0.102 3.898 18 H 0.148 0.852 19 N -0.444 5.444 20 C -0.047 4.047 21 C -0.067 4.067 22 N -0.544 5.544 23 C 0.173 3.827 24 C -0.138 4.138 25 C -0.198 4.198 26 C -0.074 4.074 27 H 0.395 0.605 28 H 0.101 0.899 29 H -0.281 1.281 30 H -0.305 1.305 31 H 0.130 0.870 32 H 0.124 0.876 33 H 0.130 0.870 34 H 0.127 0.873 35 H 0.423 0.577 36 H 0.058 0.942 37 H 0.060 0.940 38 H 0.101 0.899 39 H 0.085 0.915 40 H 0.204 0.796 41 H 0.173 0.827 42 H 0.216 0.784 43 H 0.081 0.919 44 H 0.093 0.907 45 H 0.168 0.832 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.779 10.502 0.589 12.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.184 4.184 3 Si 0.690 3.310 4 C -0.163 4.163 5 C -0.080 4.080 6 C -0.187 4.187 7 C 0.076 3.924 8 O -0.235 6.235 9 C -0.042 4.042 10 C 0.296 3.704 11 O -0.456 6.456 12 N -0.360 5.360 13 C 0.007 3.993 14 C -0.118 4.118 15 H 0.152 0.848 16 C -0.174 4.174 17 C 0.000 4.000 18 H 0.166 0.834 19 N -0.126 5.126 20 C -0.181 4.181 21 C -0.214 4.214 22 N -0.263 5.263 23 C -0.110 4.110 24 C -0.177 4.177 25 C -0.217 4.217 26 C -0.091 4.091 27 H 0.245 0.755 28 H 0.118 0.882 29 H -0.208 1.208 30 H -0.233 1.233 31 H 0.148 0.852 32 H 0.142 0.858 33 H 0.147 0.853 34 H 0.144 0.856 35 H 0.262 0.738 36 H 0.077 0.923 37 H 0.079 0.921 38 H 0.120 0.880 39 H 0.103 0.897 40 H 0.221 0.779 41 H 0.191 0.809 42 H 0.232 0.768 43 H 0.099 0.901 44 H 0.112 0.888 45 H 0.186 0.814 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 5.552 9.323 -0.059 10.852 hybrid contribution 0.624 -0.383 -0.437 0.853 sum 6.177 8.941 -0.496 10.878 Atomic orbital electron populations 1.86470 1.17546 1.82249 1.50478 1.25214 0.85122 1.11164 0.96947 0.93794 0.77713 0.74722 0.84802 1.20363 1.02789 0.94850 0.98295 1.20903 0.96841 0.94197 0.96100 1.20614 1.02492 1.01000 0.94575 1.19208 0.94700 0.92007 0.86508 1.86132 1.69192 1.38520 1.29653 1.22777 0.99490 0.93654 0.88285 1.20586 0.77923 0.87901 0.83994 1.90781 1.56114 1.19065 1.79639 1.45622 1.55748 1.14617 1.20029 1.21336 0.98480 0.93332 0.86122 1.22546 0.98278 0.98018 0.92959 0.84801 1.23545 0.97249 1.03474 0.93152 1.23421 0.98953 0.99242 0.78363 0.83413 1.45770 1.21327 1.38124 1.07394 1.23229 1.03768 1.07219 0.83843 1.22670 0.95173 1.02711 1.00826 1.70256 1.26961 1.24380 1.04726 1.25139 0.91927 0.98756 0.95169 1.23439 1.03204 0.97258 0.93781 1.21523 1.06160 0.92614 1.01359 1.21073 0.95429 1.00176 0.92417 0.75523 0.88151 1.20807 1.23312 0.85164 0.85767 0.85273 0.85558 0.73829 0.92313 0.92139 0.88012 0.89672 0.77929 0.80934 0.76761 0.90089 0.88838 0.81427 0.82631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.15 12.83 -148.98 -1.91 -2.06 16 2 C -0.08 0.08 2.80 71.24 0.20 0.28 16 3 Si 0.78 -3.20 29.80 68.60 2.04 -1.15 16 4 C -0.16 0.09 5.35 -19.85 -0.11 -0.01 16 5 C -0.06 -0.16 9.68 22.25 0.22 0.06 16 6 C -0.17 -0.72 9.99 22.37 0.22 -0.50 16 7 C 0.12 0.25 6.69 22.51 0.15 0.40 16 8 O -0.32 -1.38 9.67 -73.43 -0.71 -2.09 16 9 C 0.04 -0.21 5.22 71.23 0.37 0.16 16 10 C 0.51 -0.14 7.91 87.66 0.69 0.56 16 11 O -0.58 -7.28 16.50 16.00 0.26 -7.02 16 12 N -0.71 6.31 5.56 -463.04 -2.57 3.73 16 13 C 0.13 -0.95 5.51 86.38 0.48 -0.47 16 14 C -0.10 1.36 3.75 -10.27 -0.04 1.32 16 15 H 0.13 -2.45 8.14 -2.39 -0.02 -2.47 16 16 C -0.14 1.70 7.19 31.12 0.22 1.92 16 17 C 0.10 -1.04 4.64 45.52 0.21 -0.83 16 18 H 0.15 -2.13 8.14 -2.39 -0.02 -2.15 16 19 N -0.44 0.95 2.94 -503.81 -1.48 -0.54 16 20 C -0.05 0.02 11.58 83.09 0.96 0.98 16 21 C -0.07 -0.39 11.87 83.53 0.99 0.60 16 22 N -0.54 -5.58 11.25 -200.31 -2.25 -7.83 16 23 C 0.17 0.53 11.39 180.26 2.05 2.58 16 24 C -0.14 1.43 7.32 31.12 0.23 1.66 16 25 C -0.20 0.90 9.04 22.37 0.20 1.10 16 26 C -0.07 0.33 8.66 22.25 0.19 0.52 16 27 H 0.39 -3.18 8.70 -74.06 -0.64 -3.83 16 28 H 0.10 0.08 7.96 -2.39 -0.02 0.06 16 29 H -0.28 0.05 7.11 99.48 0.71 0.76 16 30 H -0.30 -1.30 7.11 99.48 0.71 -0.60 16 31 H 0.13 0.26 8.06 -2.91 -0.02 0.24 16 32 H 0.12 0.64 8.06 -2.91 -0.02 0.62 16 33 H 0.13 -1.68 7.65 -2.39 -0.02 -1.70 16 34 H 0.13 -1.59 7.67 -2.39 -0.02 -1.61 16 35 H 0.42 -7.33 8.47 -92.71 -0.79 -8.12 16 36 H 0.06 -0.21 7.85 -2.38 -0.02 -0.23 16 37 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.10 -1.54 8.14 -2.39 -0.02 -1.56 16 39 H 0.08 -0.81 6.67 -2.39 -0.02 -0.82 16 40 H 0.20 -1.54 8.06 -2.91 -0.02 -1.56 16 41 H 0.17 0.49 8.06 -2.91 -0.02 0.47 16 42 H 0.22 -0.46 7.43 -2.91 -0.02 -0.48 16 43 H 0.08 -0.54 7.87 -2.39 -0.02 -0.55 16 44 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 45 H 0.17 -2.11 6.30 -2.91 -0.02 -2.12 16 46 H 0.16 -1.59 4.90 -2.91 -0.01 -1.61 16 Total: 0.00 -35.47 385.76 0.26 -35.21 By element: Atomic # 1 Polarization: -28.21 SS G_CDS: -0.37 Total: -28.58 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: 7.25 Total: 10.32 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -6.31 Total: -4.63 kcal Atomic # 8 Polarization: -8.81 SS G_CDS: -2.36 Total: -11.17 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.04 Total: -1.15 kcal Total: -35.47 0.26 -35.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.301 kcal (2) G-P(sol) polarization free energy of solvation -35.468 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.213 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.088 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds