Wall clock time and date at job start Sun Mar 7 2021 07:53:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.42905 * 109.46585 * 2 1 4 4 C 1.35905 * 116.99601 * 84.91932 * 3 2 1 5 5 C 1.38735 * 120.05028 * 174.25390 * 4 3 2 6 6 C 1.38146 * 119.93770 * 179.70021 * 5 4 3 7 7 C 1.38264 * 120.05835 * 0.59638 * 6 5 4 8 8 C 1.50698 * 119.94640 * 179.70123 * 7 6 5 9 9 O 1.42898 * 109.47028 * 119.97238 * 8 7 6 10 10 Si 1.86308 * 109.47067 * 359.97438 * 8 7 6 11 11 C 1.38264 * 120.10959 * 359.67395 * 7 6 5 12 12 C 1.38141 * 120.05906 * 0.02943 * 11 7 6 13 13 C 1.50699 * 109.46969 * 240.00605 * 2 1 3 14 14 O 1.21277 * 120.00281 * 120.00069 * 13 2 1 15 15 N 1.34778 * 119.99924 * 299.99126 * 13 2 1 16 16 C 1.46495 * 120.00263 * 180.02562 * 15 13 2 17 17 H 1.09001 * 109.46930 * 35.00368 * 16 15 13 18 18 C 1.53001 * 109.47377 * 155.00085 * 16 15 13 19 19 C 1.52999 * 109.47206 * 179.97438 * 18 16 15 20 20 C 1.52998 * 109.47459 * 300.00533 * 19 18 16 21 21 H 1.09001 * 109.46909 * 299.99868 * 20 19 18 22 22 N 1.46495 * 109.47311 * 180.02562 * 20 19 18 23 23 C 1.34779 * 120.00069 * 154.99831 * 22 20 19 24 24 N 1.34783 * 119.99655 * 179.97438 * 23 22 20 25 25 O 1.21583 * 120.00030 * 0.02562 * 23 22 20 26 26 C 1.53001 * 109.47347 * 59.99553 * 20 19 18 27 27 C 1.52998 * 109.47311 * 275.00631 * 16 15 13 28 28 H 1.09003 * 109.46686 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47208 * 299.99735 * 1 2 3 30 30 H 1.09000 * 109.47081 * 59.99935 * 1 2 3 31 31 H 1.08993 * 109.47390 * 119.99786 * 2 1 3 32 32 H 1.08003 * 120.03162 * 359.97438 * 5 4 3 33 33 H 1.08005 * 119.96891 * 180.31230 * 6 5 4 34 34 H 1.08989 * 109.47545 * 239.97621 * 8 7 6 35 35 H 0.96697 * 114.00695 * 300.00016 * 9 8 7 36 36 H 1.48497 * 110.00126 * 180.02562 * 10 8 7 37 37 H 1.48501 * 109.99502 * 301.31890 * 10 8 7 38 38 H 1.08000 * 119.96845 * 180.02562 * 11 7 6 39 39 H 1.07995 * 120.03551 * 180.02562 * 12 11 7 40 40 H 0.97006 * 119.99709 * 0.02562 * 15 13 2 41 41 H 1.09001 * 109.46859 * 60.00240 * 18 16 15 42 42 H 1.08991 * 109.47045 * 300.00254 * 18 16 15 43 43 H 1.08994 * 109.46974 * 180.02562 * 19 18 16 44 44 H 1.09001 * 109.46953 * 60.00374 * 19 18 16 45 45 H 0.97006 * 119.99866 * 334.99466 * 22 20 19 46 46 H 0.96997 * 119.99575 * 179.97438 * 24 23 22 47 47 H 0.96999 * 119.99906 * 359.72770 * 24 23 22 48 48 H 1.09001 * 109.46859 * 60.00284 * 26 20 19 49 49 H 1.09004 * 109.47312 * 179.97438 * 26 20 19 50 50 H 1.09001 * 109.46909 * 299.99750 * 27 16 15 51 51 H 1.08999 * 109.47388 * 59.99211 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0062 1.3474 0.0000 4 6 2.1107 1.9647 1.2062 5 6 2.6771 3.2282 1.2932 6 6 2.7765 3.8562 2.5196 7 6 2.3234 3.2216 3.6614 8 6 2.4392 3.9062 4.9989 9 8 1.1374 4.0672 5.5659 10 14 3.2298 5.5783 4.7743 11 6 1.7636 1.9601 3.5780 12 6 1.6563 1.3303 2.3532 13 6 2.0323 -0.7103 -1.2305 14 8 2.7296 -0.1209 -2.0288 15 7 1.7068 -2.0006 -1.4438 16 6 2.1955 -2.6914 -2.6397 17 1 3.1949 -2.3313 -2.8844 18 6 2.2469 -4.1972 -2.3738 19 6 2.7567 -4.9186 -3.6231 20 6 1.8127 -4.6394 -4.7943 21 1 0.8134 -4.9993 -4.5492 22 7 2.3005 -5.3306 -5.9902 23 6 1.4411 -5.6643 -6.9734 24 7 1.8901 -6.2998 -8.0739 25 8 0.2611 -5.3912 -6.8679 26 6 1.7613 -3.1335 -5.0602 27 6 1.2520 -2.4122 -3.8113 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 1.8934 -0.5138 0.8899 32 1 3.0360 3.7222 0.4023 33 1 3.2128 4.8419 2.5873 34 1 3.0533 3.3006 5.6651 35 1 0.5356 4.5970 5.0254 36 1 3.3503 6.2635 6.0862 37 1 4.5713 5.4266 4.1558 38 1 1.4100 1.4667 4.4713 39 1 1.2187 0.3451 2.2885 40 1 1.1489 -2.4720 -0.8054 41 1 1.2476 -4.5572 -2.1292 42 1 2.9191 -4.3960 -1.5393 43 1 2.7929 -5.9913 -3.4338 44 1 3.7560 -4.5586 -3.8681 45 1 3.2421 -5.5481 -6.0746 46 1 1.2716 -6.5403 -8.7813 47 1 2.8324 -6.5135 -8.1601 48 1 2.7606 -2.7736 -5.3052 49 1 1.0891 -2.9347 -5.8949 50 1 0.2526 -2.7722 -3.5667 51 1 1.2153 -1.3394 -4.0007 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567774_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:53:04 Heat of formation + Delta-G solvation = -118.788272 kcal Electronic energy + Delta-G solvation = -32398.070593 eV Core-core repulsion = 27877.671913 eV Total energy + Delta-G solvation = -4520.398680 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.86769 -41.24023 -40.67968 -39.39963 -38.72561 -37.14451 -36.07307 -34.87920 -34.02010 -32.84787 -32.05591 -31.86469 -31.38896 -29.15859 -26.68715 -25.50794 -24.26459 -23.93224 -23.46095 -22.35921 -21.86990 -21.48225 -21.05918 -19.50480 -19.22469 -18.57100 -18.27918 -18.17971 -17.37663 -16.88882 -16.76548 -16.42588 -16.25653 -16.21461 -15.93749 -15.72103 -15.70024 -15.40655 -15.17301 -15.06078 -14.80155 -14.70141 -14.33194 -14.27397 -14.11176 -13.72435 -13.50472 -13.38853 -13.34156 -13.24753 -12.87425 -12.72666 -12.47406 -12.24468 -12.17358 -12.11284 -12.00791 -11.68209 -11.54762 -11.51721 -11.45231 -10.90052 -10.72473 -10.41237 -10.19426 -10.04583 -9.96534 -9.21567 -4.99512 0.24531 0.32476 1.33728 1.38875 1.51753 1.63318 1.95006 1.96359 2.16063 2.49404 2.65638 3.42967 3.56710 3.59469 3.62818 3.65416 3.68351 3.72854 3.82282 3.86909 3.93018 3.97681 4.09730 4.15646 4.27544 4.34105 4.36139 4.37054 4.43275 4.53027 4.56833 4.63233 4.66708 4.69269 4.72002 4.93620 4.99338 5.05423 5.08953 5.09839 5.11229 5.18699 5.23882 5.27283 5.29088 5.43293 5.48315 5.55530 5.67995 5.89456 6.03009 6.26489 6.45615 6.79691 7.09575 7.10315 7.65118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.064 3.936 3 O -0.312 6.312 4 C 0.120 3.880 5 C -0.160 4.160 6 C -0.077 4.077 7 C -0.161 4.161 8 C -0.063 4.063 9 O -0.555 6.555 10 Si 0.766 3.234 11 C -0.056 4.056 12 C -0.207 4.207 13 C 0.516 3.484 14 O -0.568 6.568 15 N -0.704 5.704 16 C 0.148 3.852 17 H 0.073 0.927 18 C -0.115 4.115 19 C -0.115 4.115 20 C 0.164 3.836 21 H 0.073 0.927 22 N -0.730 5.730 23 C 0.696 3.304 24 N -0.852 5.852 25 O -0.648 6.648 26 C -0.122 4.122 27 C -0.121 4.121 28 H 0.109 0.891 29 H 0.086 0.914 30 H 0.058 0.942 31 H 0.126 0.874 32 H 0.134 0.866 33 H 0.147 0.853 34 H 0.108 0.892 35 H 0.395 0.605 36 H -0.299 1.299 37 H -0.289 1.289 38 H 0.139 0.861 39 H 0.154 0.846 40 H 0.420 0.580 41 H 0.087 0.913 42 H 0.093 0.907 43 H 0.092 0.908 44 H 0.081 0.919 45 H 0.413 0.587 46 H 0.418 0.582 47 H 0.414 0.586 48 H 0.067 0.933 49 H 0.045 0.955 50 H 0.074 0.926 51 H 0.045 0.955 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.846 -5.577 1.655 5.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.005 3.995 3 O -0.226 6.226 4 C 0.074 3.926 5 C -0.178 4.178 6 C -0.095 4.095 7 C -0.162 4.162 8 C -0.174 4.174 9 O -0.363 6.363 10 Si 0.673 3.327 11 C -0.074 4.074 12 C -0.225 4.225 13 C 0.302 3.698 14 O -0.446 6.446 15 N -0.358 5.358 16 C 0.044 3.956 17 H 0.091 0.909 18 C -0.153 4.153 19 C -0.153 4.153 20 C 0.058 3.942 21 H 0.091 0.909 22 N -0.386 5.386 23 C 0.394 3.606 24 N -0.421 5.421 25 O -0.530 6.530 26 C -0.161 4.161 27 C -0.160 4.160 28 H 0.128 0.872 29 H 0.104 0.896 30 H 0.078 0.922 31 H 0.143 0.857 32 H 0.152 0.848 33 H 0.164 0.836 34 H 0.125 0.875 35 H 0.245 0.755 36 H -0.227 1.227 37 H -0.216 1.216 38 H 0.157 0.843 39 H 0.172 0.828 40 H 0.258 0.742 41 H 0.106 0.894 42 H 0.112 0.888 43 H 0.110 0.890 44 H 0.100 0.900 45 H 0.249 0.751 46 H 0.251 0.749 47 H 0.245 0.755 48 H 0.086 0.914 49 H 0.064 0.936 50 H 0.093 0.907 51 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges 1.387 -4.658 1.789 5.179 hybrid contribution 0.421 -0.856 -0.358 1.019 sum 1.808 -5.514 1.431 5.977 Atomic orbital electron populations 1.22374 0.90580 1.05688 1.04336 1.22421 0.97096 0.82173 0.97852 1.86190 1.81472 1.26989 1.27917 1.19272 0.95839 0.93172 0.84274 1.20587 1.03825 0.94191 0.99236 1.20972 0.97883 0.99603 0.91001 1.20337 1.03670 0.96763 0.95394 1.24988 0.90392 1.09055 0.92943 1.86453 1.22979 1.76767 1.50119 0.93786 0.80692 0.77834 0.80347 1.20980 0.95367 0.93636 0.97466 1.21521 1.06541 1.02613 0.91869 1.20522 0.79692 0.82658 0.86916 1.90749 1.39004 1.66798 1.48027 1.45794 1.53575 1.10603 1.25791 1.21029 0.97632 0.93161 0.83821 0.90920 1.21721 1.04045 0.90995 0.98539 1.21709 0.98967 1.02180 0.92473 1.20851 0.98967 0.90466 0.83906 0.90921 1.45040 1.11396 1.62923 1.19213 1.16295 0.84673 0.78367 0.81267 1.42873 1.14594 1.64101 1.20501 1.90949 1.17770 1.62823 1.81432 1.21805 1.01466 0.95544 0.97294 1.21782 0.99934 0.99701 0.94578 0.87250 0.89562 0.92245 0.85669 0.84786 0.83550 0.87467 0.75509 1.22715 1.21600 0.84277 0.82808 0.74240 0.89430 0.88822 0.88977 0.89997 0.75068 0.74932 0.75524 0.91428 0.93615 0.90744 0.93579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.98 9.07 71.98 0.65 1.64 16 2 C 0.06 -0.06 2.65 29.85 0.08 0.02 16 3 O -0.31 -2.10 9.33 -73.44 -0.69 -2.79 16 4 C 0.12 0.47 6.60 22.51 0.15 0.62 16 5 C -0.16 -0.58 9.99 22.37 0.22 -0.36 16 6 C -0.08 -0.04 8.66 22.25 0.19 0.16 16 7 C -0.16 -0.02 5.39 -19.85 -0.11 -0.13 16 8 C -0.06 0.05 2.82 71.24 0.20 0.25 16 9 O -0.56 0.26 12.77 -148.98 -1.90 -1.65 16 10 Si 0.77 -1.16 29.78 68.60 2.04 0.88 16 11 C -0.06 0.02 9.60 22.25 0.21 0.23 16 12 C -0.21 0.14 8.24 22.36 0.18 0.32 16 13 C 0.52 1.80 7.20 87.66 0.63 2.43 16 14 O -0.57 -8.27 16.16 16.02 0.26 -8.02 16 15 N -0.70 2.98 4.97 -442.55 -2.20 0.78 16 16 C 0.15 -0.40 2.45 44.99 0.11 -0.29 16 17 H 0.07 0.14 7.58 -2.39 -0.02 0.12 16 18 C -0.11 1.00 5.39 30.59 0.16 1.17 16 19 C -0.11 0.93 5.39 30.59 0.16 1.09 16 20 C 0.16 -0.29 2.45 44.99 0.11 -0.18 16 21 H 0.07 0.19 7.58 -2.39 -0.02 0.17 16 22 N -0.73 1.93 5.08 -457.82 -2.33 -0.40 16 23 C 0.70 2.72 8.80 179.05 1.58 4.30 16 24 N -0.85 3.63 8.88 -184.74 -1.64 1.99 16 25 O -0.65 -9.65 16.84 -3.98 -0.07 -9.72 16 26 C -0.12 -0.20 5.49 30.58 0.17 -0.03 16 27 C -0.12 -0.11 5.49 30.58 0.17 0.06 16 28 H 0.11 -1.31 7.56 -2.39 -0.02 -1.33 16 29 H 0.09 -0.57 6.90 -2.39 -0.02 -0.59 16 30 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.13 -0.83 6.32 -2.39 -0.02 -0.84 16 32 H 0.13 0.43 8.06 -2.91 -0.02 0.41 16 33 H 0.15 -0.50 4.87 -2.91 -0.01 -0.51 16 34 H 0.11 0.01 7.96 -2.39 -0.02 0.00 16 35 H 0.39 -3.22 8.70 -74.06 -0.64 -3.87 16 36 H -0.30 -1.76 7.11 99.48 0.71 -1.05 16 37 H -0.29 -1.05 7.11 99.48 0.71 -0.34 16 38 H 0.14 -0.35 8.06 -2.91 -0.02 -0.38 16 39 H 0.15 -0.97 5.43 -2.91 -0.02 -0.98 16 40 H 0.42 -4.90 8.02 -92.70 -0.74 -5.64 16 41 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 42 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 43 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 44 H 0.08 -0.74 8.14 -2.39 -0.02 -0.76 16 45 H 0.41 -3.82 8.62 -92.70 -0.80 -4.62 16 46 H 0.42 -1.93 8.93 -92.71 -0.83 -2.76 16 47 H 0.41 -4.67 8.84 -92.71 -0.82 -5.49 16 48 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 49 H 0.04 0.34 8.14 -2.39 -0.02 0.32 16 50 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 51 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 Total: 0.00 -34.06 410.42 -4.41 -38.47 By element: Atomic # 1 Polarization: -28.08 SS G_CDS: -2.78 Total: -30.85 kcal Atomic # 6 Polarization: 6.41 SS G_CDS: 4.88 Total: 11.29 kcal Atomic # 7 Polarization: 8.54 SS G_CDS: -6.17 Total: 2.37 kcal Atomic # 8 Polarization: -19.77 SS G_CDS: -2.40 Total: -22.17 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: 2.04 Total: 0.88 kcal Total: -34.06 -4.41 -38.47 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.314 kcal (2) G-P(sol) polarization free energy of solvation -34.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds