Wall clock time and date at job start Sun Mar 7 2021 07:54:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21593 * 119.99971 * 2 1 4 4 N 1.34780 * 120.00052 * 180.02562 * 2 1 3 5 5 C 1.46492 * 119.99930 * 179.97438 * 4 2 1 6 6 H 1.09002 * 109.47696 * 34.99761 * 5 4 2 7 7 C 1.53002 * 109.47204 * 155.00105 * 5 4 2 8 8 C 1.53000 * 109.47233 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47060 * 299.99657 * 8 7 5 10 10 H 1.09002 * 109.47153 * 300.00319 * 9 8 7 11 11 N 1.46500 * 109.47473 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00270 * 154.99797 * 11 9 8 13 13 O 1.21577 * 119.99924 * 0.02562 * 12 11 9 14 14 C 1.47725 * 120.00284 * 180.02562 * 12 11 9 15 15 C 1.39629 * 120.11447 * 359.97438 * 14 12 11 16 16 C 1.37855 * 119.87963 * 179.97438 * 15 14 12 17 17 C 1.38634 * 120.11852 * 0.02562 * 16 15 14 18 18 F 1.35098 * 119.88457 * 179.97438 * 17 16 15 19 19 C 1.38677 * 120.23712 * 359.97014 * 17 16 15 20 20 C 1.50702 * 119.94082 * 180.02562 * 19 17 16 21 21 O 1.42891 * 109.47039 * 74.99890 * 20 19 17 22 22 Si 1.86304 * 109.46894 * 314.99858 * 20 19 17 23 23 C 1.37821 * 120.11744 * 359.79453 * 19 17 16 24 24 C 1.52999 * 109.47317 * 59.99960 * 9 8 7 25 25 C 1.52997 * 109.47244 * 274.99857 * 5 4 2 26 26 H 0.96997 * 119.99401 * 179.97438 * 1 2 3 27 27 H 0.96996 * 120.00069 * 359.97438 * 1 2 3 28 28 H 0.96998 * 119.99716 * 359.97438 * 4 2 1 29 29 H 1.08992 * 109.47063 * 59.99836 * 7 5 4 30 30 H 1.09004 * 109.46733 * 299.99549 * 7 5 4 31 31 H 1.09002 * 109.47398 * 59.99826 * 8 7 5 32 32 H 1.09001 * 109.47194 * 180.02562 * 8 7 5 33 33 H 0.97000 * 119.99491 * 335.00093 * 11 9 8 34 34 H 1.08002 * 120.06247 * 359.96462 * 15 14 12 35 35 H 1.07996 * 119.94212 * 179.97438 * 16 15 14 36 36 H 1.09006 * 109.47206 * 195.00536 * 20 19 17 37 37 H 0.96691 * 114.00545 * 299.99948 * 21 20 19 38 38 H 1.48500 * 109.99866 * 180.02562 * 22 20 19 39 39 H 1.48499 * 110.00541 * 301.32104 * 22 20 19 40 40 H 1.08002 * 120.05701 * 180.25813 * 23 19 17 41 41 H 1.09000 * 109.47486 * 180.02562 * 24 9 8 42 42 H 1.09002 * 109.46716 * 60.00091 * 24 9 8 43 43 H 1.09002 * 109.47153 * 300.00242 * 25 5 4 44 44 H 1.09001 * 109.47289 * 60.00326 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9558 1.0530 0.0000 4 7 2.0217 -1.1672 -0.0005 5 6 3.4866 -1.1672 -0.0011 6 1 3.8503 -0.3255 0.5884 7 6 3.9969 -2.4747 0.6080 8 6 5.5269 -2.4744 0.6080 9 6 6.0369 -2.3481 -0.8289 10 1 5.6737 -3.1898 -1.4187 11 7 7.5019 -2.3484 -0.8291 12 6 8.1756 -2.7473 -1.9261 13 8 7.5676 -3.1064 -2.9158 14 6 9.6529 -2.7481 -1.9261 15 6 10.3536 -2.3357 -0.7910 16 6 11.7322 -2.3389 -0.7961 17 6 12.4227 -2.7502 -1.9257 18 9 13.7737 -2.7510 -1.9257 19 6 11.7316 -3.1609 -3.0557 20 6 12.4890 -3.6072 -4.2798 21 8 13.0287 -4.9113 -4.0567 22 14 13.8759 -2.4113 -4.6221 23 6 10.3534 -3.1661 -3.0596 24 6 5.5266 -1.0407 -1.4382 25 6 3.9961 -1.0412 -1.4382 26 1 -0.4849 -0.8401 -0.0004 27 1 -0.4850 0.8400 0.0004 28 1 1.5367 -2.0072 -0.0005 29 1 3.6334 -3.3163 0.0186 30 1 3.6340 -2.5644 1.6320 31 1 5.8902 -1.6327 1.1978 32 1 5.8905 -3.4061 1.0416 33 1 7.9870 -2.0616 -0.0396 34 1 9.8167 -2.0146 0.0893 35 1 12.2752 -2.0197 0.0811 36 1 11.8136 -3.6347 -5.1350 37 1 13.6398 -4.9616 -3.3091 38 1 14.6302 -2.8399 -5.8273 39 1 13.3303 -1.0450 -4.8243 40 1 9.8162 -3.4901 -3.9388 41 1 5.8895 -0.9509 -2.4620 42 1 5.8899 -0.1990 -0.8484 43 1 3.6325 -1.8829 -2.0277 44 1 3.6326 -0.1097 -1.8722 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567774_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:54:20 Heat of formation + Delta-G solvation = -127.749619 kcal Electronic energy + Delta-G solvation = -28875.214029 eV Core-core repulsion = 24514.730210 eV Total energy + Delta-G solvation = -4360.483819 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.147 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -50.35183 -41.63611 -41.04845 -39.95523 -38.89749 -37.69581 -36.09361 -34.85828 -33.81011 -32.78000 -31.92732 -31.84644 -29.19893 -26.99273 -25.21939 -23.93186 -23.56209 -23.26284 -21.88621 -21.52158 -21.11648 -19.37740 -19.03232 -18.62598 -18.32270 -18.02466 -17.85023 -17.04152 -16.99353 -16.44829 -16.30226 -16.17517 -16.02820 -15.67033 -15.49605 -15.24515 -15.06239 -15.05060 -14.81084 -14.46516 -14.22864 -14.13407 -13.94665 -13.64985 -13.37599 -13.23244 -12.93343 -12.72695 -12.50012 -12.45109 -12.17060 -11.99322 -11.55877 -11.50973 -11.45410 -11.18186 -10.72501 -10.69232 -10.25908 -10.12359 -9.96639 -9.83622 -4.93483 -0.51876 -0.00031 1.14375 1.49214 1.60509 1.83707 1.89448 2.06762 2.16225 2.55012 2.92887 3.25852 3.49659 3.53599 3.58895 3.62101 3.64373 3.68496 3.94319 3.99036 4.07643 4.10956 4.16431 4.26504 4.36680 4.37753 4.43593 4.61571 4.67824 4.72582 4.74979 4.88547 4.93508 4.99066 5.05686 5.07707 5.10252 5.12322 5.25364 5.28234 5.44235 5.56008 5.60399 5.89654 6.03055 6.43698 6.57370 7.09863 7.10374 7.65283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.852 5.852 2 C 0.696 3.304 3 O -0.648 6.648 4 N -0.729 5.729 5 C 0.163 3.837 6 H 0.072 0.928 7 C -0.114 4.114 8 C -0.115 4.115 9 C 0.147 3.853 10 H 0.075 0.925 11 N -0.705 5.705 12 C 0.558 3.442 13 O -0.579 6.579 14 C -0.156 4.156 15 C -0.041 4.041 16 C -0.141 4.141 17 C 0.121 3.879 18 F -0.100 7.100 19 C -0.166 4.166 20 C -0.073 4.073 21 O -0.549 6.549 22 Si 0.747 3.253 23 C -0.033 4.033 24 C -0.121 4.121 25 C -0.122 4.122 26 H 0.414 0.586 27 H 0.418 0.582 28 H 0.413 0.587 29 H 0.082 0.918 30 H 0.092 0.908 31 H 0.087 0.913 32 H 0.094 0.906 33 H 0.417 0.583 34 H 0.177 0.823 35 H 0.183 0.817 36 H 0.111 0.889 37 H 0.393 0.607 38 H -0.287 1.287 39 H -0.287 1.287 40 H 0.128 0.872 41 H 0.045 0.955 42 H 0.073 0.927 43 H 0.068 0.932 44 H 0.044 0.956 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.965 -2.681 9.506 9.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.421 5.421 2 C 0.394 3.606 3 O -0.530 6.530 4 N -0.385 5.385 5 C 0.058 3.942 6 H 0.091 0.909 7 C -0.153 4.153 8 C -0.154 4.154 9 C 0.042 3.958 10 H 0.093 0.907 11 N -0.357 5.357 12 C 0.347 3.653 13 O -0.460 6.460 14 C -0.159 4.159 15 C -0.060 4.060 16 C -0.159 4.159 17 C 0.101 3.899 18 F -0.078 7.078 19 C -0.167 4.167 20 C -0.183 4.183 21 O -0.357 6.357 22 Si 0.651 3.349 23 C -0.052 4.052 24 C -0.160 4.160 25 C -0.161 4.161 26 H 0.245 0.755 27 H 0.251 0.749 28 H 0.249 0.751 29 H 0.101 0.899 30 H 0.110 0.890 31 H 0.106 0.894 32 H 0.113 0.887 33 H 0.256 0.744 34 H 0.194 0.806 35 H 0.200 0.800 36 H 0.128 0.872 37 H 0.242 0.758 38 H -0.214 1.214 39 H -0.213 1.213 40 H 0.146 0.854 41 H 0.064 0.936 42 H 0.091 0.909 43 H 0.087 0.913 44 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges -0.751 -1.747 7.772 8.002 hybrid contribution -1.031 -0.273 -0.619 1.233 sum -1.783 -2.020 7.154 7.644 Atomic orbital electron populations 1.42872 1.04289 1.13822 1.81088 1.16301 0.82969 0.84180 0.77167 1.90952 1.69133 1.32493 1.60428 1.45035 1.07161 1.07092 1.79245 1.20855 0.78100 0.99709 0.95546 0.90944 1.21708 0.95208 0.95694 1.02686 1.21730 0.95096 1.04786 0.93747 1.21047 0.78633 0.97604 0.98482 0.90708 1.45826 1.07395 1.66378 1.16058 1.18407 0.87451 0.76456 0.83020 1.90797 1.70652 1.49591 1.34919 1.20003 0.92599 1.06696 0.96622 1.21576 0.93685 0.93596 0.97105 1.21480 0.94671 1.01456 0.98323 1.17894 0.77033 0.99811 0.95133 1.91190 1.28320 1.93894 1.94405 1.20276 0.94692 1.05020 0.96756 1.25045 1.03955 0.92717 0.96604 1.86517 1.65453 1.27757 1.55936 0.93903 0.81825 0.74261 0.84869 1.20993 0.92288 0.93883 0.98079 1.21807 0.95112 0.98302 1.00814 1.21826 0.95066 1.01623 0.97593 0.75523 0.74949 0.75057 0.89944 0.88958 0.89434 0.88723 0.74423 0.80555 0.79978 0.87151 0.75755 1.21421 1.21337 0.85378 0.93591 0.90874 0.91337 0.93689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 3.68 8.88 -184.73 -1.64 2.04 16 2 C 0.70 2.67 8.80 179.05 1.58 4.24 16 3 O -0.65 -9.63 16.84 -4.01 -0.07 -9.70 16 4 N -0.73 2.04 5.08 -457.81 -2.33 -0.28 16 5 C 0.16 -0.31 2.45 44.99 0.11 -0.20 16 6 H 0.07 0.18 7.58 -2.39 -0.02 0.16 16 7 C -0.11 0.95 5.39 30.60 0.16 1.12 16 8 C -0.12 1.03 5.39 30.59 0.16 1.20 16 9 C 0.15 -0.41 2.45 44.99 0.11 -0.30 16 10 H 0.07 0.11 7.58 -2.39 -0.02 0.10 16 11 N -0.70 2.71 5.03 -445.51 -2.24 0.47 16 12 C 0.56 2.05 7.73 86.75 0.67 2.72 16 13 O -0.58 -7.61 16.01 -3.96 -0.06 -7.67 16 14 C -0.16 -0.04 5.87 -20.09 -0.12 -0.16 16 15 C -0.04 0.31 9.54 22.51 0.21 0.53 16 16 C -0.14 1.11 10.01 22.27 0.22 1.33 16 17 C 0.12 -0.40 6.63 22.47 0.15 -0.25 16 18 F -0.10 0.51 13.46 44.97 0.61 1.12 16 19 C -0.17 -0.20 4.78 -19.86 -0.09 -0.29 16 20 C -0.07 -0.18 2.80 71.24 0.20 0.02 16 21 O -0.55 -1.67 12.88 -148.98 -1.92 -3.59 16 22 Si 0.75 1.45 29.57 68.60 2.03 3.48 16 23 C -0.03 -0.12 9.21 22.51 0.21 0.08 16 24 C -0.12 -0.11 5.50 30.61 0.17 0.05 16 25 C -0.12 -0.18 5.50 30.61 0.17 -0.02 16 26 H 0.41 -4.70 8.84 -92.71 -0.82 -5.52 16 27 H 0.42 -1.94 8.93 -92.71 -0.83 -2.77 16 28 H 0.41 -3.90 8.62 -92.71 -0.80 -4.70 16 29 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 30 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 31 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 32 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 33 H 0.42 -4.69 6.63 -92.71 -0.61 -5.31 16 34 H 0.18 -2.77 6.40 -2.91 -0.02 -2.78 16 35 H 0.18 -2.57 8.06 -2.91 -0.02 -2.60 16 36 H 0.11 0.42 7.77 -2.38 -0.02 0.40 16 37 H 0.39 -1.91 8.41 -74.06 -0.62 -2.54 16 38 H -0.29 -2.39 7.11 99.48 0.71 -1.69 16 39 H -0.29 -2.11 7.11 99.48 0.71 -1.40 16 40 H 0.13 0.86 7.59 -2.91 -0.02 0.84 16 41 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 42 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 43 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 44 H 0.04 0.34 8.14 -2.39 -0.02 0.32 16 Total: 0.00 -30.80 365.55 -4.25 -35.05 By element: Atomic # 1 Polarization: -28.43 SS G_CDS: -2.54 Total: -30.98 kcal Atomic # 6 Polarization: 6.16 SS G_CDS: 3.92 Total: 10.07 kcal Atomic # 7 Polarization: 8.43 SS G_CDS: -6.21 Total: 2.22 kcal Atomic # 8 Polarization: -18.91 SS G_CDS: -2.05 Total: -20.96 kcal Atomic # 9 Polarization: 0.51 SS G_CDS: 0.61 Total: 1.12 kcal Atomic # 14 Polarization: 1.45 SS G_CDS: 2.03 Total: 3.48 kcal Total: -30.80 -4.25 -35.05 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.703 kcal (2) G-P(sol) polarization free energy of solvation -30.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.498 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.047 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.750 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds