Wall clock time and date at job start Sun Mar 7 2021 07:51:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50696 * 109.47278 * 239.99675 * 2 1 3 5 5 C 1.38268 * 119.94238 * 119.72540 * 4 2 1 6 6 C 1.38148 * 120.05255 * 179.72402 * 5 4 2 7 7 C 1.38731 * 119.94303 * 0.55323 * 6 5 4 8 8 O 1.35900 * 120.05280 * 179.74897 * 7 6 5 9 9 C 1.42897 * 117.00207 * 359.97334 * 8 7 6 10 10 C 1.53005 * 109.47223 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47105 * 179.97438 * 10 9 8 12 12 O 1.21278 * 119.99985 * 0.02562 * 11 10 9 13 13 N 1.34781 * 119.99787 * 179.97438 * 11 10 9 14 14 C 1.46491 * 119.99579 * 180.02562 * 13 11 10 15 15 C 1.53005 * 109.46897 * 180.02562 * 14 13 11 16 16 H 1.08996 * 112.85005 * 316.19858 * 15 14 13 17 17 C 1.53777 * 113.61230 * 87.50648 * 15 14 13 18 18 C 1.53782 * 87.08177 * 139.98062 * 17 15 14 19 19 H 1.09005 * 113.68808 * 89.12615 * 18 17 15 20 20 N 1.46495 * 113.61209 * 220.01452 * 18 17 15 21 21 C 1.36890 * 126.39594 * 217.20884 * 20 18 17 22 22 C 1.34671 * 106.81673 * 179.84818 * 21 20 18 23 23 N 1.34131 * 108.02015 * 0.41939 * 22 21 20 24 24 C 1.30502 * 109.25597 * 359.73736 * 23 22 21 25 25 C 1.53784 * 87.08114 * 334.56667 * 18 17 15 26 26 C 1.38728 * 119.89302 * 359.72113 * 7 6 5 27 27 C 1.38154 * 119.93919 * 0.02562 * 26 7 6 28 28 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 29 29 H 1.08997 * 109.46978 * 119.99554 * 2 1 3 30 30 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 31 31 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 32 32 H 1.07998 * 119.97204 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.02568 * 180.27470 * 6 5 4 34 34 H 1.08998 * 109.47221 * 300.00355 * 9 8 7 35 35 H 1.09003 * 109.47106 * 60.00320 * 9 8 7 36 36 H 1.08998 * 109.47207 * 300.00236 * 10 9 8 37 37 H 1.09003 * 109.46922 * 60.00080 * 10 9 8 38 38 H 0.96996 * 119.99855 * 0.02562 * 13 11 10 39 39 H 1.08998 * 109.47462 * 300.00303 * 14 13 11 40 40 H 1.09003 * 109.47191 * 60.00468 * 14 13 11 41 41 H 1.09000 * 113.61428 * 254.53107 * 17 15 14 42 42 H 1.08998 * 113.61815 * 25.43414 * 17 15 14 43 43 H 1.07991 * 126.59013 * 359.97438 * 21 20 18 44 44 H 1.07999 * 125.98949 * 180.12201 * 22 21 20 45 45 H 1.08002 * 125.64717 * 179.97438 * 24 23 22 46 46 H 1.08998 * 113.60951 * 270.88296 * 25 18 17 47 47 H 1.08994 * 113.68989 * 139.99081 * 25 18 17 48 48 H 1.07991 * 120.03247 * 180.02562 * 26 7 6 49 49 H 1.07997 * 119.96817 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1880 -0.6864 -3.2684 7 6 2.8536 -2.0146 -3.4891 8 8 3.3070 -2.6554 -4.5984 9 6 4.1235 -1.9003 -5.4957 10 6 4.5346 -2.7824 -6.6763 11 6 5.3951 -1.9858 -7.6229 12 8 5.6544 -0.8268 -7.3772 13 7 5.8773 -2.5617 -8.7420 14 6 6.7143 -1.7874 -9.6618 15 6 7.1253 -2.6695 -10.8425 16 1 7.4362 -3.6684 -10.5365 17 6 6.1100 -2.6651 -11.9975 18 6 7.3151 -2.6403 -12.9525 19 1 7.6781 -3.6312 -13.2254 20 7 7.1274 -1.7640 -14.1114 21 6 7.5622 -2.0008 -15.3876 22 6 7.1760 -0.9475 -16.1325 23 7 6.5313 -0.0866 -15.3311 24 6 6.4984 -0.5690 -14.1190 25 6 8.1084 -1.9872 -11.8083 26 6 2.0559 -2.6877 -2.5752 27 6 1.5963 -2.0340 -1.4482 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5138 0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5616 2.4679 -1.2086 32 1 2.9776 0.9996 -1.9728 33 1 3.8089 -0.1603 -3.9785 34 1 3.5616 -1.0413 -5.8627 35 1 5.0149 -1.5546 -4.9723 36 1 5.0963 -3.6415 -6.3097 37 1 3.6429 -3.1277 -7.1996 38 1 5.6702 -3.4887 -8.9383 39 1 6.1524 -0.9285 -10.0287 40 1 7.6058 -1.4418 -9.1384 41 1 5.5195 -3.5789 -12.0632 42 1 5.5007 -1.7623 -12.0398 43 1 8.1080 -2.8669 -15.7314 44 1 7.3581 -0.8164 -17.1890 45 1 6.0438 -0.0915 -13.2636 46 1 8.0454 -0.8990 -11.7990 47 1 9.1315 -2.3527 -11.7204 48 1 1.7945 -3.7218 -2.7445 49 1 0.9750 -2.5575 -0.7367 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:51:21 Heat of formation + Delta-G solvation = 16.094201 kcal Electronic energy + Delta-G solvation = -29626.236536 eV Core-core repulsion = 25329.454329 eV Total energy + Delta-G solvation = -4296.782207 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.13548 -41.42564 -40.97932 -40.06638 -39.04979 -37.22927 -35.91342 -33.73080 -33.30558 -32.06600 -31.55928 -30.35813 -29.16198 -27.22967 -26.53007 -25.60796 -24.51422 -23.41091 -22.55310 -22.04864 -21.97615 -21.49455 -20.42215 -19.53687 -18.73953 -18.38439 -17.89027 -17.59698 -17.31793 -17.13004 -16.83177 -16.65674 -16.28888 -16.09796 -15.70757 -15.49416 -15.31584 -15.01115 -14.81548 -14.72508 -14.67312 -14.46269 -14.33963 -14.00414 -13.94727 -13.80817 -13.63021 -13.60905 -13.32588 -12.98147 -12.84731 -12.47741 -12.35453 -12.10201 -11.95596 -11.92964 -11.86134 -11.73459 -11.09903 -10.87819 -10.51880 -10.32365 -10.30608 -10.01105 -9.43950 -9.15775 -4.96574 0.30151 0.34363 1.07816 1.30434 1.42190 1.57176 1.64775 1.75587 1.99114 2.29606 2.35654 2.66290 2.93263 3.02606 3.26710 3.30342 3.40160 3.44950 3.66004 3.72636 3.74858 3.77559 3.80698 3.84989 3.91310 3.95299 4.00242 4.18362 4.21682 4.25887 4.27701 4.34669 4.35341 4.42874 4.45549 4.51768 4.54260 4.58470 4.59749 4.61188 4.73355 4.78468 4.89587 4.95375 5.16095 5.20238 5.29142 5.33658 5.52298 5.71963 5.83083 6.19492 6.22720 6.34393 6.64008 6.97249 7.17800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.065 4.065 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.083 4.083 6 C -0.201 4.201 7 C 0.137 3.863 8 O -0.315 6.315 9 C 0.073 3.927 10 C -0.141 4.141 11 C 0.520 3.480 12 O -0.537 6.537 13 N -0.728 5.728 14 C 0.130 3.870 15 C -0.121 4.121 16 H 0.107 0.893 17 C -0.140 4.140 18 C 0.108 3.892 19 H 0.125 0.875 20 N -0.450 5.450 21 C -0.057 4.057 22 C -0.030 4.030 23 N -0.493 5.493 24 C 0.181 3.819 25 C -0.136 4.136 26 C -0.149 4.149 27 C -0.049 4.049 28 H 0.382 0.618 29 H 0.074 0.926 30 H -0.256 1.256 31 H -0.251 1.251 32 H 0.120 0.880 33 H 0.134 0.866 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.108 0.892 37 H 0.108 0.892 38 H 0.404 0.596 39 H 0.073 0.927 40 H 0.075 0.925 41 H 0.084 0.916 42 H 0.096 0.904 43 H 0.174 0.826 44 H 0.170 0.830 45 H 0.200 0.800 46 H 0.096 0.904 47 H 0.086 0.914 48 H 0.136 0.864 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.274 -5.439 3.273 6.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.100 4.100 6 C -0.219 4.219 7 C 0.092 3.908 8 O -0.229 6.229 9 C -0.003 4.003 10 C -0.181 4.181 11 C 0.306 3.694 12 O -0.413 6.413 13 N -0.381 5.381 14 C 0.007 3.993 15 C -0.140 4.140 16 H 0.125 0.875 17 C -0.178 4.178 18 C 0.005 3.995 19 H 0.143 0.857 20 N -0.133 5.133 21 C -0.190 4.190 22 C -0.177 4.177 23 N -0.211 5.211 24 C -0.101 4.101 25 C -0.175 4.175 26 C -0.167 4.167 27 C -0.068 4.068 28 H 0.229 0.771 29 H 0.092 0.908 30 H -0.181 1.181 31 H -0.176 1.176 32 H 0.137 0.863 33 H 0.152 0.848 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.126 0.874 37 H 0.126 0.874 38 H 0.238 0.762 39 H 0.091 0.909 40 H 0.093 0.907 41 H 0.103 0.897 42 H 0.114 0.886 43 H 0.191 0.809 44 H 0.187 0.813 45 H 0.217 0.783 46 H 0.115 0.885 47 H 0.105 0.895 48 H 0.154 0.846 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.703 -3.837 2.237 4.757 hybrid contribution 0.523 -1.652 -0.196 1.744 sum 2.227 -5.489 2.041 6.265 Atomic orbital electron populations 1.86492 1.17338 1.81764 1.49678 1.24592 0.85580 1.10068 0.97382 0.95438 0.80665 0.78270 0.87479 1.19258 1.00830 0.94844 0.96453 1.20663 0.97249 0.98552 0.93564 1.21205 1.05802 0.94520 1.00399 1.18947 0.94206 0.90884 0.86798 1.85969 1.65085 1.40334 1.31488 1.22428 0.94736 0.93897 0.89222 1.21463 1.01364 0.99872 0.95380 1.20304 0.80037 0.87454 0.81610 1.90769 1.58773 1.17250 1.74525 1.45917 1.52984 1.16085 1.23123 1.21349 0.94984 0.93926 0.89047 1.22641 0.97274 1.00644 0.93418 0.87498 1.23561 0.96220 1.04438 0.93611 1.23050 0.98847 0.94649 0.82982 0.85697 1.45578 1.42122 1.17186 1.08384 1.22791 1.08096 1.03719 0.84365 1.22377 1.02793 0.92348 1.00198 1.70345 1.19855 1.30000 1.00893 1.24854 1.01599 0.85604 0.98043 1.23448 0.99319 1.01744 0.92940 1.20511 1.00749 1.01113 0.94338 1.20817 0.96506 0.93360 0.96068 0.77080 0.90834 1.18059 1.17597 0.86279 0.84829 0.90903 0.90904 0.87378 0.87372 0.76155 0.90872 0.90707 0.89686 0.88568 0.80916 0.81301 0.78339 0.88510 0.89545 0.84616 0.84659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.34 12.74 -35.23 -0.45 -0.79 16 2 C -0.07 -0.03 2.81 36.00 0.10 0.07 16 3 Si 0.68 -0.23 29.78 -169.99 -5.06 -5.29 16 4 C -0.11 -0.34 5.42 -104.60 -0.57 -0.91 16 5 C -0.08 -0.29 8.66 -39.60 -0.34 -0.63 16 6 C -0.20 -0.63 9.04 -39.43 -0.36 -0.99 16 7 C 0.14 0.42 6.69 -39.22 -0.26 0.16 16 8 O -0.31 -0.67 10.14 -19.43 -0.20 -0.87 16 9 C 0.07 0.04 4.03 37.16 0.15 0.19 16 10 C -0.14 0.30 6.07 -27.88 -0.17 0.13 16 11 C 0.52 -0.19 7.83 -10.98 -0.09 -0.28 16 12 O -0.54 -2.14 15.98 5.56 0.09 -2.05 16 13 N -0.73 2.38 5.56 -60.30 -0.33 2.04 16 14 C 0.13 -0.41 5.51 -4.04 -0.02 -0.43 16 15 C -0.12 0.64 3.75 -89.81 -0.34 0.30 16 16 H 0.11 -0.69 8.14 -51.93 -0.42 -1.12 16 17 C -0.14 0.66 7.18 -25.92 -0.19 0.47 16 18 C 0.11 -0.40 4.64 -67.12 -0.31 -0.71 16 19 H 0.13 -0.63 8.14 -51.93 -0.42 -1.05 16 20 N -0.45 0.20 2.94 -110.59 -0.33 -0.13 16 21 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 22 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 23 N -0.49 -2.24 11.25 -14.66 -0.16 -2.41 16 24 C 0.18 0.26 11.37 -90.37 -1.03 -0.77 16 25 C -0.14 0.58 7.32 -25.92 -0.19 0.39 16 26 C -0.15 -0.36 9.99 -39.43 -0.39 -0.75 16 27 C -0.05 -0.12 9.60 -39.60 -0.38 -0.50 16 28 H 0.38 -1.71 8.74 45.56 0.40 -1.31 16 29 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 31 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 32 H 0.12 0.34 4.87 -52.49 -0.26 0.09 16 33 H 0.13 0.26 6.30 -52.48 -0.33 -0.07 16 34 H 0.07 0.08 7.62 -51.93 -0.40 -0.31 16 35 H 0.07 0.07 7.62 -51.93 -0.40 -0.33 16 36 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 37 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 38 H 0.40 -2.44 8.47 -40.82 -0.35 -2.78 16 39 H 0.07 -0.15 7.84 -51.93 -0.41 -0.55 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 42 H 0.10 -0.37 6.68 -51.93 -0.35 -0.72 16 43 H 0.17 -0.43 8.06 -52.49 -0.42 -0.85 16 44 H 0.17 0.13 8.06 -52.49 -0.42 -0.29 16 45 H 0.20 -0.27 7.44 -52.49 -0.39 -0.66 16 46 H 0.10 -0.31 7.86 -51.93 -0.41 -0.72 16 47 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 48 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.14 0.11 8.06 -52.49 -0.42 -0.32 16 LS Contribution 406.62 15.07 6.13 6.13 Total: 0.00 -12.07 406.62 -12.24 -24.31 By element: Atomic # 1 Polarization: -9.06 SS G_CDS: -7.14 Total: -16.20 kcal Atomic # 6 Polarization: 0.03 SS G_CDS: -4.79 Total: -4.76 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.83 Total: -0.49 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.56 Total: -3.70 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.06 Total: -5.29 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -12.07 -12.24 -24.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.405 kcal (2) G-P(sol) polarization free energy of solvation -12.069 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.311 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds