Wall clock time and date at job start Sun Mar 7 2021 07:55:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34778 * 1 3 3 O 1.21581 * 120.00501 * 2 1 4 4 N 1.34775 * 119.99725 * 180.02562 * 2 1 3 5 5 C 1.46502 * 120.00341 * 179.97438 * 4 2 1 6 6 H 1.09002 * 109.46417 * 35.00245 * 5 4 2 7 7 C 1.52994 * 109.47409 * 154.99603 * 5 4 2 8 8 C 1.53003 * 109.47353 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.47040 * 300.00666 * 8 7 5 10 10 H 1.08997 * 109.47097 * 299.99555 * 9 8 7 11 11 N 1.46505 * 109.46673 * 179.97438 * 9 8 7 12 12 C 1.34778 * 119.99703 * 154.99852 * 11 9 8 13 13 O 1.21515 * 120.00132 * 0.02562 * 12 11 9 14 14 C 1.48164 * 120.00155 * 180.02562 * 12 11 9 15 15 C 1.39266 * 119.72594 * 179.97438 * 14 12 11 16 16 C 1.38637 * 119.06238 * 179.97438 * 15 14 12 17 17 C 1.38581 * 118.48554 * 0.04323 * 16 15 14 18 18 C 1.50699 * 120.32170 * 180.25099 * 17 16 15 19 19 O 1.42902 * 109.47430 * 299.72368 * 18 17 16 20 20 Si 1.86300 * 109.47188 * 179.72176 * 18 17 16 21 21 C 1.38605 * 119.35395 * 359.97438 * 17 16 15 22 22 N 1.31491 * 120.89861 * 359.97438 * 21 17 16 23 23 C 1.53001 * 109.47227 * 59.99970 * 9 8 7 24 24 C 1.52998 * 109.46791 * 299.99602 * 23 9 8 25 25 H 0.96998 * 119.99974 * 180.02562 * 1 2 3 26 26 H 0.97000 * 119.99658 * 359.97438 * 1 2 3 27 27 H 0.97004 * 119.99924 * 0.02562 * 4 2 1 28 28 H 1.09009 * 109.46501 * 60.00648 * 7 5 4 29 29 H 1.08993 * 109.47597 * 300.00794 * 7 5 4 30 30 H 1.08998 * 109.47195 * 180.02562 * 8 7 5 31 31 H 1.09002 * 109.46429 * 60.00669 * 8 7 5 32 32 H 0.96995 * 119.99804 * 335.00544 * 11 9 8 33 33 H 1.07996 * 120.46812 * 0.02562 * 15 14 12 34 34 H 1.07998 * 120.75180 * 180.02562 * 16 15 14 35 35 H 1.09003 * 109.46818 * 59.72466 * 18 17 16 36 36 H 0.96698 * 113.99578 * 300.00084 * 19 18 17 37 37 H 1.48501 * 109.99886 * 58.68588 * 20 18 17 38 38 H 1.48502 * 110.00127 * 180.02562 * 20 18 17 39 39 H 1.07999 * 119.54596 * 180.02562 * 21 17 16 40 40 H 1.08997 * 109.47421 * 59.99783 * 23 9 8 41 41 H 1.09000 * 109.46701 * 180.02562 * 23 9 8 42 42 H 1.08997 * 109.47286 * 300.00264 * 24 23 9 43 43 H 1.08999 * 109.47129 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9558 1.0529 0.0000 4 7 2.0216 -1.1672 -0.0005 5 6 3.4866 -1.1674 -0.0011 6 1 3.8502 -0.3257 0.5885 7 6 3.9968 -2.4748 0.6081 8 6 5.5268 -2.4752 0.6069 9 6 6.0357 -2.3495 -0.8305 10 1 5.6717 -3.1911 -1.4197 11 7 7.5007 -2.3493 -0.8315 12 6 8.1739 -2.7484 -1.9287 13 8 7.5657 -3.1081 -2.9173 14 6 9.6555 -2.7488 -1.9297 15 6 10.3453 -3.1630 -3.0664 16 6 11.7316 -3.1573 -3.0524 17 6 12.3792 -2.7383 -1.9011 18 6 13.8848 -2.7103 -1.8424 19 8 14.3944 -4.0285 -2.0539 20 14 14.4297 -2.0947 -0.1706 21 6 11.6286 -2.3398 -0.8061 22 7 10.3144 -2.3541 -0.8470 23 6 5.5256 -1.0419 -1.4396 24 6 3.9956 -1.0416 -1.4384 25 1 -0.4850 -0.8400 0.0004 26 1 -0.4849 0.8401 0.0004 27 1 1.5365 -2.0073 -0.0013 28 1 3.6331 -3.3165 0.0185 29 1 3.6338 -2.5646 1.6319 30 1 5.8902 -3.4069 1.0405 31 1 5.8907 -1.6335 1.1962 32 1 7.9862 -2.0619 -0.0424 33 1 9.8078 -3.4832 -3.9467 34 1 12.2939 -3.4725 -3.9189 35 1 14.2662 -2.0447 -2.6167 36 1 14.0953 -4.6753 -1.4002 37 1 13.8896 -2.9757 0.8959 38 1 15.9127 -2.0618 -0.1001 39 1 12.1301 -2.0123 0.0926 40 1 5.8895 -0.2002 -0.8504 41 1 5.8878 -0.9526 -2.4637 42 1 3.6316 -1.8833 -2.0277 43 1 3.6321 -0.1099 -1.8719 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:55:04 Heat of formation + Delta-G solvation = -65.963212 kcal Electronic energy + Delta-G solvation = -26482.850003 eV Core-core repulsion = 22529.073509 eV Total energy + Delta-G solvation = -3953.776495 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.152 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.90997 -41.15473 -40.37760 -38.92658 -38.06179 -35.96484 -34.72333 -34.08358 -33.29236 -32.94021 -31.89222 -29.48892 -27.60804 -25.06783 -24.35436 -23.93187 -23.20261 -21.85953 -21.56832 -21.28048 -19.41096 -18.94276 -18.73063 -18.28753 -17.88601 -16.98827 -16.74268 -16.53507 -16.33697 -16.20761 -16.09162 -15.95176 -15.47137 -15.23409 -15.01970 -14.82039 -14.44085 -14.38549 -14.32090 -14.04815 -13.59058 -13.51459 -13.28156 -12.73118 -12.71493 -12.45638 -12.21758 -12.15440 -11.54658 -11.51234 -11.30372 -11.16010 -11.13069 -10.79399 -10.63434 -10.61764 -10.34581 -10.04070 -9.93604 -5.11115 -0.57923 0.04501 1.07741 1.44490 1.64569 1.82962 1.87572 2.06297 2.30911 2.69527 2.93519 3.14997 3.40486 3.49127 3.57182 3.59960 3.64024 3.71619 3.90868 3.98781 4.03559 4.11773 4.15318 4.33307 4.34310 4.37377 4.40454 4.52161 4.64008 4.67358 4.81889 4.90883 4.94163 4.98043 5.01251 5.20384 5.24612 5.29121 5.34330 5.49921 5.56381 5.77473 5.99301 6.19013 6.34118 6.63600 7.00649 7.15986 7.71025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.869 5.869 2 C 0.705 3.295 3 O -0.592 6.592 4 N -0.742 5.742 5 C 0.161 3.839 6 H 0.091 0.909 7 C -0.122 4.122 8 C -0.123 4.123 9 C 0.142 3.858 10 H 0.092 0.908 11 N -0.707 5.707 12 C 0.573 3.427 13 O -0.528 6.528 14 C 0.081 3.919 15 C -0.108 4.108 16 C -0.053 4.053 17 C -0.149 4.149 18 C -0.074 4.074 19 O -0.526 6.526 20 Si 0.685 3.315 21 C 0.104 3.896 22 N -0.453 5.453 23 C -0.126 4.126 24 C -0.127 4.127 25 H 0.397 0.603 26 H 0.415 0.585 27 H 0.396 0.604 28 H 0.072 0.928 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.075 0.925 32 H 0.412 0.588 33 H 0.152 0.848 34 H 0.148 0.852 35 H 0.126 0.874 36 H 0.378 0.622 37 H -0.255 1.255 38 H -0.251 1.251 39 H 0.164 0.836 40 H 0.070 0.930 41 H 0.072 0.928 42 H 0.066 0.934 43 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.016 -1.882 2.933 3.630 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C 0.403 3.597 3 O -0.470 6.470 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.161 4.161 8 C -0.161 4.161 9 C 0.038 3.962 10 H 0.110 0.890 11 N -0.357 5.357 12 C 0.358 3.642 13 O -0.404 6.404 14 C -0.057 4.057 15 C -0.129 4.129 16 C -0.079 4.079 17 C -0.152 4.152 18 C -0.184 4.184 19 O -0.332 6.332 20 Si 0.585 3.415 21 C -0.056 4.056 22 N -0.164 5.164 23 C -0.166 4.166 24 C -0.166 4.166 25 H 0.224 0.776 26 H 0.248 0.752 27 H 0.230 0.770 28 H 0.091 0.909 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.094 0.906 32 H 0.248 0.752 33 H 0.170 0.830 34 H 0.165 0.835 35 H 0.143 0.857 36 H 0.226 0.774 37 H -0.179 1.179 38 H -0.176 1.176 39 H 0.181 0.819 40 H 0.088 0.912 41 H 0.091 0.909 42 H 0.085 0.915 43 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.591 -0.955 3.185 3.377 hybrid contribution -0.111 -1.784 -0.530 1.864 sum -0.703 -2.739 2.655 3.879 Atomic orbital electron populations 1.43027 1.05459 1.12658 1.82512 1.15996 0.82073 0.84313 0.77338 1.90990 1.67774 1.30417 1.57828 1.45173 1.07197 1.07114 1.80283 1.20905 0.77902 0.98861 0.96774 0.89054 1.21741 0.95191 0.97156 1.01980 1.21739 0.95212 1.03506 0.95654 1.21125 0.78715 0.99252 0.97120 0.89004 1.45889 1.07144 1.66142 1.16570 1.17845 0.85577 0.77426 0.83361 1.90817 1.68616 1.47670 1.33280 1.21188 0.94300 0.99264 0.90979 1.22231 0.94531 0.96862 0.99287 1.21560 0.93672 0.94673 0.97990 1.21593 0.97926 1.00290 0.95355 1.25020 0.90222 0.88639 1.14523 1.86635 1.73224 1.18153 1.55217 0.95011 0.82066 0.90352 0.74051 1.22626 0.89168 0.96234 0.97550 1.67525 1.09968 1.12464 1.26414 1.21883 0.95208 0.97291 1.02188 1.21900 0.94930 1.03125 0.96658 0.77562 0.75247 0.77019 0.90882 0.90450 0.90413 0.90594 0.75207 0.82987 0.83462 0.85668 0.77431 1.17936 1.17580 0.81892 0.91169 0.90902 0.91485 0.90794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.62 8.88 27.63 0.25 1.86 16 2 C 0.70 1.34 8.80 -86.92 -0.77 0.57 16 3 O -0.59 -4.06 16.84 5.29 0.09 -3.97 16 4 N -0.74 0.76 5.08 -58.68 -0.30 0.46 16 5 C 0.16 -0.09 2.45 -67.93 -0.17 -0.26 16 6 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 7 C -0.12 0.34 5.39 -26.73 -0.14 0.19 16 8 C -0.12 0.30 5.39 -26.73 -0.14 0.16 16 9 C 0.14 -0.06 2.45 -67.93 -0.17 -0.22 16 10 H 0.09 0.08 7.58 -51.93 -0.39 -0.31 16 11 N -0.71 -0.19 5.07 -54.65 -0.28 -0.47 16 12 C 0.57 1.52 7.78 -12.18 -0.09 1.43 16 13 O -0.53 -2.89 15.99 5.35 0.09 -2.81 16 14 C 0.08 0.13 6.75 -83.01 -0.56 -0.43 16 15 C -0.11 -0.08 9.63 -39.05 -0.38 -0.46 16 16 C -0.05 0.03 9.77 -39.31 -0.38 -0.35 16 17 C -0.15 0.18 5.40 -104.36 -0.56 -0.38 16 18 C -0.07 0.15 2.83 36.01 0.10 0.25 16 19 O -0.53 0.25 12.78 -35.23 -0.45 -0.20 16 20 Si 0.69 -1.81 29.82 -169.99 -5.07 -6.87 16 21 C 0.10 -0.10 9.84 -17.56 -0.17 -0.27 16 22 N -0.45 -0.33 9.54 -9.80 -0.09 -0.42 16 23 C -0.13 -0.05 5.49 -26.73 -0.15 -0.20 16 24 C -0.13 -0.04 5.49 -26.73 -0.15 -0.19 16 25 H 0.40 -1.98 8.84 -40.82 -0.36 -2.34 16 26 H 0.42 -0.90 8.93 -40.82 -0.36 -1.27 16 27 H 0.40 -1.54 8.62 -40.82 -0.35 -1.89 16 28 H 0.07 -0.24 8.14 -51.92 -0.42 -0.67 16 29 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.41 -0.44 7.93 -40.82 -0.32 -0.76 16 33 H 0.15 0.07 7.64 -52.49 -0.40 -0.33 16 34 H 0.15 -0.28 8.06 -52.49 -0.42 -0.71 16 35 H 0.13 -0.36 7.96 -51.93 -0.41 -0.77 16 36 H 0.38 -1.21 8.70 45.56 0.40 -0.82 16 37 H -0.25 0.21 7.11 56.52 0.40 0.61 16 38 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 39 H 0.16 -0.53 4.89 -52.49 -0.26 -0.79 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 LS Contribution 357.55 15.07 5.39 5.39 Total: 0.00 -10.57 357.55 -9.97 -20.54 By element: Atomic # 1 Polarization: -7.49 SS G_CDS: -5.87 Total: -13.36 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: -3.73 Total: -0.16 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -0.42 Total: 1.43 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -0.28 Total: -6.97 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: -5.07 Total: -6.87 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -10.57 -9.97 -20.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.423 kcal (2) G-P(sol) polarization free energy of solvation -10.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.963 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds