Wall clock time and date at job start Sun Mar 7 2021 07:52:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47341 * 2 1 4 4 C 1.50701 * 109.46882 * 240.00227 * 2 1 3 5 5 C 1.34235 * 126.50482 * 105.02143 * 4 2 1 6 6 N 1.36826 * 109.94409 * 179.97438 * 5 4 2 7 7 C 1.46500 * 125.06797 * 180.02562 * 6 5 4 8 8 C 1.50702 * 109.46932 * 265.02811 * 7 6 5 9 9 O 1.21279 * 120.00058 * 359.97438 * 8 7 6 10 10 N 1.34778 * 119.99966 * 180.02562 * 8 7 6 11 11 C 1.46502 * 119.99841 * 179.97438 * 10 8 7 12 12 C 1.53004 * 109.46721 * 179.97438 * 11 10 8 13 13 H 1.09006 * 112.84532 * 316.18964 * 12 11 10 14 14 C 1.53773 * 113.61577 * 87.50145 * 12 11 10 15 15 C 1.53784 * 87.08090 * 139.97675 * 14 12 11 16 16 H 1.09005 * 113.60924 * 89.11544 * 15 14 12 17 17 N 1.46494 * 113.61598 * 220.01701 * 15 14 12 18 18 C 1.36881 * 126.40022 * 217.49853 * 17 15 14 19 19 C 1.34665 * 106.82422 * 179.97438 * 18 17 15 20 20 N 1.34135 * 108.01625 * 0.02562 * 19 18 17 21 21 C 1.30505 * 109.25495 * 359.72486 * 20 19 18 22 22 C 1.53776 * 87.08057 * 334.56847 * 15 14 12 23 23 C 1.37698 * 109.87369 * 0.02562 * 6 5 4 24 24 C 1.39084 * 133.51266 * 180.02562 * 23 6 5 25 25 C 1.37785 * 119.78026 * 179.97438 * 24 23 6 26 26 C 1.38790 * 120.66344 * 359.97438 * 25 24 23 27 27 C 1.36663 * 120.52878 * 0.02562 * 26 25 24 28 28 C 1.39588 * 119.76511 * 359.67778 * 27 26 25 29 29 H 0.96706 * 114.00057 * 59.99229 * 1 2 3 30 30 H 1.09004 * 109.46985 * 120.00760 * 2 1 3 31 31 H 1.48495 * 109.99824 * 60.00516 * 3 2 1 32 32 H 1.48498 * 109.99663 * 181.32155 * 3 2 1 33 33 H 1.08010 * 125.02256 * 0.02562 * 5 4 2 34 34 H 1.09002 * 109.46993 * 25.02128 * 7 6 5 35 35 H 1.08994 * 109.47770 * 145.02140 * 7 6 5 36 36 H 0.96997 * 119.99743 * 359.97438 * 10 8 7 37 37 H 1.09002 * 109.47015 * 299.99615 * 11 10 8 38 38 H 1.08998 * 109.47066 * 59.99778 * 11 10 8 39 39 H 1.09001 * 113.61509 * 254.52303 * 14 12 11 40 40 H 1.09000 * 113.61407 * 25.43003 * 14 12 11 41 41 H 1.08005 * 126.58987 * 359.96659 * 18 17 15 42 42 H 1.07994 * 125.99519 * 179.97438 * 19 18 17 43 43 H 1.07995 * 125.64915 * 180.29457 * 21 20 19 44 44 H 1.09002 * 113.61441 * 270.87990 * 22 15 14 45 45 H 1.09001 * 113.69094 * 139.99149 * 22 15 14 46 46 H 1.07999 * 120.10968 * 359.93030 * 24 23 6 47 47 H 1.07994 * 119.67271 * 179.97438 * 25 24 23 48 48 H 1.07995 * 119.73611 * 180.02562 * 26 25 24 49 49 H 1.08006 * 120.11661 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4611 -0.1377 -2.3229 6 7 2.8034 -1.0990 -3.2344 7 6 3.4091 -0.8405 -4.5430 8 6 2.3300 -0.7830 -5.5934 9 8 1.1694 -0.9428 -5.2798 10 7 2.6548 -0.5551 -6.8814 11 6 1.6058 -0.4998 -7.9026 12 6 2.2384 -0.2297 -9.2694 13 1 3.0039 0.5455 -9.2356 14 6 2.6821 -1.5048 -10.0056 15 6 2.1523 -0.8513 -11.2930 16 1 2.8952 -0.2469 -11.8134 17 7 1.4533 -1.7844 -12.1800 18 6 1.4981 -1.7926 -13.5481 19 6 0.7162 -2.8097 -13.9575 20 7 0.2073 -3.4059 -12.8691 21 6 0.6489 -2.8005 -11.8006 22 6 1.2102 -0.0316 -10.3956 23 6 2.4939 -2.3457 -2.7384 24 6 2.6293 -3.6362 -3.2392 25 6 2.2152 -4.7107 -2.4827 26 6 1.6636 -4.5194 -1.2236 27 6 1.5212 -3.2600 -0.7122 28 6 1.9398 -2.1575 -1.4589 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5140 0.8899 31 1 1.5617 2.4678 1.2085 32 1 3.5346 1.7701 -0.0322 33 1 2.5977 0.9248 -2.4613 34 1 3.9406 0.1108 -4.5158 35 1 4.1087 -1.6407 -4.7841 36 1 3.5831 -0.4277 -7.1323 37 1 1.0743 -1.4511 -7.9294 38 1 0.9062 0.3006 -7.6619 39 1 3.7615 -1.6561 -10.0051 40 1 2.1286 -2.3955 -9.7084 41 1 2.0537 -1.1138 -14.1781 42 1 0.5306 -3.0947 -14.9825 43 1 0.4090 -3.0668 -10.7818 44 1 0.2543 -0.5195 -10.2051 45 1 1.1004 1.0067 -10.7088 46 1 3.0570 -3.7954 -4.2180 47 1 2.3208 -5.7120 -2.8734 48 1 1.3444 -5.3724 -0.6433 49 1 1.0907 -3.1188 0.2683 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567772_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:52:57 Heat of formation + Delta-G solvation = 100.940832 kcal Electronic energy + Delta-G solvation = -31874.194954 eV Core-core repulsion = 27577.895973 eV Total energy + Delta-G solvation = -4296.298981 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.15173 -42.50676 -40.98640 -40.00174 -38.00915 -37.54086 -35.92300 -34.11902 -33.50447 -31.52286 -30.40024 -30.14637 -29.75645 -28.24370 -27.24673 -25.75921 -24.61923 -23.61190 -22.61789 -22.57339 -22.01065 -21.69865 -20.64575 -20.43279 -19.04752 -18.46137 -18.24619 -17.72030 -17.32711 -17.20826 -16.74084 -16.45695 -16.33505 -16.11938 -15.89317 -15.43237 -15.39219 -15.29800 -14.93806 -14.79255 -14.66665 -14.53847 -14.50204 -14.35414 -13.97174 -13.96382 -13.74714 -13.61828 -13.44847 -13.21438 -12.61689 -12.51874 -12.46758 -12.13932 -12.12961 -12.02753 -11.98402 -11.69621 -11.16934 -10.88808 -10.53509 -10.44573 -10.37278 -10.22646 -9.45218 -9.04819 -8.55274 -5.03471 0.25473 0.76898 1.06432 1.32103 1.36040 1.37520 1.65201 1.70598 1.72207 2.01685 2.04180 2.28559 2.89968 2.97296 3.09651 3.23934 3.26974 3.42441 3.43931 3.62498 3.66078 3.73987 3.76613 3.78117 3.83349 3.87006 3.92899 4.06118 4.15947 4.25323 4.29430 4.31657 4.34732 4.42759 4.52147 4.55675 4.55776 4.58223 4.69293 4.76858 4.77062 4.86703 4.88153 4.96619 5.09694 5.23264 5.32044 5.62460 5.78444 5.81857 5.83841 5.87830 6.06647 6.21341 6.26597 6.33693 6.76794 6.91646 7.16701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.467 5.467 7 C 0.092 3.908 8 C 0.490 3.510 9 O -0.511 6.511 10 N -0.729 5.729 11 C 0.132 3.868 12 C -0.120 4.120 13 H 0.107 0.893 14 C -0.141 4.141 15 C 0.108 3.892 16 H 0.125 0.875 17 N -0.450 5.450 18 C -0.057 4.057 19 C -0.030 4.030 20 N -0.493 5.493 21 C 0.181 3.819 22 C -0.136 4.136 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.096 4.096 26 C -0.146 4.146 27 C -0.065 4.065 28 C -0.087 4.087 29 H 0.377 0.623 30 H 0.110 0.890 31 H -0.254 1.254 32 H -0.256 1.256 33 H 0.171 0.829 34 H 0.123 0.877 35 H 0.117 0.883 36 H 0.402 0.598 37 H 0.073 0.927 38 H 0.075 0.925 39 H 0.084 0.916 40 H 0.096 0.904 41 H 0.174 0.826 42 H 0.170 0.830 43 H 0.200 0.800 44 H 0.096 0.904 45 H 0.086 0.914 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.680 5.590 -4.055 9.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.057 4.057 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.274 3.726 9 O -0.384 6.384 10 N -0.383 5.383 11 C 0.009 3.991 12 C -0.139 4.139 13 H 0.125 0.875 14 C -0.179 4.179 15 C 0.005 3.995 16 H 0.143 0.857 17 N -0.133 5.133 18 C -0.190 4.190 19 C -0.177 4.177 20 N -0.210 5.210 21 C -0.101 4.101 22 C -0.174 4.174 23 C 0.004 3.996 24 C -0.149 4.149 25 C -0.115 4.115 26 C -0.165 4.165 27 C -0.084 4.084 28 C -0.091 4.091 29 H 0.225 0.775 30 H 0.128 0.872 31 H -0.179 1.179 32 H -0.181 1.181 33 H 0.188 0.812 34 H 0.141 0.859 35 H 0.135 0.865 36 H 0.237 0.763 37 H 0.091 0.909 38 H 0.093 0.907 39 H 0.103 0.897 40 H 0.114 0.886 41 H 0.191 0.809 42 H 0.187 0.813 43 H 0.217 0.783 44 H 0.115 0.885 45 H 0.105 0.895 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 6.060 5.266 -3.058 8.591 hybrid contribution 1.179 0.200 -0.286 1.230 sum 7.239 5.466 -3.344 9.667 Atomic orbital electron populations 1.86494 1.17414 1.81818 1.48969 1.24334 0.84803 1.08743 0.96220 0.95268 0.80606 0.77856 0.87865 1.20656 1.09615 0.92390 0.97802 1.21498 1.01250 0.93758 0.89156 1.43189 1.53898 1.04642 1.13288 1.21577 0.94528 1.05972 0.81373 1.21019 0.90837 0.77277 0.83474 1.90830 1.19844 1.46968 1.80786 1.45926 1.11094 1.74237 1.07025 1.21340 0.90014 1.02756 0.85010 1.22638 0.99406 0.98670 0.93207 0.87506 1.23564 1.02804 0.98032 0.93460 1.23040 0.95712 0.91387 0.89383 0.85716 1.45569 1.36369 1.24952 1.06403 1.22786 1.07854 1.04890 0.83445 1.22380 1.00465 0.96408 0.98462 1.70350 1.24594 1.28226 0.97879 1.24855 0.95796 0.89255 1.00173 1.23444 0.98306 1.01717 0.93965 1.18162 1.01465 0.85838 0.94104 1.19944 1.05366 0.89274 1.00304 1.20829 0.98306 0.97970 0.94441 1.20676 1.02389 0.96953 0.96442 1.20314 0.97794 0.90963 0.99317 1.18951 1.03203 0.92827 0.94134 0.77547 0.87245 1.17882 1.18057 0.81219 0.85915 0.86492 0.76338 0.90916 0.90682 0.89724 0.88583 0.80918 0.81298 0.78340 0.88504 0.89530 0.86777 0.85710 0.85912 0.85961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.18 12.88 -35.23 -0.45 -1.64 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.51 30.75 -169.99 -5.23 -5.73 16 4 C -0.20 -0.42 5.58 -102.71 -0.57 -1.00 16 5 C 0.07 0.01 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.28 2.27 -115.71 -0.26 -0.55 16 7 C 0.09 -0.32 6.48 -5.19 -0.03 -0.35 16 8 C 0.49 -0.70 7.90 -10.98 -0.09 -0.79 16 9 O -0.51 -1.97 16.42 5.56 0.09 -1.88 16 10 N -0.73 3.40 5.56 -60.29 -0.33 3.06 16 11 C 0.13 -0.53 5.51 -4.04 -0.02 -0.56 16 12 C -0.12 0.75 3.75 -89.81 -0.34 0.41 16 13 H 0.11 -0.80 8.14 -51.93 -0.42 -1.23 16 14 C -0.14 0.76 7.18 -25.92 -0.19 0.58 16 15 C 0.11 -0.47 4.64 -67.12 -0.31 -0.78 16 16 H 0.12 -0.70 8.14 -51.93 -0.42 -1.13 16 17 N -0.45 0.40 2.94 -110.60 -0.33 0.07 16 18 C -0.06 0.00 11.58 -16.56 -0.19 -0.19 16 19 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 20 N -0.49 -2.08 11.25 -14.67 -0.17 -2.25 16 21 C 0.18 0.19 11.38 -90.37 -1.03 -0.84 16 22 C -0.14 0.66 7.32 -25.92 -0.19 0.47 16 23 C 0.11 0.34 6.80 -83.99 -0.57 -0.23 16 24 C -0.13 -0.30 10.00 -39.43 -0.39 -0.69 16 25 C -0.10 -0.21 10.01 -39.54 -0.40 -0.60 16 26 C -0.15 -0.39 9.97 -39.95 -0.40 -0.78 16 27 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 28 C -0.09 -0.35 6.35 -105.13 -0.67 -1.02 16 29 H 0.38 -0.50 8.70 45.56 0.40 -0.10 16 30 H 0.11 0.20 7.96 -51.93 -0.41 -0.21 16 31 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 32 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 33 H 0.17 -0.59 6.34 -52.48 -0.33 -0.92 16 34 H 0.12 -0.84 8.12 -51.93 -0.42 -1.26 16 35 H 0.12 -0.63 8.14 -51.93 -0.42 -1.05 16 36 H 0.40 -3.12 8.47 -40.82 -0.35 -3.47 16 37 H 0.07 -0.18 7.84 -51.93 -0.41 -0.59 16 38 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.08 -0.51 8.14 -51.93 -0.42 -0.93 16 40 H 0.10 -0.43 6.66 -51.93 -0.35 -0.78 16 41 H 0.17 -0.50 8.06 -52.48 -0.42 -0.92 16 42 H 0.17 0.08 8.06 -52.49 -0.42 -0.34 16 43 H 0.20 -0.34 7.42 -52.49 -0.39 -0.73 16 44 H 0.10 -0.36 7.87 -51.93 -0.41 -0.77 16 45 H 0.09 -0.44 8.14 -51.93 -0.42 -0.87 16 46 H 0.11 0.03 8.06 -52.49 -0.42 -0.39 16 47 H 0.12 0.00 8.06 -52.49 -0.42 -0.43 16 48 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 412.22 15.07 6.21 6.21 Total: 0.00 -13.91 412.22 -13.46 -27.37 By element: Atomic # 1 Polarization: -10.36 SS G_CDS: -6.94 Total: -17.30 kcal Atomic # 6 Polarization: -1.32 SS G_CDS: -6.05 Total: -7.37 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -1.09 Total: 0.35 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.36 Total: -3.51 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.23 Total: -5.73 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -13.91 -13.46 -27.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.308 kcal (2) G-P(sol) polarization free energy of solvation -13.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.367 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds