Wall clock time and date at job start Sun Mar 7 2021 07:52:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46892 * 1 3 3 C 1.46902 * 110.99840 * 2 1 4 4 C 1.50702 * 109.47027 * 66.04299 * 3 2 1 5 5 O 1.21283 * 120.00262 * 0.02562 * 4 3 2 6 6 N 1.34777 * 119.99928 * 179.72353 * 4 3 2 7 7 C 1.46499 * 120.00199 * 180.27479 * 6 4 3 8 8 C 1.52997 * 109.47555 * 180.02562 * 7 6 4 9 9 H 1.08997 * 112.85064 * 316.20457 * 8 7 6 10 10 C 1.53788 * 113.61016 * 87.50309 * 8 7 6 11 11 C 1.53788 * 87.07852 * 139.98544 * 10 8 7 12 12 H 1.08999 * 113.61484 * 89.11537 * 11 10 8 13 13 N 1.46502 * 113.68803 * 220.01013 * 11 10 8 14 14 C 1.36878 * 126.39246 * 217.53444 * 13 11 10 15 15 C 1.34670 * 106.81849 * 179.97438 * 14 13 11 16 16 N 1.34135 * 108.01639 * 359.97438 * 15 14 13 17 17 C 1.30495 * 109.25651 * 359.72656 * 16 15 14 18 18 C 1.53777 * 113.61546 * 185.00031 * 8 7 6 19 19 C 1.39676 * 111.00466 * 236.04819 * 2 1 3 20 20 C 1.38891 * 120.07054 * 243.67633 * 19 2 1 21 21 C 1.50697 * 120.03877 * 0.02562 * 20 19 2 22 22 O 1.42895 * 109.46909 * 284.99639 * 21 20 19 23 23 Si 1.86308 * 109.46878 * 165.00115 * 21 20 19 24 24 C 1.38130 * 119.92054 * 179.78678 * 20 19 2 25 25 C 1.38265 * 120.07136 * 0.48890 * 24 20 19 26 26 C 1.50705 * 119.92254 * 179.76570 * 25 24 20 27 27 F 1.39901 * 109.47190 * 179.97438 * 26 25 24 28 28 F 1.39902 * 109.46890 * 299.97669 * 26 25 24 29 29 F 1.39899 * 109.46958 * 59.97692 * 26 25 24 30 30 C 1.38302 * 120.15301 * 359.74073 * 25 24 20 31 31 C 1.38078 * 120.07792 * 0.02562 * 30 25 24 32 32 H 1.09001 * 109.47753 * 60.00231 * 1 2 3 33 33 H 1.09011 * 109.46904 * 179.97438 * 1 2 3 34 34 H 1.09001 * 109.47664 * 300.00084 * 1 2 3 35 35 H 1.09004 * 109.47131 * 306.04543 * 3 2 1 36 36 H 1.08994 * 109.47471 * 186.04293 * 3 2 1 37 37 H 0.97000 * 120.00317 * 0.28382 * 6 4 3 38 38 H 1.08998 * 109.47134 * 300.00670 * 7 6 4 39 39 H 1.09002 * 109.46857 * 59.99862 * 7 6 4 40 40 H 1.09001 * 113.61186 * 254.52803 * 10 8 7 41 41 H 1.08995 * 113.61392 * 25.43798 * 10 8 7 42 42 H 1.08003 * 126.59813 * 359.96345 * 14 13 11 43 43 H 1.08002 * 125.99474 * 180.02562 * 15 14 13 44 44 H 1.08004 * 125.65158 * 180.29369 * 17 16 15 45 45 H 1.08998 * 113.61882 * 334.57085 * 18 8 7 46 46 H 1.09004 * 113.61343 * 105.39483 * 18 8 7 47 47 H 1.08994 * 109.47685 * 44.99897 * 21 20 19 48 48 H 0.96706 * 114.00427 * 300.00552 * 22 21 20 49 49 H 1.48501 * 109.99776 * 179.97438 * 23 21 20 50 50 H 1.48497 * 109.99986 * 301.31711 * 23 21 20 51 51 H 1.07992 * 119.96360 * 180.22982 * 24 20 19 52 52 H 1.08004 * 119.96460 * 180.02562 * 30 25 24 53 53 H 1.07997 * 120.04605 * 179.97438 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6367 2.0472 1.2984 5 8 1.0052 1.4454 2.1411 6 7 2.0230 3.3182 1.5258 7 6 1.6796 3.9731 2.7905 8 6 2.2320 5.3999 2.7925 9 1 3.2509 5.4598 2.4098 10 6 1.2764 6.4313 2.1698 11 6 1.7002 7.3877 3.2970 12 1 2.5733 7.9923 3.0516 13 7 0.5953 8.1795 3.8436 14 6 0.6552 9.4851 4.2500 15 6 -0.5772 9.8161 4.6806 16 7 -1.3681 8.7418 4.5403 17 6 -0.6740 7.7596 4.0338 18 6 2.0311 6.1363 4.1274 19 6 1.9696 -0.7282 -1.0816 20 6 2.7166 -1.8781 -0.8604 21 6 2.9878 -2.3422 0.5474 22 8 3.9820 -1.5054 1.1416 23 14 3.5968 -4.1026 0.5144 24 6 3.2065 -2.5983 -1.9324 25 6 2.9625 -2.1702 -3.2243 26 6 3.5030 -2.9557 -4.3913 27 9 3.1289 -2.3322 -5.5865 28 9 4.8987 -3.0099 -4.3105 29 9 2.9833 -4.2542 -4.3602 30 6 2.2230 -1.0231 -3.4480 31 6 1.7262 -0.3009 -2.3810 32 1 -0.3635 0.5138 -0.8900 33 1 -0.3633 -1.0278 -0.0005 34 1 -0.3634 0.5138 0.8900 35 1 1.5610 1.9274 -0.8309 36 1 3.0796 1.3445 -0.1082 37 1 2.5283 3.7995 0.8520 38 1 0.5957 4.0034 2.9013 39 1 2.1140 3.4136 3.6190 40 1 1.5801 6.7645 1.1774 41 1 0.2275 6.1388 2.2166 42 1 1.5237 10.1267 4.2296 43 1 -0.8765 10.7781 5.0697 44 1 -1.0515 6.7734 3.8071 45 1 1.1884 5.7632 4.7095 46 1 2.9437 6.2302 4.7161 47 1 2.0694 -2.2864 1.1318 48 1 4.8280 -1.5059 0.6730 49 1 3.8685 -4.5720 1.8968 50 1 2.5852 -4.9780 -0.1301 51 1 3.7843 -3.4945 -1.7613 52 1 2.0339 -0.6917 -4.4583 53 1 1.1492 0.5950 -2.5563 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567772_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:52:29 Heat of formation + Delta-G solvation = -68.828871 kcal Electronic energy + Delta-G solvation = -40934.793352 eV Core-core repulsion = 35168.147720 eV Total energy + Delta-G solvation = -5766.645632 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.171 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -51.17697 -48.70665 -48.63519 -43.09333 -41.71210 -40.72960 -39.80853 -37.74361 -37.54437 -35.66374 -33.47620 -32.97493 -32.12495 -30.49351 -30.08065 -28.17361 -27.47967 -26.98397 -26.83366 -25.14199 -24.35902 -23.20752 -22.47750 -22.09232 -21.86388 -21.38862 -20.15321 -19.59092 -19.49617 -19.39257 -18.65836 -18.34542 -17.71013 -17.44125 -17.07518 -16.80947 -16.65248 -16.44624 -16.23483 -16.04586 -15.85741 -15.54358 -15.50171 -15.33206 -15.23133 -15.14516 -15.07815 -14.94841 -14.81807 -14.79660 -14.79329 -14.60581 -14.41708 -14.28204 -14.22803 -13.94029 -13.66455 -13.60276 -13.36885 -13.22772 -13.13540 -12.91019 -12.77211 -12.57152 -12.28753 -12.09898 -11.96848 -11.77065 -11.60507 -10.96122 -10.86640 -10.47925 -10.40610 -10.20506 -10.10569 -10.06226 -9.54356 -9.46826 -5.08791 -0.33018 0.02984 1.10069 1.25165 1.57274 1.61539 1.65871 1.85277 1.93541 2.01199 2.19919 2.20637 2.65466 2.77885 2.96040 3.29012 3.36697 3.38213 3.50445 3.63398 3.65238 3.68311 3.73591 3.79103 3.82416 3.99170 4.05647 4.06177 4.12189 4.15383 4.22407 4.30625 4.33870 4.41711 4.44849 4.46869 4.53174 4.60064 4.64091 4.64560 4.72461 4.74596 4.82345 4.89598 4.93342 4.96876 4.98515 4.99331 5.18296 5.21271 5.40256 5.41892 5.51517 5.64967 5.82786 6.17036 6.28883 6.58882 6.86206 7.13714 7.31203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.503 5.503 3 C 0.047 3.953 4 C 0.512 3.488 5 O -0.567 6.567 6 N -0.716 5.716 7 C 0.135 3.865 8 C -0.100 4.100 9 H 0.130 0.870 10 C -0.135 4.135 11 C 0.103 3.897 12 H 0.147 0.853 13 N -0.444 5.444 14 C -0.047 4.047 15 C -0.067 4.067 16 N -0.544 5.544 17 C 0.173 3.827 18 C -0.137 4.137 19 C 0.140 3.860 20 C -0.103 4.103 21 C -0.043 4.043 22 O -0.540 6.540 23 Si 0.750 3.250 24 C -0.060 4.060 25 C -0.186 4.186 26 C 0.509 3.491 27 F -0.178 7.178 28 F -0.175 7.175 29 F -0.183 7.183 30 C -0.053 4.053 31 C -0.144 4.144 32 H 0.048 0.952 33 H 0.062 0.938 34 H 0.076 0.924 35 H 0.097 0.903 36 H 0.123 0.877 37 H 0.418 0.582 38 H 0.057 0.943 39 H 0.055 0.945 40 H 0.099 0.901 41 H 0.085 0.915 42 H 0.203 0.797 43 H 0.174 0.826 44 H 0.216 0.784 45 H 0.081 0.919 46 H 0.092 0.908 47 H 0.100 0.900 48 H 0.390 0.610 49 H -0.297 1.297 50 H -0.287 1.287 51 H 0.153 0.847 52 H 0.157 0.843 53 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.727 4.335 -5.977 10.687 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.224 5.224 3 C -0.082 4.082 4 C 0.299 3.701 5 O -0.445 6.445 6 N -0.370 5.370 7 C 0.011 3.989 8 C -0.119 4.119 9 H 0.148 0.852 10 C -0.173 4.173 11 C 0.001 3.999 12 H 0.165 0.835 13 N -0.126 5.126 14 C -0.181 4.181 15 C -0.213 4.213 16 N -0.263 5.263 17 C -0.110 4.110 18 C -0.176 4.176 19 C 0.046 3.954 20 C -0.105 4.105 21 C -0.154 4.154 22 O -0.347 6.347 23 Si 0.656 3.344 24 C -0.078 4.078 25 C -0.187 4.187 26 C 0.455 3.545 27 F -0.160 7.160 28 F -0.157 7.157 29 F -0.165 7.165 30 C -0.071 4.071 31 C -0.163 4.163 32 H 0.066 0.934 33 H 0.081 0.919 34 H 0.095 0.905 35 H 0.114 0.886 36 H 0.141 0.859 37 H 0.255 0.745 38 H 0.075 0.925 39 H 0.073 0.927 40 H 0.117 0.883 41 H 0.104 0.896 42 H 0.220 0.780 43 H 0.191 0.809 44 H 0.232 0.768 45 H 0.099 0.901 46 H 0.110 0.890 47 H 0.117 0.883 48 H 0.239 0.761 49 H -0.225 1.225 50 H -0.214 1.214 51 H 0.170 0.830 52 H 0.174 0.826 53 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 6.102 2.865 -4.112 7.896 hybrid contribution -0.086 0.636 -0.889 1.097 sum 6.016 3.502 -5.001 8.571 Atomic orbital electron populations 1.22566 0.84781 1.02631 1.02162 1.59074 1.09110 1.13514 1.40671 1.22076 1.03466 0.87753 0.94953 1.20792 0.78617 0.81683 0.89018 1.90710 1.40997 1.64925 1.47864 1.45797 1.57854 1.13268 1.20107 1.21223 0.99597 0.92156 0.85939 1.22533 1.01239 0.91244 0.96874 0.85233 1.23525 1.00537 0.94396 0.98793 1.23417 0.89128 0.91347 0.96046 0.83525 1.45770 1.10171 1.10599 1.46066 1.23228 1.01652 0.86657 1.06569 1.22672 0.91393 0.99112 1.08161 1.70260 1.34869 1.01435 1.19704 1.25133 0.81554 1.00965 1.03317 1.23431 1.03479 0.93752 0.96959 1.18880 0.94261 0.93273 0.88982 1.20236 0.99031 0.95506 0.95707 1.24785 0.94912 1.04815 0.90905 1.86575 1.24845 1.68792 1.54519 0.94590 0.86734 0.72970 0.80110 1.20774 0.97594 0.98998 0.90400 1.19945 1.06713 0.99688 0.92397 1.18350 0.75819 0.77666 0.82693 1.93175 1.91223 1.82276 1.49284 1.93236 1.29778 1.96332 1.96322 1.93230 1.86681 1.39923 1.96618 1.21139 0.92989 0.91712 1.01307 1.21895 1.01123 1.01732 0.91583 0.93356 0.91889 0.90521 0.88573 0.85881 0.74534 0.92502 0.92657 0.88257 0.89632 0.77968 0.80897 0.76766 0.90075 0.88966 0.88304 0.76084 1.22476 1.21390 0.83004 0.82568 0.82625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 8.94 127.69 1.14 1.15 16 2 N -0.50 0.28 3.71 -724.42 -2.69 -2.41 16 3 C 0.05 -0.27 5.03 85.56 0.43 0.16 16 4 C 0.51 -0.34 7.55 87.66 0.66 0.32 16 5 O -0.57 -5.57 14.31 -3.04 -0.04 -5.61 16 6 N -0.72 5.45 5.56 -463.06 -2.57 2.88 16 7 C 0.13 -0.83 5.51 86.38 0.48 -0.36 16 8 C -0.10 1.23 3.75 -10.27 -0.04 1.19 16 9 H 0.13 -2.10 8.14 -2.39 -0.02 -2.12 16 10 C -0.13 1.54 7.19 31.13 0.22 1.76 16 11 C 0.10 -0.95 4.64 45.52 0.21 -0.74 16 12 H 0.15 -1.96 8.14 -2.39 -0.02 -1.98 16 13 N -0.44 0.69 2.94 -503.78 -1.48 -0.79 16 14 C -0.05 0.00 11.58 83.09 0.96 0.96 16 15 C -0.07 -0.41 11.87 83.52 0.99 0.58 16 16 N -0.54 -5.69 11.25 -200.30 -2.25 -7.95 16 17 C 0.17 0.59 11.39 180.26 2.05 2.64 16 18 C -0.14 1.28 7.32 31.12 0.23 1.51 16 19 C 0.14 -0.35 4.65 38.21 0.18 -0.18 16 20 C -0.10 0.18 5.28 -19.73 -0.10 0.08 16 21 C -0.04 -0.02 2.34 71.23 0.17 0.15 16 22 O -0.54 -0.03 12.88 -148.98 -1.92 -1.95 16 23 Si 0.75 -0.45 29.92 68.60 2.05 1.60 16 24 C -0.06 0.19 8.20 22.25 0.18 0.37 16 25 C -0.19 0.51 5.37 -19.84 -0.11 0.40 16 26 C 0.51 -0.23 3.31 71.24 0.24 0.01 16 27 F -0.18 -0.04 15.97 44.97 0.72 0.68 16 28 F -0.18 -0.02 17.24 44.97 0.78 0.75 16 29 F -0.18 -0.42 17.23 44.97 0.78 0.35 16 30 C -0.05 0.28 9.42 22.25 0.21 0.49 16 31 C -0.14 0.90 8.70 22.40 0.19 1.09 16 32 H 0.05 -0.20 7.47 -2.39 -0.02 -0.22 16 33 H 0.06 0.10 8.13 -2.38 -0.02 0.09 16 34 H 0.08 0.38 5.88 -2.39 -0.01 0.37 16 35 H 0.10 -1.10 7.48 -2.38 -0.02 -1.12 16 36 H 0.12 -1.03 8.06 -2.39 -0.02 -1.05 16 37 H 0.42 -6.09 8.47 -92.71 -0.79 -6.87 16 38 H 0.06 -0.17 7.84 -2.39 -0.02 -0.19 16 39 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 40 H 0.10 -1.37 8.14 -2.39 -0.02 -1.39 16 41 H 0.09 -0.75 6.67 -2.39 -0.02 -0.76 16 42 H 0.20 -1.42 8.06 -2.91 -0.02 -1.45 16 43 H 0.17 0.53 8.06 -2.91 -0.02 0.51 16 44 H 0.22 -0.40 7.42 -2.91 -0.02 -0.42 16 45 H 0.08 -0.46 7.87 -2.39 -0.02 -0.48 16 46 H 0.09 -0.93 8.14 -2.38 -0.02 -0.95 16 47 H 0.10 0.53 7.78 -2.39 -0.02 0.52 16 48 H 0.39 -3.54 8.70 -74.05 -0.64 -4.18 16 49 H -0.30 -2.19 7.11 99.48 0.71 -1.48 16 50 H -0.29 -1.38 7.11 99.48 0.71 -0.67 16 51 H 0.15 -0.94 5.12 -2.91 -0.01 -0.95 16 52 H 0.16 -1.29 7.15 -2.91 -0.02 -1.31 16 53 H 0.16 -1.66 7.16 -2.91 -0.02 -1.68 16 Total: 0.00 -30.03 445.31 1.26 -28.78 By element: Atomic # 1 Polarization: -27.53 SS G_CDS: -0.40 Total: -27.92 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: 8.30 Total: 11.59 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -9.00 Total: -8.27 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -1.96 Total: -7.56 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 2.27 Total: 1.79 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: 2.05 Total: 1.60 kcal Total: -30.03 1.26 -28.78 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.051 kcal (2) G-P(sol) polarization free energy of solvation -30.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds