Wall clock time and date at job start Sun Mar 7 2021 07:55:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21580 * 119.99701 * 2 1 4 4 N 1.34769 * 119.99697 * 180.02562 * 2 1 3 5 5 C 1.46505 * 119.99798 * 179.97438 * 4 2 1 6 6 H 1.09002 * 109.47068 * 34.99973 * 5 4 2 7 7 C 1.53002 * 109.47411 * 155.00053 * 5 4 2 8 8 C 1.52997 * 109.47415 * 179.97438 * 7 5 4 9 9 C 1.53002 * 109.46978 * 300.00098 * 8 7 5 10 10 H 1.09002 * 109.46838 * 299.99316 * 9 8 7 11 11 N 1.46497 * 109.46729 * 179.97438 * 9 8 7 12 12 C 1.34778 * 119.99664 * 155.00120 * 11 9 8 13 13 O 1.21275 * 120.00492 * 359.97438 * 12 11 9 14 14 C 1.50701 * 119.99875 * 179.97438 * 12 11 9 15 15 C 1.50702 * 109.47373 * 179.97438 * 14 12 11 16 16 C 1.34848 * 125.89161 * 274.69445 * 15 14 12 17 17 C 1.40888 * 107.41722 * 179.88627 * 16 15 14 18 18 C 1.34855 * 107.41786 * 0.37201 * 17 16 15 19 19 C 1.50695 * 125.89118 * 179.74173 * 18 17 16 20 20 O 1.42898 * 109.47428 * 120.04104 * 19 18 17 21 21 Si 1.86301 * 109.47248 * 0.03827 * 19 18 17 22 22 N 1.36336 * 108.21532 * 359.77309 * 18 17 16 23 23 C 1.53002 * 109.47128 * 59.99726 * 9 8 7 24 24 C 1.52992 * 109.47106 * 300.00123 * 23 9 8 25 25 H 0.96998 * 120.00231 * 179.97438 * 1 2 3 26 26 H 0.97003 * 120.00133 * 359.97438 * 1 2 3 27 27 H 0.97005 * 120.00963 * 359.97438 * 4 2 1 28 28 H 1.09000 * 109.46986 * 300.00092 * 7 5 4 29 29 H 1.09002 * 109.47075 * 59.99363 * 7 5 4 30 30 H 1.09002 * 109.47045 * 59.99931 * 8 7 5 31 31 H 1.08998 * 109.47171 * 179.97438 * 8 7 5 32 32 H 0.97000 * 120.00413 * 334.99384 * 11 9 8 33 33 H 1.09006 * 109.47337 * 299.99806 * 14 12 11 34 34 H 1.09006 * 109.47440 * 59.99416 * 14 12 11 35 35 H 1.08004 * 126.28907 * 0.02562 * 16 15 14 36 36 H 1.08006 * 126.29126 * 180.17178 * 17 16 15 37 37 H 1.09002 * 109.46854 * 240.04631 * 19 18 17 38 38 H 0.96696 * 114.00023 * 299.99723 * 20 19 18 39 39 H 1.48509 * 109.99882 * 58.68228 * 21 19 18 40 40 H 1.48500 * 110.00211 * 180.02562 * 21 19 18 41 41 H 0.97000 * 125.63314 * 179.97438 * 22 18 17 42 42 H 1.09002 * 109.47070 * 60.00059 * 23 9 8 43 43 H 1.08996 * 109.46550 * 179.97438 * 23 9 8 44 44 H 1.09002 * 109.47103 * 299.99915 * 24 23 9 45 45 H 1.08998 * 109.46862 * 180.02562 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9557 1.0529 0.0000 4 7 2.0216 -1.1672 -0.0005 5 6 3.4866 -1.1672 -0.0011 6 1 3.8502 -0.3255 0.5884 7 6 3.9969 -2.4747 0.6080 8 6 5.5269 -2.4750 0.6069 9 6 6.0358 -2.3492 -0.8306 10 1 5.6719 -3.1910 -1.4197 11 7 7.5008 -2.3489 -0.8316 12 6 8.1739 -2.7480 -1.9289 13 8 7.5670 -3.1078 -2.9152 14 6 9.6809 -2.7471 -1.9302 15 6 10.1825 -3.2337 -3.2654 16 6 10.3621 -4.5221 -3.6206 17 6 10.8384 -4.5315 -4.9465 18 6 10.9395 -3.2481 -5.3482 19 6 11.4148 -2.7802 -6.6996 20 8 10.3781 -2.0300 -7.3356 21 14 11.8478 -4.2560 -7.7509 22 7 10.5383 -2.4470 -4.3206 23 6 5.5255 -1.0417 -1.4397 24 6 3.9956 -1.0415 -1.4384 25 1 -0.4850 -0.8400 -0.0004 26 1 -0.4850 0.8401 0.0004 27 1 1.5367 -2.0073 -0.0005 28 1 3.6340 -2.5645 1.6319 29 1 3.6333 -3.3164 0.0186 30 1 5.8908 -1.6333 1.1961 31 1 5.8904 -3.4063 1.0412 32 1 7.9863 -2.0614 -0.0426 33 1 10.0439 -1.7348 -1.7523 34 1 10.0454 -3.4072 -1.1430 35 1 10.1733 -5.3878 -3.0031 36 1 11.0813 -5.4057 -5.5324 37 1 12.2960 -2.1505 -6.5767 38 1 9.5619 -2.5287 -7.4773 39 1 10.6630 -5.1389 -7.8994 40 1 12.3186 -3.8079 -9.0861 41 1 10.5108 -1.4775 -4.3373 42 1 5.8894 -0.2000 -0.8505 43 1 5.8884 -0.9520 -2.4635 44 1 3.6316 -1.8832 -2.0277 45 1 3.6321 -0.1102 -1.8728 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:55:57 Heat of formation + Delta-G solvation = -64.349956 kcal Electronic energy + Delta-G solvation = -27134.527592 eV Core-core repulsion = 23153.509575 eV Total energy + Delta-G solvation = -3981.018017 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.168 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.27285 -41.29210 -40.56812 -38.95349 -37.73754 -35.92707 -34.72976 -33.75685 -32.89347 -31.93852 -31.82845 -29.90501 -28.62507 -25.23032 -23.98226 -23.67123 -21.92120 -21.64338 -21.36903 -21.24187 -20.84700 -19.21818 -18.92498 -18.39269 -18.00425 -17.53323 -16.75722 -16.43208 -16.34128 -16.23056 -16.06720 -15.55789 -15.26521 -15.17961 -14.94340 -14.77073 -14.53641 -14.30783 -14.02401 -13.97470 -13.72906 -13.68939 -13.50123 -13.33480 -12.81263 -12.71742 -12.45436 -12.26864 -12.09088 -11.72665 -11.58440 -11.55012 -11.23116 -10.82874 -10.73749 -10.64957 -10.09200 -9.97556 -9.69031 -8.87682 -4.86030 1.14993 1.35569 1.66060 1.73227 1.85211 1.95132 2.01917 2.27400 2.31769 2.53381 3.41167 3.46014 3.52378 3.55446 3.66347 3.86881 3.90955 3.94025 4.00140 4.04264 4.12653 4.29834 4.33910 4.36038 4.37718 4.49035 4.60123 4.62100 4.62642 4.84938 4.86154 4.93266 4.95867 5.15427 5.20145 5.25735 5.34604 5.38062 5.47953 5.52674 5.74104 5.96238 6.07133 6.22479 6.43514 6.45109 6.69083 6.97251 7.24508 7.67571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.868 5.868 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.162 3.838 6 H 0.091 0.909 7 C -0.123 4.123 8 C -0.122 4.122 9 C 0.144 3.856 10 H 0.090 0.910 11 N -0.730 5.730 12 C 0.512 3.488 13 O -0.522 6.522 14 C -0.073 4.073 15 C 0.037 3.963 16 C -0.174 4.174 17 C -0.186 4.186 18 C -0.009 4.009 19 C -0.055 4.055 20 O -0.537 6.537 21 Si 0.714 3.286 22 N -0.535 5.535 23 C -0.125 4.125 24 C -0.127 4.127 25 H 0.397 0.603 26 H 0.416 0.584 27 H 0.396 0.604 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.077 0.923 32 H 0.401 0.599 33 H 0.099 0.901 34 H 0.117 0.883 35 H 0.136 0.864 36 H 0.141 0.859 37 H 0.114 0.886 38 H 0.379 0.621 39 H -0.257 1.257 40 H -0.258 1.258 41 H 0.412 0.588 42 H 0.067 0.933 43 H 0.070 0.930 44 H 0.066 0.934 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.301 -3.665 5.532 6.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.436 5.436 2 C 0.403 3.597 3 O -0.471 6.471 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.161 4.161 8 C -0.161 4.161 9 C 0.040 3.960 10 H 0.108 0.892 11 N -0.382 5.382 12 C 0.297 3.703 13 O -0.397 6.397 14 C -0.114 4.114 15 C -0.077 4.077 16 C -0.198 4.198 17 C -0.211 4.211 18 C -0.123 4.123 19 C -0.165 4.165 20 O -0.344 6.344 21 Si 0.614 3.386 22 N -0.130 5.130 23 C -0.165 4.165 24 C -0.167 4.167 25 H 0.225 0.775 26 H 0.248 0.752 27 H 0.230 0.770 28 H 0.095 0.905 29 H 0.091 0.909 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.235 0.765 33 H 0.118 0.882 34 H 0.135 0.865 35 H 0.154 0.846 36 H 0.159 0.841 37 H 0.132 0.868 38 H 0.228 0.772 39 H -0.182 1.182 40 H -0.184 1.184 41 H 0.249 0.751 42 H 0.086 0.914 43 H 0.088 0.912 44 H 0.085 0.915 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.807 -2.938 4.079 5.091 hybrid contribution -1.759 0.607 0.415 1.906 sum -0.952 -2.331 4.494 5.151 Atomic orbital electron populations 1.43027 1.05447 1.12680 1.82479 1.15993 0.82084 0.84299 0.77326 1.90988 1.67800 1.30412 1.57863 1.45172 1.07191 1.07133 1.80285 1.20892 0.77938 0.98827 0.96704 0.89130 1.21744 0.95289 0.97150 1.01958 1.21735 0.95233 1.03316 0.95776 1.21028 0.79211 0.98969 0.96803 0.89205 1.46067 1.07154 1.68385 1.16607 1.20602 0.89822 0.76893 0.82946 1.90765 1.70013 1.45891 1.33037 1.20148 0.92179 1.04126 0.94899 1.19484 1.07421 0.90939 0.89815 1.20579 1.07475 0.95077 0.96690 1.20647 1.08431 0.95009 0.97028 1.20777 1.09112 0.90896 0.91465 1.24783 0.93023 1.06932 0.91738 1.86560 1.25935 1.41310 1.80576 0.94448 0.87601 0.77348 0.79217 1.41791 1.51549 1.08733 1.10932 1.21865 0.95203 0.97394 1.02011 1.21898 0.95012 1.03074 0.96685 0.77542 0.75230 0.76992 0.90474 0.90886 0.90796 0.90438 0.76520 0.88229 0.86451 0.84602 0.84113 0.86780 0.77242 1.18153 1.18352 0.75112 0.91413 0.91153 0.91535 0.90899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.59 8.88 27.63 0.25 1.84 16 2 C 0.70 1.35 8.80 -86.92 -0.77 0.58 16 3 O -0.59 -4.06 16.84 5.30 0.09 -3.97 16 4 N -0.74 0.75 5.08 -58.67 -0.30 0.45 16 5 C 0.16 -0.11 2.46 -67.93 -0.17 -0.27 16 6 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 7 C -0.12 0.37 5.39 -26.73 -0.14 0.22 16 8 C -0.12 0.39 5.39 -26.73 -0.14 0.25 16 9 C 0.14 -0.16 2.45 -67.93 -0.17 -0.33 16 10 H 0.09 0.08 7.58 -51.93 -0.39 -0.31 16 11 N -0.73 1.41 5.08 -53.81 -0.27 1.13 16 12 C 0.51 0.36 7.79 -10.98 -0.09 0.27 16 13 O -0.52 -2.84 15.70 5.56 0.09 -2.76 16 14 C -0.07 0.13 6.24 -29.03 -0.18 -0.05 16 15 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 16 C -0.17 -0.40 10.76 -39.78 -0.43 -0.82 16 17 C -0.19 -0.39 9.37 -39.78 -0.37 -0.76 16 18 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 19 C -0.06 -0.04 3.08 36.00 0.11 0.07 16 20 O -0.54 -1.30 12.88 -35.23 -0.45 -1.75 16 21 Si 0.71 -0.12 30.58 -169.99 -5.20 -5.32 16 22 N -0.54 -0.74 6.07 -5.44 -0.03 -0.77 16 23 C -0.13 -0.02 5.49 -26.73 -0.15 -0.16 16 24 C -0.13 -0.05 5.49 -26.74 -0.15 -0.20 16 25 H 0.40 -1.97 8.84 -40.82 -0.36 -2.33 16 26 H 0.42 -0.89 8.93 -40.82 -0.36 -1.26 16 27 H 0.40 -1.52 8.62 -40.82 -0.35 -1.88 16 28 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 29 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.40 -1.92 8.60 -40.82 -0.35 -2.27 16 33 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.12 -0.47 8.14 -51.93 -0.42 -0.90 16 35 H 0.14 0.15 8.06 -52.48 -0.42 -0.28 16 36 H 0.14 0.05 6.22 -52.48 -0.33 -0.27 16 37 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 38 H 0.38 0.15 8.70 45.56 0.40 0.55 16 39 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 40 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 41 H 0.41 -0.05 8.96 -40.82 -0.37 -0.42 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 43 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 44 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 45 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 LS Contribution 371.68 15.07 5.60 5.60 Total: 0.00 -12.53 371.68 -10.64 -23.17 By element: Atomic # 1 Polarization: -8.69 SS G_CDS: -6.77 Total: -15.46 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -3.63 Total: -2.17 kcal Atomic # 7 Polarization: 3.02 SS G_CDS: -0.36 Total: 2.66 kcal Atomic # 8 Polarization: -8.20 SS G_CDS: -0.28 Total: -8.48 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.20 Total: -5.32 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -12.53 -10.64 -23.17 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.183 kcal (2) G-P(sol) polarization free energy of solvation -12.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.350 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds