Wall clock time and date at job start Sun Mar 7 2021 07:55:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21589 * 119.99832 * 2 1 4 4 N 1.34772 * 120.00290 * 180.02562 * 2 1 3 5 5 C 1.46504 * 120.00257 * 179.97438 * 4 2 1 6 6 H 1.09007 * 109.46604 * 324.99495 * 5 4 2 7 7 C 1.53000 * 109.47362 * 84.99690 * 5 4 2 8 8 C 1.52995 * 109.47186 * 180.02562 * 7 5 4 9 9 C 1.53008 * 109.46949 * 299.99705 * 8 7 5 10 10 H 1.08995 * 109.46750 * 300.00442 * 9 8 7 11 11 N 1.46496 * 109.46938 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99797 * 85.00599 * 11 9 8 13 13 O 1.21577 * 120.00070 * 359.97438 * 12 11 9 14 14 C 1.47653 * 120.00286 * 180.02562 * 12 11 9 15 15 C 1.40175 * 119.97259 * 359.97438 * 14 12 11 16 16 C 1.36344 * 120.66891 * 180.02562 * 15 14 12 17 17 C 1.39328 * 120.23836 * 359.97438 * 16 15 14 18 18 N 1.37405 * 133.24937 * 180.02562 * 17 16 15 19 19 C 1.36869 * 109.97590 * 179.97438 * 18 17 16 20 20 C 1.34179 * 109.97026 * 0.02562 * 19 18 17 21 21 C 1.50708 * 126.54320 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.46652 * 254.99532 * 21 20 19 23 23 Si 1.86303 * 109.46784 * 14.99338 * 21 20 19 24 24 C 1.40901 * 119.64053 * 359.97438 * 17 16 15 25 25 C 1.39181 * 119.97582 * 179.97438 * 14 12 11 26 26 C 1.52997 * 109.46616 * 60.00277 * 9 8 7 27 27 C 1.52997 * 109.47134 * 205.00221 * 5 4 2 28 28 H 0.97001 * 119.99227 * 180.02562 * 1 2 3 29 29 H 0.96991 * 120.00309 * 359.97438 * 1 2 3 30 30 H 0.97005 * 119.99960 * 359.97438 * 4 2 1 31 31 H 1.09007 * 109.46928 * 300.00212 * 7 5 4 32 32 H 1.09000 * 109.46834 * 60.00000 * 7 5 4 33 33 H 1.09000 * 109.46966 * 180.02562 * 8 7 5 34 34 H 1.09000 * 109.47658 * 59.99985 * 8 7 5 35 35 H 0.96996 * 120.00459 * 265.00010 * 11 9 8 36 36 H 1.08001 * 119.66260 * 0.02562 * 15 14 12 37 37 H 1.08006 * 119.88200 * 179.97438 * 16 15 14 38 38 H 0.96993 * 125.01167 * 359.72912 * 18 17 16 39 39 H 1.08007 * 125.01393 * 179.97438 * 19 18 17 40 40 H 1.09000 * 109.47359 * 134.99488 * 21 20 19 41 41 H 0.96702 * 114.00035 * 59.99717 * 22 21 20 42 42 H 1.48502 * 109.99649 * 180.02562 * 23 21 20 43 43 H 1.48502 * 109.99859 * 301.31958 * 23 21 20 44 44 H 1.07999 * 120.30642 * 0.02562 * 25 14 12 45 45 H 1.08995 * 109.47426 * 60.00579 * 26 9 8 46 46 H 1.09009 * 109.47001 * 179.97438 * 26 9 8 47 47 H 1.08997 * 109.47633 * 59.99412 * 27 5 4 48 48 H 1.08999 * 109.47027 * 299.99347 * 27 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9557 1.0530 0.0000 4 7 2.0217 -1.1671 -0.0005 5 6 3.4867 -1.1671 -0.0011 6 1 3.8498 -0.3251 -0.5906 7 6 3.9973 -1.0416 1.4357 8 6 5.5273 -1.0410 1.4350 9 6 6.0376 -2.3480 0.8248 10 1 5.6747 -3.1901 1.4141 11 7 7.5025 -2.3472 0.8236 12 6 8.1775 -2.7462 1.9198 13 8 7.5707 -3.1065 2.9097 14 6 9.6541 -2.7448 1.9188 15 6 10.3532 -2.3289 0.7773 16 6 11.7166 -2.3224 0.7607 17 6 12.4339 -2.7305 1.8833 18 7 13.7766 -2.8295 2.1579 19 6 13.9603 -3.2927 3.4326 20 6 12.7721 -3.5068 4.0181 21 6 12.5400 -4.0153 5.4176 22 8 12.1236 -5.3813 5.3651 23 14 14.1203 -3.8849 6.3957 24 6 11.7428 -3.1499 3.0374 25 6 10.3505 -3.1565 3.0513 26 6 5.5269 -2.4734 -0.6120 27 6 3.9965 -2.4743 -0.6112 28 1 -0.4849 -0.8401 0.0004 29 1 -0.4850 0.8399 0.0004 30 1 1.5367 -2.0072 -0.0005 31 1 3.6341 -0.1103 1.8704 32 1 3.6342 -1.8836 2.0251 33 1 5.8910 -0.9521 2.4587 34 1 5.8901 -0.1989 0.8457 35 1 7.9867 -2.0595 0.0339 36 1 9.8065 -2.0103 -0.0978 37 1 12.2424 -1.9998 -0.1258 38 1 14.4891 -2.6075 1.5384 39 1 14.9200 -3.4618 3.8982 40 1 11.7652 -3.4175 5.8976 41 1 12.7660 -5.9726 4.9495 42 1 13.9048 -4.3839 7.7777 43 1 15.1932 -4.6701 5.7342 44 1 9.8160 -3.4782 3.9329 45 1 5.8897 -1.6314 -1.2014 46 1 5.8908 -3.4044 -1.0470 47 1 3.6327 -2.5637 -1.6348 48 1 3.6335 -3.3162 -0.0218 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:55:01 Heat of formation + Delta-G solvation = -44.075336 kcal Electronic energy + Delta-G solvation = -31281.567913 eV Core-core repulsion = 26916.750648 eV Total energy + Delta-G solvation = -4364.817265 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.48280 -41.26847 -40.61993 -39.01878 -37.94364 -37.38669 -35.87063 -34.67636 -33.55024 -33.25481 -31.85114 -30.96639 -30.54127 -28.91249 -26.48443 -24.97973 -23.90303 -23.48351 -23.24583 -21.79069 -21.37200 -21.21169 -20.69440 -19.36482 -19.11533 -18.45162 -18.20388 -17.63958 -17.39553 -16.90840 -16.35527 -16.23824 -16.14944 -15.78839 -15.67709 -15.63700 -15.31169 -15.13433 -15.03634 -14.77028 -14.75953 -14.56449 -14.16431 -14.08447 -13.72425 -13.55009 -13.50414 -13.24580 -12.66904 -12.59622 -12.45409 -12.34268 -12.18236 -12.09651 -11.76951 -11.49163 -11.46373 -11.17334 -10.78332 -10.75017 -10.59920 -10.45365 -10.00453 -9.90114 -9.31474 -8.82798 -4.95463 -0.03131 0.20243 1.30649 1.47564 1.56027 1.92684 1.95342 2.00148 2.04607 2.24451 2.32858 2.99583 3.50572 3.51517 3.57214 3.61966 3.64414 3.73323 3.80725 3.86806 4.03413 4.05963 4.10145 4.19716 4.36408 4.38975 4.40441 4.44307 4.45085 4.53115 4.59804 4.68645 4.70784 4.82297 4.93665 5.01618 5.03666 5.03962 5.25279 5.26319 5.29434 5.34965 5.40834 5.50473 5.58860 5.61007 5.62397 5.79665 5.99116 6.01167 6.35520 6.53250 6.61225 7.02699 7.38140 7.72958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.869 5.869 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.161 3.839 6 H 0.091 0.909 7 C -0.127 4.127 8 C -0.126 4.126 9 C 0.145 3.855 10 H 0.091 0.909 11 N -0.726 5.726 12 C 0.565 3.435 13 O -0.537 6.537 14 C -0.168 4.168 15 C -0.066 4.066 16 C -0.134 4.134 17 C 0.118 3.882 18 N -0.585 5.585 19 C 0.058 3.942 20 C -0.188 4.188 21 C -0.042 4.042 22 O -0.528 6.528 23 Si 0.687 3.313 24 C -0.102 4.102 25 C 0.008 3.992 26 C -0.123 4.123 27 C -0.122 4.122 28 H 0.397 0.603 29 H 0.415 0.585 30 H 0.396 0.604 31 H 0.073 0.927 32 H 0.066 0.934 33 H 0.073 0.927 34 H 0.068 0.932 35 H 0.399 0.601 36 H 0.128 0.872 37 H 0.127 0.873 38 H 0.421 0.579 39 H 0.176 0.824 40 H 0.116 0.884 41 H 0.373 0.627 42 H -0.256 1.256 43 H -0.260 1.260 44 H 0.139 0.861 45 H 0.073 0.927 46 H 0.077 0.923 47 H 0.076 0.924 48 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.906 -0.838 -4.760 5.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C 0.403 3.597 3 O -0.471 6.471 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.166 4.166 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.109 0.891 11 N -0.377 5.377 12 C 0.354 3.646 13 O -0.414 6.414 14 C -0.173 4.173 15 C -0.086 4.086 16 C -0.155 4.155 17 C 0.010 3.990 18 N -0.187 5.187 19 C -0.068 4.068 20 C -0.195 4.195 21 C -0.153 4.153 22 O -0.334 6.334 23 Si 0.588 3.412 24 C -0.107 4.107 25 C -0.012 4.012 26 C -0.161 4.161 27 C -0.161 4.161 28 H 0.224 0.776 29 H 0.247 0.753 30 H 0.230 0.770 31 H 0.091 0.909 32 H 0.085 0.915 33 H 0.092 0.908 34 H 0.086 0.914 35 H 0.234 0.766 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.259 0.741 39 H 0.193 0.807 40 H 0.134 0.866 41 H 0.220 0.780 42 H -0.180 1.180 43 H -0.185 1.185 44 H 0.156 0.844 45 H 0.092 0.908 46 H 0.095 0.905 47 H 0.095 0.905 48 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 3.342 -0.449 -3.359 4.760 hybrid contribution -0.254 -1.227 -1.357 1.847 sum 3.088 -1.676 -4.717 5.881 Atomic orbital electron populations 1.43024 1.05460 1.12650 1.82520 1.15998 0.82070 0.84318 0.77335 1.90990 1.67791 1.30414 1.57859 1.45176 1.07218 1.07106 1.80255 1.20904 0.77870 0.98806 0.96818 0.89135 1.21901 0.95070 1.03085 0.96584 1.21882 0.95074 0.97331 1.02266 1.21037 0.79040 0.99129 0.96771 0.89079 1.45942 1.07068 1.68195 1.16520 1.18171 0.87070 0.76567 0.82809 1.90796 1.69944 1.47572 1.33090 1.19562 0.92542 1.09209 0.95960 1.20592 0.93360 0.97666 0.96991 1.19663 0.93592 1.05617 0.96595 1.18441 0.83533 1.00988 0.96079 1.41735 1.05944 1.57473 1.13571 1.21748 0.99259 1.00943 0.84877 1.20696 0.91353 1.10157 0.97287 1.24369 1.11207 0.84091 0.95601 1.86643 1.46985 1.17195 1.82579 0.95185 0.75410 0.91361 0.79283 1.18915 0.92786 1.05355 0.93618 1.20702 0.91425 0.91802 0.97257 1.21750 0.95224 1.03283 0.95870 1.21746 0.95262 0.97185 1.01893 0.77563 0.75259 0.77017 0.90872 0.91496 0.90849 0.91366 0.76592 0.85395 0.85470 0.74138 0.80726 0.86591 0.77973 1.18011 1.18506 0.84352 0.90811 0.90484 0.90546 0.90864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.42 8.88 27.63 0.25 1.66 16 2 C 0.70 1.52 8.80 -86.92 -0.77 0.75 16 3 O -0.59 -4.20 16.84 5.29 0.09 -4.11 16 4 N -0.74 0.53 5.08 -58.67 -0.30 0.23 16 5 C 0.16 -0.04 2.45 -67.93 -0.17 -0.21 16 6 H 0.09 0.15 7.58 -51.92 -0.39 -0.24 16 7 C -0.13 -0.11 5.49 -26.73 -0.15 -0.25 16 8 C -0.13 -0.11 5.49 -26.73 -0.15 -0.26 16 9 C 0.14 -0.01 2.45 -67.93 -0.17 -0.17 16 10 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 11 N -0.73 -0.05 5.03 -54.81 -0.28 -0.33 16 12 C 0.57 1.90 7.73 -12.42 -0.10 1.80 16 13 O -0.54 -3.85 15.99 5.30 0.08 -3.76 16 14 C -0.17 -0.39 5.87 -104.98 -0.62 -1.00 16 15 C -0.07 0.02 9.46 -39.54 -0.37 -0.35 16 16 C -0.13 0.08 10.00 -39.86 -0.40 -0.31 16 17 C 0.12 0.06 7.27 -83.96 -0.61 -0.55 16 18 N -0.59 1.10 6.05 -10.61 -0.06 1.03 16 19 C 0.06 -0.09 10.43 -16.73 -0.17 -0.27 16 20 C -0.19 -0.11 5.58 -102.68 -0.57 -0.69 16 21 C -0.04 -0.02 3.06 36.01 0.11 0.09 16 22 O -0.53 -1.18 12.88 -35.23 -0.45 -1.63 16 23 Si 0.69 -0.93 30.82 -169.99 -5.24 -6.17 16 24 C -0.10 -0.23 6.34 -105.16 -0.67 -0.90 16 25 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 26 C -0.12 0.29 5.39 -26.71 -0.14 0.15 16 27 C -0.12 0.30 5.39 -26.71 -0.14 0.16 16 28 H 0.40 -1.89 8.84 -40.82 -0.36 -2.25 16 29 H 0.42 -0.82 8.93 -40.82 -0.36 -1.18 16 30 H 0.40 -1.41 8.62 -40.82 -0.35 -1.76 16 31 H 0.07 0.22 8.14 -51.92 -0.42 -0.20 16 32 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 0.22 8.14 -51.93 -0.42 -0.20 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 35 H 0.40 -1.04 6.60 -40.82 -0.27 -1.31 16 36 H 0.13 -0.43 6.36 -52.49 -0.33 -0.76 16 37 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 38 H 0.42 -2.06 8.96 -40.82 -0.37 -2.42 16 39 H 0.18 -0.75 6.28 -52.48 -0.33 -1.08 16 40 H 0.12 0.06 7.96 -51.93 -0.41 -0.35 16 41 H 0.37 -0.35 8.70 45.56 0.40 0.05 16 42 H -0.26 -0.60 7.11 56.52 0.40 -0.19 16 43 H -0.26 0.08 7.00 56.52 0.40 0.48 16 44 H 0.14 0.62 7.64 -52.49 -0.40 0.22 16 45 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 46 H 0.08 -0.22 8.14 -51.92 -0.42 -0.64 16 47 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 48 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 393.80 15.07 5.93 5.93 Total: 0.00 -13.05 393.80 -12.02 -25.07 By element: Atomic # 1 Polarization: -8.98 SS G_CDS: -6.59 Total: -15.57 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: -5.45 Total: -2.36 kcal Atomic # 7 Polarization: 2.99 SS G_CDS: -0.39 Total: 2.60 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: -0.28 Total: -9.51 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.24 Total: -6.17 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -13.05 -12.02 -25.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.005 kcal (2) G-P(sol) polarization free energy of solvation -13.049 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.070 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.075 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds