Wall clock time and date at job start Sun Mar 7 2021 07:52:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35982 * 116.99910 * 2 1 4 4 C 1.38678 * 120.00056 * 180.02562 * 3 2 1 5 5 C 1.38150 * 119.99988 * 179.74722 * 4 3 2 6 6 C 1.50700 * 120.00311 * 180.25394 * 5 4 3 7 7 O 1.42904 * 109.47225 * 105.25678 * 6 5 4 8 8 Si 1.86304 * 109.46907 * 345.25748 * 6 5 4 9 9 C 1.38683 * 119.99834 * 0.51118 * 5 4 3 10 10 O 1.35982 * 119.99914 * 179.74722 * 9 5 4 11 11 C 1.42897 * 117.00259 * 179.72661 * 10 9 5 12 12 C 1.50699 * 109.47544 * 179.97438 * 11 10 9 13 13 O 1.21281 * 119.99785 * 0.02562 * 12 11 10 14 14 N 1.34772 * 120.00326 * 179.97438 * 12 11 10 15 15 C 1.46494 * 120.00463 * 180.02562 * 14 12 11 16 16 C 1.52999 * 109.47391 * 180.02562 * 15 14 12 17 17 H 1.08993 * 112.90825 * 316.25137 * 16 15 14 18 18 C 1.53962 * 113.66529 * 87.55384 * 16 15 14 19 19 C 1.53782 * 87.11063 * 139.88900 * 18 16 15 20 20 H 1.08996 * 113.68722 * 89.19879 * 19 18 16 21 21 N 1.46499 * 113.61191 * 220.09091 * 19 18 16 22 22 C 1.36889 * 126.39411 * 217.50067 * 21 19 18 23 23 C 1.34666 * 106.81716 * 179.97438 * 22 21 19 24 24 N 1.34125 * 108.02053 * 0.02562 * 23 22 21 25 25 C 1.30498 * 109.25716 * 359.72246 * 24 23 22 26 26 C 1.53781 * 87.08260 * 334.63747 * 19 18 16 27 27 C 1.38710 * 119.99840 * 359.46808 * 9 5 4 28 28 C 1.38105 * 120.00391 * 0.27594 * 27 9 5 29 29 H 1.09005 * 109.46475 * 299.99615 * 1 2 3 30 30 H 1.08998 * 109.46955 * 59.99564 * 1 2 3 31 31 H 1.08994 * 109.46965 * 179.97438 * 1 2 3 32 32 H 1.07995 * 119.99923 * 0.02715 * 4 3 2 33 33 H 1.08995 * 109.47334 * 225.25564 * 6 5 4 34 34 H 0.96699 * 113.99819 * 300.00020 * 7 6 5 35 35 H 1.48498 * 110.00050 * 179.97438 * 8 6 5 36 36 H 1.48502 * 109.99962 * 301.31899 * 8 6 5 37 37 H 1.09000 * 109.47263 * 59.99733 * 11 10 9 38 38 H 1.08996 * 109.46754 * 299.99862 * 11 10 9 39 39 H 0.97000 * 119.99857 * 0.02562 * 14 12 11 40 40 H 1.09002 * 109.47287 * 60.00002 * 15 14 12 41 41 H 1.09004 * 109.47020 * 300.00283 * 15 14 12 42 42 H 1.08997 * 113.53543 * 25.33574 * 18 16 15 43 43 H 1.08998 * 113.73879 * 254.47172 * 18 16 15 44 44 H 1.07999 * 126.59177 * 359.95952 * 22 21 19 45 45 H 1.08001 * 125.98816 * 179.97438 * 23 22 21 46 46 H 1.08006 * 125.65345 * 180.29705 * 25 24 23 47 47 H 1.09002 * 113.61445 * 139.98212 * 26 19 18 48 48 H 1.09002 * 113.61408 * 270.79943 * 26 19 18 49 49 H 1.08003 * 119.99845 * 180.29706 * 27 9 5 50 50 H 1.08002 * 120.00450 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2842 -0.0005 5 6 4.0584 2.5152 -0.0058 6 6 5.5633 2.5941 -0.0122 7 8 6.0151 2.9703 -1.3147 8 14 6.2743 0.9313 0.4355 9 6 3.3031 3.6782 0.0001 10 8 3.9204 4.8898 0.0001 11 6 3.0805 6.0459 0.0004 12 6 3.9346 7.2875 0.0010 13 8 5.1437 7.1917 0.0007 14 7 3.3551 8.5042 0.0008 15 6 4.1853 9.7112 0.0008 16 6 3.2860 10.9489 0.0012 17 1 2.4498 10.8660 -0.6929 18 6 2.8744 11.4133 1.4102 19 6 3.0787 12.8533 0.9106 20 1 2.1862 13.2931 0.4655 21 7 3.7152 13.7313 1.8955 22 6 3.4254 15.0512 2.1143 23 6 4.2394 15.4704 3.1018 24 7 5.0057 14.4349 3.4754 25 6 4.6934 13.3885 2.7610 26 6 4.0595 12.2724 -0.1216 27 6 1.9179 3.6056 0.0002 28 6 1.2909 2.3751 0.0002 29 1 -0.3632 0.5138 0.8901 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0276 -0.0005 32 1 4.0195 0.3785 -0.0014 33 1 5.8913 3.3372 0.7147 34 1 5.7588 2.3529 -2.0134 35 1 7.7579 0.9957 0.4322 36 1 5.7865 0.5143 1.7747 37 1 2.4514 6.0378 0.8904 38 1 2.4512 6.0379 -0.8895 39 1 2.3881 8.5808 0.0006 40 1 4.8148 9.7192 -0.8891 41 1 4.8145 9.7193 0.8909 42 1 3.5774 11.1173 2.1887 43 1 1.8399 11.1817 1.6637 44 1 2.6861 15.6427 1.5946 45 1 4.2704 16.4660 3.5191 46 1 5.1442 12.4107 2.8463 47 1 3.9816 12.7340 -1.1060 48 1 5.0869 12.2127 0.2377 49 1 1.3296 4.5113 0.0000 50 1 0.2123 2.3185 0.0007 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567772_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:52:09 Heat of formation + Delta-G solvation = -11.090072 kcal Electronic energy + Delta-G solvation = -32824.233788 eV Core-core repulsion = 28207.590591 eV Total energy + Delta-G solvation = -4616.643198 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.10972 -41.78248 -40.97754 -40.08626 -39.57522 -38.19128 -36.90637 -35.83206 -33.52541 -32.80424 -31.25810 -30.42939 -30.02536 -28.21683 -27.75811 -26.85335 -26.62195 -24.62128 -23.51843 -22.50528 -22.42066 -21.92280 -21.63216 -20.21374 -19.59624 -18.88843 -18.71458 -18.14155 -17.63678 -17.49853 -17.23410 -16.96990 -16.66600 -16.56861 -16.14604 -16.06692 -15.88964 -15.70980 -15.38440 -15.15874 -15.13631 -14.85006 -14.60786 -14.46819 -14.39781 -14.28398 -14.07623 -13.62654 -13.51033 -13.46677 -13.37326 -13.13710 -12.99486 -12.49068 -12.34190 -12.15402 -12.09594 -11.86466 -11.77267 -11.64136 -11.41023 -11.01641 -10.96960 -10.49601 -10.41149 -10.23423 -10.10764 -9.48198 -8.78766 -5.05002 0.07490 0.36759 1.08332 1.26113 1.43035 1.49070 1.61189 1.87279 1.92675 2.18508 2.36238 2.56496 2.61178 3.25875 3.31760 3.49301 3.55431 3.60837 3.66514 3.73911 3.77568 3.80536 3.95414 3.97318 4.06763 4.09593 4.11928 4.14635 4.26566 4.26882 4.40304 4.42984 4.45878 4.47066 4.58034 4.62191 4.68464 4.69756 4.71055 4.79419 4.80893 4.90870 4.93948 4.98598 5.15865 5.16283 5.23047 5.29101 5.43728 5.44922 5.81506 6.18945 6.27225 6.41436 6.49183 6.80023 7.11778 7.12347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.088 3.912 4 C -0.116 4.116 5 C -0.125 4.125 6 C -0.066 4.066 7 O -0.552 6.552 8 Si 0.781 3.219 9 C 0.097 3.903 10 O -0.313 6.313 11 C 0.036 3.964 12 C 0.509 3.491 13 O -0.574 6.574 14 N -0.706 5.706 15 C 0.131 3.869 16 C -0.099 4.099 17 H 0.135 0.865 18 C -0.137 4.137 19 C 0.103 3.897 20 H 0.150 0.850 21 N -0.444 5.444 22 C -0.046 4.046 23 C -0.067 4.067 24 N -0.544 5.544 25 C 0.172 3.828 26 C -0.138 4.138 27 C -0.164 4.164 28 C -0.159 4.159 29 H 0.064 0.936 30 H 0.068 0.932 31 H 0.114 0.886 32 H 0.156 0.844 33 H 0.088 0.912 34 H 0.392 0.608 35 H -0.297 1.297 36 H -0.285 1.285 37 H 0.123 0.877 38 H 0.125 0.875 39 H 0.423 0.577 40 H 0.060 0.940 41 H 0.057 0.943 42 H 0.083 0.917 43 H 0.101 0.899 44 H 0.205 0.795 45 H 0.174 0.826 46 H 0.215 0.785 47 H 0.094 0.906 48 H 0.080 0.920 49 H 0.165 0.835 50 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.073 -1.633 -5.548 15.215 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.043 3.957 4 C -0.134 4.134 5 C -0.126 4.126 6 C -0.175 4.175 7 O -0.359 6.359 8 Si 0.686 3.314 9 C 0.052 3.948 10 O -0.226 6.226 11 C -0.042 4.042 12 C 0.295 3.705 13 O -0.453 6.453 14 N -0.361 5.361 15 C 0.008 3.992 16 C -0.118 4.118 17 H 0.153 0.847 18 C -0.175 4.175 19 C 0.001 3.999 20 H 0.167 0.833 21 N -0.126 5.126 22 C -0.180 4.180 23 C -0.214 4.214 24 N -0.263 5.263 25 C -0.111 4.111 26 C -0.176 4.176 27 C -0.183 4.183 28 C -0.177 4.177 29 H 0.083 0.917 30 H 0.087 0.913 31 H 0.132 0.868 32 H 0.173 0.827 33 H 0.106 0.894 34 H 0.241 0.759 35 H -0.225 1.225 36 H -0.211 1.211 37 H 0.140 0.860 38 H 0.142 0.858 39 H 0.261 0.739 40 H 0.078 0.922 41 H 0.075 0.925 42 H 0.102 0.898 43 H 0.119 0.881 44 H 0.222 0.778 45 H 0.191 0.809 46 H 0.231 0.769 47 H 0.113 0.887 48 H 0.098 0.902 49 H 0.183 0.817 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -11.674 -1.839 -4.156 12.527 hybrid contribution -0.993 1.060 -0.079 1.455 sum -12.667 -0.779 -4.235 13.379 Atomic orbital electron populations 1.23346 0.76458 1.05572 1.02331 1.86084 1.23314 1.26296 1.88997 1.18965 0.92026 0.85251 0.99490 1.20171 0.92347 0.96584 1.04302 1.19499 0.96201 0.90825 1.06085 1.25066 0.92082 1.11540 0.88839 1.86551 1.78424 1.54380 1.16572 0.94004 0.76445 0.77741 0.83182 1.18877 0.91619 0.84544 0.99770 1.86209 1.35314 1.12001 1.89099 1.22722 0.92662 0.82227 1.06624 1.20578 0.88274 0.85697 0.75914 1.90792 1.17017 1.87453 1.49995 1.45613 1.11587 1.04008 1.74884 1.21323 0.93391 0.82722 1.01776 1.22575 0.99328 0.91630 0.98247 0.84747 1.23576 1.04409 0.92349 0.97163 1.23413 0.97964 0.89614 0.88881 0.83287 1.45773 1.28755 1.09767 1.28328 1.23238 1.05660 0.85679 1.03414 1.22679 0.98429 0.99554 1.00713 1.70258 1.27471 1.00719 1.27832 1.25117 0.93612 1.00505 0.91851 1.23434 0.98737 0.95249 1.00215 1.21369 0.92021 1.00061 1.04812 1.21410 1.01554 0.90924 1.03858 0.91702 0.91344 0.86785 0.82738 0.89426 0.75913 1.22492 1.21128 0.85966 0.85774 0.73924 0.92157 0.92499 0.89820 0.88050 0.77848 0.80863 0.76904 0.88716 0.90158 0.81740 0.82209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.12 9.81 113.37 1.11 0.99 16 2 O -0.33 -0.18 10.50 -93.35 -0.98 -1.16 16 3 C 0.09 0.09 6.69 22.49 0.15 0.24 16 4 C -0.12 -0.23 8.59 22.35 0.19 -0.04 16 5 C -0.12 -0.60 5.27 -19.78 -0.10 -0.70 16 6 C -0.07 -0.45 2.37 71.24 0.17 -0.28 16 7 O -0.55 -4.34 12.88 -148.98 -1.92 -6.25 16 8 Si 0.78 2.22 29.91 68.60 2.05 4.27 16 9 C 0.10 0.39 6.66 22.49 0.15 0.54 16 10 O -0.31 -2.22 9.00 -74.31 -0.67 -2.88 16 11 C 0.04 -0.11 5.22 71.24 0.37 0.26 16 12 C 0.51 1.19 7.91 87.66 0.69 1.88 16 13 O -0.57 -8.89 16.50 16.00 0.26 -8.62 16 14 N -0.71 4.81 5.56 -463.07 -2.57 2.23 16 15 C 0.13 -0.71 5.51 86.38 0.48 -0.23 16 16 C -0.10 1.22 3.76 -10.20 -0.04 1.18 16 17 H 0.13 -2.29 8.14 -2.39 -0.02 -2.31 16 18 C -0.14 1.53 7.19 31.18 0.22 1.75 16 19 C 0.10 -0.95 4.65 45.52 0.21 -0.74 16 20 H 0.15 -2.04 8.14 -2.39 -0.02 -2.06 16 21 N -0.44 0.54 2.94 -503.80 -1.48 -0.94 16 22 C -0.05 -0.01 11.58 83.08 0.96 0.95 16 23 C -0.07 -0.44 11.87 83.52 0.99 0.55 16 24 N -0.54 -6.03 11.25 -200.31 -2.25 -8.29 16 25 C 0.17 0.71 11.38 180.26 2.05 2.76 16 26 C -0.14 1.27 7.32 31.12 0.23 1.50 16 27 C -0.16 0.43 9.03 22.35 0.20 0.64 16 28 C -0.16 0.46 9.03 22.35 0.20 0.66 16 29 H 0.06 -0.57 7.66 -2.38 -0.02 -0.59 16 30 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 31 H 0.11 -1.08 8.14 -2.39 -0.02 -1.10 16 32 H 0.16 -0.25 5.12 -2.91 -0.01 -0.26 16 33 H 0.09 1.04 7.82 -2.39 -0.02 1.03 16 34 H 0.39 -0.72 8.70 -74.06 -0.64 -1.36 16 35 H -0.30 -2.97 7.11 99.48 0.71 -2.26 16 36 H -0.28 -2.09 7.11 99.48 0.71 -1.38 16 37 H 0.12 -1.21 7.66 -2.39 -0.02 -1.23 16 38 H 0.12 -1.24 7.66 -2.39 -0.02 -1.26 16 39 H 0.42 -6.45 8.47 -92.71 -0.79 -7.24 16 40 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 41 H 0.06 -0.09 7.84 -2.38 -0.02 -0.10 16 42 H 0.08 -0.66 6.66 -2.39 -0.02 -0.68 16 43 H 0.10 -1.40 8.14 -2.39 -0.02 -1.42 16 44 H 0.20 -1.43 8.06 -2.91 -0.02 -1.46 16 45 H 0.17 0.59 8.06 -2.91 -0.02 0.56 16 46 H 0.21 -0.17 7.42 -2.91 -0.02 -0.19 16 47 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 48 H 0.08 -0.43 7.87 -2.39 -0.02 -0.45 16 49 H 0.17 -1.67 6.29 -2.91 -0.02 -1.69 16 50 H 0.16 -1.37 6.29 -2.91 -0.02 -1.39 16 Total: 0.00 -38.66 414.70 0.29 -38.37 By element: Atomic # 1 Polarization: -28.22 SS G_CDS: -0.40 Total: -28.62 kcal Atomic # 6 Polarization: 3.65 SS G_CDS: 8.24 Total: 11.89 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -6.31 Total: -6.99 kcal Atomic # 8 Polarization: -15.62 SS G_CDS: -3.30 Total: -18.93 kcal Atomic # 14 Polarization: 2.22 SS G_CDS: 2.05 Total: 4.27 kcal Total: -38.66 0.29 -38.37 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.280 kcal (2) G-P(sol) polarization free energy of solvation -38.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.287 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.090 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds