Wall clock time and date at job start Sun Mar 7 2021 07:52:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86306 * 109.46534 * 2 1 4 4 C 1.50701 * 109.47153 * 119.99764 * 2 1 3 5 5 C 1.38233 * 119.93672 * 65.00682 * 4 2 1 6 6 C 1.38188 * 120.06870 * 180.02562 * 5 4 2 7 7 C 1.38675 * 119.95737 * 359.97438 * 6 5 4 8 8 O 1.35916 * 120.06408 * 179.97438 * 7 6 5 9 9 C 1.42903 * 116.99574 * 359.97438 * 8 7 6 10 10 C 1.50703 * 109.46904 * 179.97438 * 9 8 7 11 11 O 1.21278 * 119.99985 * 0.02562 * 10 9 8 12 12 N 1.34779 * 119.99944 * 180.02562 * 10 9 8 13 13 C 1.46499 * 119.99872 * 180.02562 * 12 10 9 14 14 C 1.53000 * 109.46840 * 180.02562 * 13 12 10 15 15 H 1.08992 * 112.85173 * 43.80013 * 14 13 12 16 16 C 1.53787 * 113.61228 * 174.99997 * 14 13 12 17 17 C 1.53776 * 87.07971 * 139.97805 * 16 14 13 18 18 H 1.09004 * 113.61682 * 89.11771 * 17 16 14 19 19 N 1.46500 * 113.61566 * 219.93186 * 17 16 14 20 20 C 1.36884 * 126.40068 * 240.00607 * 19 17 16 21 21 C 1.34669 * 106.81821 * 180.02562 * 20 19 17 22 22 N 1.34128 * 108.02238 * 359.97438 * 21 20 19 23 23 C 1.30505 * 109.25566 * 359.73234 * 22 21 20 24 24 C 1.53781 * 87.08649 * 334.56685 * 17 16 14 25 25 C 1.38836 * 119.87893 * 0.25283 * 7 6 5 26 26 Br 1.89095 * 120.03606 * 179.72709 * 25 7 6 27 27 C 1.38198 * 119.92752 * 359.53752 * 25 7 6 28 28 H 0.96696 * 114.00520 * 60.00140 * 1 2 3 29 29 H 1.08998 * 109.47067 * 240.00612 * 2 1 3 30 30 H 1.48493 * 109.99911 * 60.00470 * 3 2 1 31 31 H 1.48504 * 109.99358 * 181.32118 * 3 2 1 32 32 H 1.07999 * 119.96890 * 359.97438 * 5 4 2 33 33 H 1.08006 * 120.02167 * 179.97438 * 6 5 4 34 34 H 1.09002 * 109.47196 * 59.99967 * 9 8 7 35 35 H 1.09001 * 109.47404 * 299.99781 * 9 8 7 36 36 H 0.97000 * 119.99708 * 359.97438 * 12 10 9 37 37 H 1.09002 * 109.47391 * 59.99686 * 13 12 10 38 38 H 1.09001 * 109.46813 * 299.99742 * 13 12 10 39 39 H 1.08999 * 113.61008 * 254.52793 * 16 14 13 40 40 H 1.08993 * 113.61117 * 25.42890 * 16 14 13 41 41 H 1.07996 * 126.58734 * 359.95768 * 20 19 17 42 42 H 1.07998 * 125.98826 * 180.02562 * 21 20 19 43 43 H 1.07997 * 125.65136 * 180.29033 * 23 22 21 44 44 H 1.08998 * 113.61029 * 270.89062 * 24 17 16 45 45 H 1.08997 * 113.61702 * 139.98220 * 24 17 16 46 46 H 1.07998 * 119.97869 * 180.18102 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6841 -2.0602 1.3970 6 6 2.1430 -2.7141 2.5246 7 6 2.8528 -2.0155 3.4896 8 8 3.3047 -2.6565 4.5997 9 6 3.0120 -4.0510 4.7079 10 6 3.5881 -4.5870 5.9932 11 8 4.1896 -3.8474 6.7429 12 7 3.4349 -5.8881 6.3095 13 6 3.9944 -6.4090 7.5592 14 6 3.6823 -7.9023 7.6743 15 1 3.8441 -8.4418 6.7412 16 6 4.3315 -8.5750 8.8954 17 6 3.0196 -9.3598 9.0620 18 1 2.9991 -10.2986 8.5084 19 7 2.6005 -9.5131 10.4573 20 6 2.4187 -10.6936 11.1259 21 6 2.0344 -10.3776 12.3773 22 7 1.9836 -9.0405 12.4706 23 6 2.3273 -8.5159 11.3261 24 6 2.3240 -8.1988 8.3318 25 6 3.0959 -0.6589 3.3226 26 35 4.0565 0.2997 4.6394 27 6 2.6384 -0.0106 2.1910 28 1 -0.3934 0.4416 -0.7650 29 1 1.7923 -0.5137 -0.8900 30 1 1.5614 2.4679 1.2085 31 1 3.5345 1.7704 -0.0322 32 1 1.1310 -2.6041 0.6456 33 1 1.9491 -3.7687 2.6541 34 1 3.4526 -4.5813 3.8636 35 1 1.9318 -4.1969 4.7048 36 1 2.9534 -6.4795 5.7100 37 1 3.5535 -5.8790 8.4035 38 1 5.0746 -6.2626 7.5624 39 1 5.1869 -9.2024 8.6448 40 1 4.5358 -7.8869 9.7156 41 1 2.5558 -11.6875 10.7262 42 1 1.8078 -11.0779 13.1675 43 1 2.3813 -7.4594 11.1089 44 1 1.9796 -7.4079 8.9981 45 1 1.5588 -8.5225 7.6264 46 1 2.8296 1.0441 2.0589 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:52:26 Heat of formation + Delta-G solvation = 33.447323 kcal Electronic energy + Delta-G solvation = -30197.773365 eV Core-core repulsion = 25717.463262 eV Total energy + Delta-G solvation = -4480.310103 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.13140 -41.76619 -40.92714 -40.06267 -39.05406 -37.37381 -35.89247 -33.63138 -33.49430 -32.35874 -30.95986 -30.33760 -30.06320 -28.35096 -27.22154 -26.37694 -24.78737 -23.98564 -22.55500 -22.35872 -21.99647 -21.70538 -20.44603 -19.67983 -19.01069 -18.52336 -18.13231 -17.70688 -17.39635 -17.11930 -16.96668 -16.62978 -16.27475 -16.10862 -16.00302 -15.42000 -15.22687 -15.05466 -14.87844 -14.69416 -14.56887 -14.46491 -14.27853 -14.04451 -13.95105 -13.90244 -13.72742 -13.61326 -13.30529 -12.56887 -12.48176 -12.34624 -12.22655 -12.10205 -12.03790 -11.95753 -11.79599 -11.10742 -11.01532 -10.87168 -10.51555 -10.43250 -10.34859 -10.06248 -9.43444 -9.35799 -5.05795 -0.11698 -0.01289 0.64986 1.07901 1.19040 1.22896 1.37405 1.57720 1.74436 1.90569 2.27178 2.30062 2.31651 2.92333 3.00142 3.22021 3.26085 3.27623 3.34870 3.51040 3.60423 3.67500 3.68814 3.72962 3.79917 3.80868 3.89495 3.93471 3.94737 4.18341 4.19661 4.21899 4.27921 4.34233 4.45410 4.49660 4.54202 4.58128 4.60661 4.68335 4.78661 4.88909 4.90137 5.11291 5.18650 5.30645 5.33934 5.83530 5.90781 6.17611 6.23156 6.51609 6.95950 7.18428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.064 4.064 3 Si 0.674 3.326 4 C -0.107 4.107 5 C -0.032 4.032 6 C -0.203 4.203 7 C 0.161 3.839 8 O -0.273 6.273 9 C 0.037 3.963 10 C 0.515 3.485 11 O -0.505 6.505 12 N -0.728 5.728 13 C 0.133 3.867 14 C -0.120 4.120 15 H 0.107 0.893 16 C -0.136 4.136 17 C 0.108 3.892 18 H 0.125 0.875 19 N -0.450 5.450 20 C -0.057 4.057 21 C -0.029 4.029 22 N -0.493 5.493 23 C 0.181 3.819 24 C -0.141 4.141 25 C -0.118 4.118 26 Br -0.023 7.023 27 C -0.055 4.055 28 H 0.384 0.616 29 H 0.078 0.922 30 H -0.247 1.247 31 H -0.251 1.251 32 H 0.139 0.861 33 H 0.141 0.859 34 H 0.098 0.902 35 H 0.098 0.902 36 H 0.403 0.597 37 H 0.075 0.925 38 H 0.076 0.924 39 H 0.086 0.914 40 H 0.097 0.903 41 H 0.174 0.826 42 H 0.170 0.830 43 H 0.200 0.800 44 H 0.096 0.904 45 H 0.084 0.916 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.937 -5.151 -10.142 11.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.175 4.175 3 Si 0.575 3.425 4 C -0.108 4.108 5 C -0.050 4.050 6 C -0.222 4.222 7 C 0.113 3.887 8 O -0.185 6.185 9 C -0.042 4.042 10 C 0.299 3.701 11 O -0.378 6.378 12 N -0.382 5.382 13 C 0.010 3.990 14 C -0.140 4.140 15 H 0.125 0.875 16 C -0.174 4.174 17 C 0.005 3.995 18 H 0.143 0.857 19 N -0.133 5.133 20 C -0.190 4.190 21 C -0.177 4.177 22 N -0.211 5.211 23 C -0.101 4.101 24 C -0.179 4.179 25 C -0.198 4.198 26 Br 0.063 6.937 27 C -0.075 4.075 28 H 0.232 0.768 29 H 0.095 0.905 30 H -0.171 1.171 31 H -0.175 1.175 32 H 0.157 0.843 33 H 0.159 0.841 34 H 0.115 0.885 35 H 0.116 0.884 36 H 0.237 0.763 37 H 0.093 0.907 38 H 0.095 0.905 39 H 0.105 0.895 40 H 0.116 0.884 41 H 0.191 0.809 42 H 0.187 0.813 43 H 0.217 0.783 44 H 0.115 0.885 45 H 0.103 0.897 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.611 -3.421 -7.339 8.120 hybrid contribution -0.289 -1.832 -1.309 2.270 sum -0.900 -5.253 -8.648 10.158 Atomic orbital electron populations 1.86484 1.17058 1.81812 1.49857 1.24539 0.85820 1.10241 0.96913 0.95323 0.81234 0.78257 0.87711 1.19229 1.01132 0.94373 0.96039 1.20933 0.94626 0.93300 0.96189 1.21283 1.04115 1.00976 0.95856 1.18583 0.93132 0.90583 0.86421 1.86280 1.72792 1.21499 1.37919 1.22551 1.02011 0.81869 0.97734 1.19943 0.80668 0.82329 0.87141 1.90825 1.39492 1.56764 1.50673 1.45757 1.58920 1.09492 1.24073 1.21361 0.99648 0.91892 0.86108 1.22641 0.96734 0.95439 0.99137 0.87470 1.23448 0.96859 0.99072 0.98051 1.23042 0.96581 1.00281 0.79624 0.85715 1.45575 1.50100 1.06874 1.10735 1.22785 1.10460 0.90885 0.94858 1.22376 1.06441 0.92446 0.96448 1.70347 1.19605 1.08664 1.22460 1.24865 1.03956 0.95742 0.85511 1.23569 0.97159 0.97555 0.99575 1.20928 1.08329 0.92501 0.98028 1.96807 1.72522 1.72840 1.51536 1.20736 0.96175 0.99168 0.91378 0.76817 0.90456 1.17109 1.17516 0.84290 0.84088 0.88450 0.88419 0.76296 0.90705 0.90543 0.89514 0.88448 0.80924 0.81310 0.78311 0.88525 0.89699 0.84782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.47 12.81 -35.23 -0.45 0.01 16 2 C -0.06 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.67 -0.84 29.85 -169.99 -5.07 -5.91 16 4 C -0.11 -0.15 5.38 -104.61 -0.56 -0.72 16 5 C -0.03 0.00 9.68 -39.60 -0.38 -0.39 16 6 C -0.20 0.06 9.04 -39.44 -0.36 -0.30 16 7 C 0.16 0.38 6.68 -39.20 -0.26 0.12 16 8 O -0.27 -0.77 9.01 -39.39 -0.35 -1.12 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.12 16 10 C 0.52 0.17 7.91 -10.98 -0.09 0.08 16 11 O -0.50 -2.88 16.50 -14.35 -0.24 -3.11 16 12 N -0.73 2.53 5.56 -60.29 -0.33 2.19 16 13 C 0.13 -0.43 5.51 -4.04 -0.02 -0.45 16 14 C -0.12 0.67 3.76 -89.80 -0.34 0.34 16 15 H 0.11 -0.74 8.14 -51.93 -0.42 -1.17 16 16 C -0.14 0.60 7.32 -25.92 -0.19 0.41 16 17 C 0.11 -0.42 4.64 -67.12 -0.31 -0.73 16 18 H 0.13 -0.66 8.14 -51.93 -0.42 -1.08 16 19 N -0.45 0.24 2.95 -110.59 -0.33 -0.08 16 20 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 21 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 22 N -0.49 -2.24 11.25 -14.66 -0.16 -2.40 16 23 C 0.18 0.25 11.36 -90.36 -1.03 -0.78 16 24 C -0.14 0.70 7.19 -25.92 -0.19 0.51 16 25 C -0.12 -0.44 6.24 -39.37 -0.25 -0.69 16 26 Br -0.02 -0.11 33.16 -68.01 -2.26 -2.36 16 27 C -0.06 -0.16 8.40 -39.58 -0.33 -0.49 16 28 H 0.38 -2.22 8.74 45.56 0.40 -1.82 16 29 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 30 H -0.25 -0.52 7.04 56.52 0.40 -0.12 16 31 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 32 H 0.14 -0.28 8.06 -52.49 -0.42 -0.70 16 33 H 0.14 -0.53 6.30 -52.48 -0.33 -0.86 16 34 H 0.10 -0.45 7.66 -51.93 -0.40 -0.84 16 35 H 0.10 -0.42 7.66 -51.93 -0.40 -0.82 16 36 H 0.40 -2.74 8.47 -40.82 -0.35 -3.08 16 37 H 0.07 -0.15 7.84 -51.93 -0.41 -0.56 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 39 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 40 H 0.10 -0.33 7.85 -51.93 -0.41 -0.73 16 41 H 0.17 -0.45 8.06 -52.49 -0.42 -0.87 16 42 H 0.17 0.13 8.06 -52.49 -0.42 -0.30 16 43 H 0.20 -0.27 7.46 -52.49 -0.39 -0.66 16 44 H 0.10 -0.39 6.70 -51.93 -0.35 -0.74 16 45 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 46 H 0.13 0.37 4.86 -52.49 -0.26 0.11 16 LS Contribution 406.18 15.07 6.12 6.12 Total: 0.00 -13.67 406.18 -13.37 -27.05 By element: Atomic # 1 Polarization: -11.21 SS G_CDS: -5.88 Total: -17.09 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -4.42 Total: -3.29 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.83 Total: -0.29 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.04 Total: -4.22 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.07 Total: -5.91 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -13.67 -13.37 -27.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.494 kcal (2) G-P(sol) polarization free energy of solvation -13.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.046 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds