Wall clock time and date at job start Sun Mar 7 2021 07:52:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47341 * 2 1 4 4 C 1.50701 * 109.46882 * 240.00227 * 2 1 3 5 5 C 1.34235 * 126.50482 * 105.02143 * 4 2 1 6 6 N 1.36826 * 109.94409 * 179.97438 * 5 4 2 7 7 C 1.46500 * 125.06797 * 180.02562 * 6 5 4 8 8 C 1.50702 * 109.46932 * 265.02811 * 7 6 5 9 9 O 1.21279 * 120.00058 * 359.97438 * 8 7 6 10 10 N 1.34778 * 119.99966 * 180.02562 * 8 7 6 11 11 C 1.46502 * 119.99841 * 179.97438 * 10 8 7 12 12 C 1.53004 * 109.46721 * 179.97438 * 11 10 8 13 13 H 1.09006 * 112.84532 * 316.18964 * 12 11 10 14 14 C 1.53773 * 113.61577 * 87.50145 * 12 11 10 15 15 C 1.53784 * 87.08090 * 139.97675 * 14 12 11 16 16 H 1.09005 * 113.60924 * 89.11544 * 15 14 12 17 17 N 1.46494 * 113.61598 * 220.01701 * 15 14 12 18 18 C 1.36881 * 126.40022 * 217.49853 * 17 15 14 19 19 C 1.34665 * 106.82422 * 179.97438 * 18 17 15 20 20 N 1.34135 * 108.01625 * 0.02562 * 19 18 17 21 21 C 1.30505 * 109.25495 * 359.72486 * 20 19 18 22 22 C 1.53776 * 87.08057 * 334.56847 * 15 14 12 23 23 C 1.37698 * 109.87369 * 0.02562 * 6 5 4 24 24 C 1.39084 * 133.51266 * 180.02562 * 23 6 5 25 25 C 1.37785 * 119.78026 * 179.97438 * 24 23 6 26 26 C 1.38790 * 120.66344 * 359.97438 * 25 24 23 27 27 C 1.36663 * 120.52878 * 0.02562 * 26 25 24 28 28 C 1.39588 * 119.76511 * 359.67778 * 27 26 25 29 29 H 0.96706 * 114.00057 * 59.99229 * 1 2 3 30 30 H 1.09004 * 109.46985 * 120.00760 * 2 1 3 31 31 H 1.48495 * 109.99824 * 60.00516 * 3 2 1 32 32 H 1.48498 * 109.99663 * 181.32155 * 3 2 1 33 33 H 1.08010 * 125.02256 * 0.02562 * 5 4 2 34 34 H 1.09002 * 109.46993 * 25.02128 * 7 6 5 35 35 H 1.08994 * 109.47770 * 145.02140 * 7 6 5 36 36 H 0.96997 * 119.99743 * 359.97438 * 10 8 7 37 37 H 1.09002 * 109.47015 * 299.99615 * 11 10 8 38 38 H 1.08998 * 109.47066 * 59.99778 * 11 10 8 39 39 H 1.09001 * 113.61509 * 254.52303 * 14 12 11 40 40 H 1.09000 * 113.61407 * 25.43003 * 14 12 11 41 41 H 1.08005 * 126.58987 * 359.96659 * 18 17 15 42 42 H 1.07994 * 125.99519 * 179.97438 * 19 18 17 43 43 H 1.07995 * 125.64915 * 180.29457 * 21 20 19 44 44 H 1.09002 * 113.61441 * 270.87990 * 22 15 14 45 45 H 1.09001 * 113.69094 * 139.99149 * 22 15 14 46 46 H 1.07999 * 120.10968 * 359.93030 * 24 23 6 47 47 H 1.07994 * 119.67271 * 179.97438 * 25 24 23 48 48 H 1.07995 * 119.73611 * 180.02562 * 26 25 24 49 49 H 1.08006 * 120.11661 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4611 -0.1377 -2.3229 6 7 2.8034 -1.0990 -3.2344 7 6 3.4091 -0.8405 -4.5430 8 6 2.3300 -0.7830 -5.5934 9 8 1.1694 -0.9428 -5.2798 10 7 2.6548 -0.5551 -6.8814 11 6 1.6058 -0.4998 -7.9026 12 6 2.2384 -0.2297 -9.2694 13 1 3.0039 0.5455 -9.2356 14 6 2.6821 -1.5048 -10.0056 15 6 2.1523 -0.8513 -11.2930 16 1 2.8952 -0.2469 -11.8134 17 7 1.4533 -1.7844 -12.1800 18 6 1.4981 -1.7926 -13.5481 19 6 0.7162 -2.8097 -13.9575 20 7 0.2073 -3.4059 -12.8691 21 6 0.6489 -2.8005 -11.8006 22 6 1.2102 -0.0316 -10.3956 23 6 2.4939 -2.3457 -2.7384 24 6 2.6293 -3.6362 -3.2392 25 6 2.2152 -4.7107 -2.4827 26 6 1.6636 -4.5194 -1.2236 27 6 1.5212 -3.2600 -0.7122 28 6 1.9398 -2.1575 -1.4589 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5140 0.8899 31 1 1.5617 2.4678 1.2085 32 1 3.5346 1.7701 -0.0322 33 1 2.5977 0.9248 -2.4613 34 1 3.9406 0.1108 -4.5158 35 1 4.1087 -1.6407 -4.7841 36 1 3.5831 -0.4277 -7.1323 37 1 1.0743 -1.4511 -7.9294 38 1 0.9062 0.3006 -7.6619 39 1 3.7615 -1.6561 -10.0051 40 1 2.1286 -2.3955 -9.7084 41 1 2.0537 -1.1138 -14.1781 42 1 0.5306 -3.0947 -14.9825 43 1 0.4090 -3.0668 -10.7818 44 1 0.2543 -0.5195 -10.2051 45 1 1.1004 1.0067 -10.7088 46 1 3.0570 -3.7954 -4.2180 47 1 2.3208 -5.7120 -2.8734 48 1 1.3444 -5.3724 -0.6433 49 1 1.0907 -3.1188 0.2683 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567772_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:52:56 Heat of formation + Delta-G solvation = 99.511094 kcal Electronic energy + Delta-G solvation = -31874.256953 eV Core-core repulsion = 27577.895973 eV Total energy + Delta-G solvation = -4296.360979 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.09271 -42.51937 -40.80359 -39.77248 -38.10480 -37.61593 -35.75626 -34.09853 -33.43681 -31.55716 -30.39193 -30.23982 -29.67350 -28.07981 -26.83563 -25.74204 -24.45458 -23.69430 -22.67405 -22.48111 -21.88014 -21.59542 -20.67407 -20.17728 -18.86949 -18.43170 -18.08649 -17.71690 -17.28411 -16.88926 -16.63829 -16.41780 -16.27167 -16.05168 -15.92232 -15.38514 -15.35089 -15.21280 -14.89618 -14.79269 -14.71586 -14.47087 -14.45541 -14.30660 -14.04836 -13.66014 -13.60056 -13.37932 -13.21940 -13.00906 -12.72825 -12.57829 -12.23734 -12.12975 -12.10847 -11.81734 -11.78311 -11.61060 -11.09905 -10.95589 -10.55283 -10.47524 -10.30058 -10.14623 -9.46771 -9.16349 -8.62652 -4.99648 0.13496 0.62286 1.10067 1.37187 1.42343 1.51378 1.69404 1.71809 1.88149 2.00922 2.19965 2.25610 2.93362 3.29034 3.35900 3.58910 3.63875 3.65676 3.70019 3.70769 3.80196 3.82619 3.89202 3.99571 4.05413 4.13662 4.18431 4.21041 4.29822 4.30731 4.46095 4.47632 4.55326 4.60079 4.64688 4.71078 4.72479 4.73943 4.78190 4.82339 4.87897 4.94070 4.97252 5.12469 5.20304 5.35275 5.47909 5.49274 5.64770 5.72240 5.74695 5.82922 6.20089 6.24271 6.29218 6.51825 6.82535 7.13925 7.19061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.048 4.048 3 Si 0.797 3.203 4 C -0.227 4.227 5 C 0.081 3.919 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.490 3.510 9 O -0.572 6.572 10 N -0.709 5.709 11 C 0.133 3.867 12 C -0.098 4.098 13 H 0.134 0.866 14 C -0.137 4.137 15 C 0.101 3.899 16 H 0.148 0.852 17 N -0.444 5.444 18 C -0.047 4.047 19 C -0.068 4.068 20 N -0.544 5.544 21 C 0.173 3.827 22 C -0.138 4.138 23 C 0.091 3.909 24 C -0.133 4.133 25 C -0.110 4.110 26 C -0.155 4.155 27 C -0.092 4.092 28 C -0.119 4.119 29 H 0.390 0.610 30 H 0.091 0.909 31 H -0.302 1.302 32 H -0.273 1.273 33 H 0.210 0.790 34 H 0.167 0.833 35 H 0.141 0.859 36 H 0.422 0.578 37 H 0.052 0.948 38 H 0.061 0.939 39 H 0.099 0.901 40 H 0.083 0.917 41 H 0.204 0.796 42 H 0.173 0.827 43 H 0.215 0.785 44 H 0.079 0.921 45 H 0.094 0.906 46 H 0.134 0.866 47 H 0.145 0.855 48 H 0.134 0.866 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.421 7.793 -5.551 13.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.157 4.157 3 Si 0.701 3.299 4 C -0.234 4.234 5 C -0.044 4.044 6 N -0.149 5.149 7 C -0.038 4.038 8 C 0.276 3.724 9 O -0.451 6.451 10 N -0.363 5.363 11 C 0.009 3.991 12 C -0.117 4.117 13 H 0.152 0.848 14 C -0.175 4.175 15 C -0.001 4.001 16 H 0.166 0.834 17 N -0.126 5.126 18 C -0.180 4.180 19 C -0.214 4.214 20 N -0.263 5.263 21 C -0.110 4.110 22 C -0.176 4.176 23 C -0.015 4.015 24 C -0.153 4.153 25 C -0.129 4.129 26 C -0.174 4.174 27 C -0.110 4.110 28 C -0.123 4.123 29 H 0.240 0.760 30 H 0.108 0.892 31 H -0.230 1.230 32 H -0.200 1.200 33 H 0.227 0.773 34 H 0.184 0.816 35 H 0.159 0.841 36 H 0.260 0.740 37 H 0.071 0.929 38 H 0.080 0.920 39 H 0.118 0.882 40 H 0.101 0.899 41 H 0.221 0.779 42 H 0.191 0.809 43 H 0.231 0.769 44 H 0.098 0.902 45 H 0.112 0.888 46 H 0.152 0.848 47 H 0.162 0.838 48 H 0.152 0.848 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 8.849 7.460 -4.609 12.457 hybrid contribution 0.304 -0.495 0.173 0.606 sum 9.152 6.964 -4.436 12.326 Atomic orbital electron populations 1.86444 1.18356 1.82431 1.50004 1.24722 0.84369 1.11117 0.95497 0.93992 0.77433 0.73386 0.85124 1.20805 1.11654 0.91828 0.99126 1.22086 0.98921 0.95312 0.88091 1.43456 1.53185 1.03678 1.14561 1.22013 0.93863 1.09206 0.78694 1.21395 0.90341 0.76186 0.84517 1.90820 1.22363 1.50054 1.81816 1.45766 1.12037 1.72519 1.05943 1.21260 0.90218 1.01272 0.86333 1.22543 0.99143 0.98907 0.91099 0.84776 1.23540 1.03493 0.97779 0.92693 1.23440 0.96051 0.91186 0.89388 0.83435 1.45774 1.35634 1.24643 1.06566 1.23226 1.06625 1.04103 0.84061 1.22675 1.02170 0.97975 0.98612 1.70264 1.26518 1.30238 0.99296 1.25114 0.95972 0.89663 1.00238 1.23430 0.97870 1.01829 0.94502 1.18381 1.01821 0.87150 0.94109 1.20247 1.04907 0.89120 1.01022 1.21123 0.98349 0.99110 0.94287 1.20905 1.02408 0.96968 0.97090 1.20440 0.99165 0.91899 0.99536 1.19391 1.03795 0.93984 0.95116 0.76022 0.89195 1.23037 1.19959 0.77332 0.81551 0.84122 0.74030 0.92915 0.92038 0.88196 0.89870 0.77914 0.80934 0.76857 0.90221 0.88770 0.84779 0.83758 0.84784 0.86726 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.55 12.88 -148.98 -1.92 -5.47 16 2 C -0.05 -0.19 3.06 71.24 0.22 0.02 16 3 Si 0.80 -1.53 30.75 68.60 2.11 0.58 16 4 C -0.23 -1.19 5.58 -18.62 -0.10 -1.30 16 5 C 0.08 -0.05 9.89 83.00 0.82 0.77 16 6 N -0.47 -0.04 2.27 -519.99 -1.18 -1.22 16 7 C 0.09 -0.84 6.48 85.63 0.56 -0.29 16 8 C 0.49 -2.14 7.90 87.66 0.69 -1.45 16 9 O -0.57 -4.58 16.42 -3.03 -0.05 -4.63 16 10 N -0.71 8.18 5.56 -463.04 -2.57 5.61 16 11 C 0.13 -1.19 5.51 86.38 0.48 -0.72 16 12 C -0.10 1.44 3.75 -10.27 -0.04 1.40 16 13 H 0.13 -2.60 8.14 -2.38 -0.02 -2.62 16 14 C -0.14 1.76 7.18 31.12 0.22 1.99 16 15 C 0.10 -1.07 4.64 45.52 0.21 -0.86 16 16 H 0.15 -2.18 8.14 -2.38 -0.02 -2.20 16 17 N -0.44 1.03 2.94 -503.81 -1.48 -0.45 16 18 C -0.05 0.03 11.58 83.09 0.96 0.99 16 19 C -0.07 -0.39 11.87 83.52 0.99 0.60 16 20 N -0.54 -5.53 11.25 -200.31 -2.25 -7.79 16 21 C 0.17 0.51 11.38 180.26 2.05 2.56 16 22 C -0.14 1.53 7.32 31.12 0.23 1.75 16 23 C 0.09 0.61 6.80 39.03 0.27 0.88 16 24 C -0.13 -0.66 10.00 22.37 0.22 -0.44 16 25 C -0.11 -0.58 10.01 22.29 0.22 -0.35 16 26 C -0.15 -1.15 9.97 22.03 0.22 -0.93 16 27 C -0.09 -0.96 10.05 22.23 0.22 -0.74 16 28 C -0.12 -1.20 6.35 -20.20 -0.13 -1.33 16 29 H 0.39 -0.52 8.70 -74.05 -0.64 -1.16 16 30 H 0.09 0.60 7.96 -2.39 -0.02 0.58 16 31 H -0.30 -1.81 7.11 99.48 0.71 -1.10 16 32 H -0.27 -0.28 7.11 99.48 0.71 0.43 16 33 H 0.21 -2.07 6.34 -2.91 -0.02 -2.09 16 34 H 0.17 -3.08 8.12 -2.39 -0.02 -3.10 16 35 H 0.14 -2.00 8.14 -2.39 -0.02 -2.02 16 36 H 0.42 -8.12 8.47 -92.71 -0.79 -8.90 16 37 H 0.05 -0.23 7.84 -2.39 -0.02 -0.25 16 38 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 39 H 0.10 -1.52 8.14 -2.39 -0.02 -1.54 16 40 H 0.08 -0.80 6.66 -2.39 -0.02 -0.81 16 41 H 0.20 -1.57 8.06 -2.91 -0.02 -1.60 16 42 H 0.17 0.48 8.06 -2.91 -0.02 0.45 16 43 H 0.22 -0.45 7.42 -2.91 -0.02 -0.48 16 44 H 0.08 -0.57 7.87 -2.39 -0.02 -0.59 16 45 H 0.09 -1.15 8.14 -2.39 -0.02 -1.17 16 46 H 0.13 -0.04 8.06 -2.91 -0.02 -0.06 16 47 H 0.14 0.03 8.06 -2.91 -0.02 0.00 16 48 H 0.13 0.48 8.06 -2.91 -0.02 0.45 16 49 H 0.11 1.14 8.06 -2.91 -0.02 1.12 16 Total: 0.00 -38.37 412.22 0.56 -37.81 By element: Atomic # 1 Polarization: -26.60 SS G_CDS: -0.41 Total: -27.00 kcal Atomic # 6 Polarization: -5.75 SS G_CDS: 8.31 Total: 2.56 kcal Atomic # 7 Polarization: 3.64 SS G_CDS: -7.49 Total: -3.85 kcal Atomic # 8 Polarization: -8.14 SS G_CDS: -1.97 Total: -10.11 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: 2.11 Total: 0.58 kcal Total: -38.37 0.56 -37.81 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567772_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.322 kcal (2) G-P(sol) polarization free energy of solvation -38.373 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.949 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.811 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds