Wall clock time and date at job start Sun Mar 7 2021 07:56:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34783 * 1 3 3 O 1.21576 * 120.00162 * 2 1 4 4 N 1.34778 * 119.99734 * 179.97438 * 2 1 3 5 5 C 1.46496 * 120.00072 * 179.97438 * 4 2 1 6 6 H 1.09002 * 109.47021 * 34.99856 * 5 4 2 7 7 C 1.53005 * 109.47414 * 154.99744 * 5 4 2 8 8 C 1.52997 * 109.47452 * 180.02562 * 7 5 4 9 9 C 1.53002 * 109.46817 * 300.00239 * 8 7 5 10 10 H 1.08992 * 109.47063 * 299.99823 * 9 8 7 11 11 N 1.46499 * 109.46799 * 179.97438 * 9 8 7 12 12 C 1.34778 * 119.99771 * 85.00174 * 11 9 8 13 13 O 1.21279 * 120.00041 * 359.97438 * 12 11 9 14 14 C 1.50703 * 119.99935 * 179.97438 * 12 11 9 15 15 C 1.53035 * 109.33178 * 179.65147 * 14 12 11 16 16 C 1.53542 * 108.56506 * 169.83247 * 15 14 12 17 17 N 1.47035 * 107.65466 * 299.05066 * 16 15 14 18 18 C 1.38920 * 118.88341 * 43.66957 * 17 16 15 19 19 C 1.30895 * 121.78495 * 346.50894 * 18 17 16 20 20 C 1.50699 * 118.38329 * 180.56678 * 19 18 17 21 21 O 1.42898 * 109.46919 * 250.16487 * 20 19 18 22 22 Si 1.86302 * 109.46745 * 10.16480 * 20 19 18 23 23 C 1.53000 * 109.47233 * 60.00194 * 9 8 7 24 24 C 1.52997 * 109.47060 * 299.99657 * 23 9 8 25 25 H 0.96993 * 119.99965 * 180.02562 * 1 2 3 26 26 H 0.96996 * 119.99605 * 0.02562 * 1 2 3 27 27 H 0.97007 * 120.00235 * 359.97438 * 4 2 1 28 28 H 1.09002 * 109.46935 * 60.00059 * 7 5 4 29 29 H 1.09001 * 109.46812 * 300.00401 * 7 5 4 30 30 H 1.08993 * 109.47194 * 179.97438 * 8 7 5 31 31 H 1.09002 * 109.46695 * 59.99734 * 8 7 5 32 32 H 0.97006 * 120.00568 * 264.99947 * 11 9 8 33 33 H 1.09006 * 109.32835 * 60.00056 * 14 12 11 34 34 H 1.09007 * 109.62128 * 289.55727 * 15 14 12 35 35 H 1.09008 * 109.62038 * 49.92247 * 15 14 12 36 36 H 1.09003 * 109.82154 * 58.59121 * 16 15 14 37 37 H 1.08998 * 109.82171 * 179.51402 * 16 15 14 38 38 H 0.97000 * 120.55452 * 223.68162 * 17 16 15 39 39 H 1.07997 * 119.07806 * 166.68475 * 18 17 16 40 40 H 1.09002 * 109.46876 * 130.16137 * 20 19 18 41 41 H 0.96694 * 114.00056 * 60.00049 * 21 20 19 42 42 H 1.48496 * 110.00078 * 58.68276 * 22 20 19 43 43 H 1.48500 * 109.99512 * 180.02562 * 22 20 19 44 44 H 1.09002 * 109.47398 * 59.99826 * 23 9 8 45 45 H 1.09001 * 109.47194 * 180.02562 * 23 9 8 46 46 H 1.08996 * 109.47853 * 180.02562 * 24 23 9 47 47 H 1.09002 * 109.47153 * 300.00319 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9557 1.0529 0.0000 4 7 2.0217 -1.1672 0.0005 5 6 3.4866 -1.1673 0.0000 6 1 3.8502 -0.3251 0.5887 7 6 3.9969 -2.4743 0.6103 8 6 5.5268 -2.4741 0.6103 9 6 6.0368 -2.3491 -0.8268 10 1 5.6735 -3.1912 -1.4157 11 7 7.5017 -2.3483 -0.8267 12 6 8.1762 -3.5152 -0.8260 13 8 7.5703 -4.5658 -0.8248 14 6 9.6832 -3.5144 -0.8265 15 6 10.1906 -4.9582 -0.8166 16 6 11.7042 -4.9462 -1.0742 17 7 11.9267 -4.3440 -2.3969 18 6 11.2148 -3.2023 -2.7427 19 6 10.1797 -2.7991 -2.0504 20 6 9.4556 -1.5569 -2.5019 21 8 9.6955 -0.5006 -1.5699 22 14 10.0765 -1.0534 -4.1847 23 6 5.5266 -1.0421 -1.4371 24 6 3.9967 -1.0423 -1.4371 25 1 -0.4850 -0.8400 0.0004 26 1 -0.4849 0.8400 -0.0004 27 1 1.5366 -2.0073 0.0013 28 1 3.6333 -3.3165 0.0216 29 1 3.6339 -2.5631 1.6343 30 1 5.8903 -3.4049 1.0455 31 1 5.8900 -1.6319 1.1993 32 1 7.9864 -1.5080 -0.8273 33 1 10.0441 -2.9992 0.0637 34 1 9.9880 -5.4108 0.1541 35 1 9.6880 -5.5281 -1.5982 36 1 12.2047 -4.3529 -0.3089 37 1 12.0891 -5.9659 -1.0629 38 1 12.5598 -4.7373 -3.0177 39 1 11.5225 -2.6338 -3.6079 40 1 8.3858 -1.7589 -2.5548 41 1 10.6287 -0.2671 -1.4716 42 1 9.8618 -2.1558 -5.1561 43 1 9.3707 0.1709 -4.6409 44 1 5.8899 -0.1999 -0.8481 45 1 5.8895 -0.9532 -2.4611 46 1 3.6331 -0.1114 -1.8723 47 1 3.6334 -1.8845 -2.0261 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_15608500.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:56:04 Heat of formation + Delta-G solvation = -79.045057 kcal Electronic energy + Delta-G solvation = -29227.812910 eV Core-core repulsion = 25218.846187 eV Total energy + Delta-G solvation = -4008.966723 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.183 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.66231 -40.96016 -39.67311 -38.61985 -37.70166 -35.79225 -34.67384 -33.85113 -33.04346 -32.72884 -31.84317 -29.25892 -27.25931 -25.84393 -23.99662 -23.43299 -23.20731 -21.87328 -21.36559 -21.13928 -19.37706 -19.15352 -18.91317 -18.29930 -17.91426 -17.44619 -17.16783 -16.59967 -16.17631 -16.07663 -15.94852 -15.51139 -15.32430 -15.29921 -14.99272 -14.90293 -14.62336 -14.41872 -14.12587 -14.01850 -13.93526 -13.43509 -13.21290 -13.17981 -12.74390 -12.61193 -12.23885 -12.17465 -12.11903 -11.94614 -11.83001 -11.69685 -11.43703 -11.30937 -11.16459 -10.60765 -10.56236 -10.33649 -9.95382 -9.76862 -8.56137 -5.05658 1.18875 1.31807 1.62942 1.87825 1.94295 2.01455 2.32152 2.38995 2.50306 3.40147 3.51787 3.63019 3.65146 3.71909 3.77271 3.93600 3.99076 4.15211 4.19818 4.23243 4.24115 4.35380 4.40178 4.44807 4.46169 4.51715 4.62423 4.68452 4.73092 4.75777 4.80045 5.01155 5.07536 5.10826 5.12695 5.15257 5.29123 5.31040 5.33722 5.37499 5.57527 5.68041 5.79584 6.00510 6.19808 6.55510 6.73081 6.77690 7.02409 7.44196 7.72390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.869 5.869 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.162 3.838 6 H 0.091 0.909 7 C -0.123 4.123 8 C -0.124 4.124 9 C 0.139 3.861 10 H 0.088 0.912 11 N -0.728 5.728 12 C 0.525 3.475 13 O -0.543 6.543 14 C -0.037 4.037 15 C -0.121 4.121 16 C 0.120 3.880 17 N -0.748 5.748 18 C 0.161 3.839 19 C -0.284 4.284 20 C -0.067 4.067 21 O -0.550 6.550 22 Si 0.667 3.333 23 C -0.124 4.124 24 C -0.126 4.126 25 H 0.397 0.603 26 H 0.415 0.585 27 H 0.396 0.604 28 H 0.071 0.929 29 H 0.073 0.927 30 H 0.074 0.926 31 H 0.069 0.931 32 H 0.414 0.586 33 H 0.098 0.902 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.064 0.936 37 H 0.083 0.917 38 H 0.404 0.596 39 H 0.133 0.867 40 H 0.119 0.881 41 H 0.381 0.619 42 H -0.260 1.260 43 H -0.255 1.255 44 H 0.074 0.926 45 H 0.070 0.930 46 H 0.075 0.925 47 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.564 -2.045 -0.060 4.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C 0.403 3.597 3 O -0.471 6.471 4 N -0.397 5.397 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.162 4.162 8 C -0.163 4.163 9 C 0.035 3.965 10 H 0.106 0.894 11 N -0.384 5.384 12 C 0.311 3.689 13 O -0.420 6.420 14 C -0.058 4.058 15 C -0.160 4.160 16 C -0.004 4.004 17 N -0.378 5.378 18 C 0.039 3.961 19 C -0.295 4.295 20 C -0.178 4.178 21 O -0.356 6.356 22 Si 0.570 3.430 23 C -0.162 4.162 24 C -0.165 4.165 25 H 0.224 0.776 26 H 0.247 0.753 27 H 0.230 0.770 28 H 0.089 0.911 29 H 0.092 0.908 30 H 0.093 0.907 31 H 0.088 0.912 32 H 0.255 0.745 33 H 0.116 0.884 34 H 0.099 0.901 35 H 0.098 0.902 36 H 0.082 0.918 37 H 0.101 0.899 38 H 0.238 0.762 39 H 0.150 0.850 40 H 0.136 0.864 41 H 0.229 0.771 42 H -0.185 1.185 43 H -0.180 1.180 44 H 0.093 0.907 45 H 0.089 0.911 46 H 0.093 0.907 47 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 2.938 -1.891 -0.706 3.565 hybrid contribution -0.754 -0.516 0.043 0.915 sum 2.184 -2.408 -0.663 3.318 Atomic orbital electron populations 1.43027 1.05465 1.12646 1.82540 1.16001 0.82067 0.84321 0.77339 1.90986 1.67783 1.30415 1.57868 1.45191 1.07239 1.07107 1.80209 1.20896 0.77816 0.99089 0.96563 0.89080 1.21761 0.95898 0.96784 1.01709 1.21848 0.94411 1.03159 0.96915 1.21038 0.79917 0.98906 0.96655 0.89414 1.46695 1.06963 1.09830 1.74948 1.20575 0.89864 0.83509 0.74903 1.90689 1.70401 1.31409 1.49475 1.19668 0.91253 0.97006 0.97857 1.21738 0.95333 0.95092 1.03855 1.21650 0.95699 0.98426 0.84633 1.44610 1.46594 1.28641 1.17960 1.20274 0.91084 0.88112 0.96638 1.20487 1.01808 1.03238 1.03922 1.25139 1.03420 0.86285 1.03001 1.86321 1.31703 1.53315 1.64284 0.95365 0.90835 0.80933 0.75903 1.21760 0.95711 0.97103 1.01667 1.21883 0.94553 1.03090 0.96986 0.77565 0.75261 0.77008 0.91053 0.90794 0.90732 0.91236 0.74514 0.88433 0.90144 0.90212 0.91822 0.89886 0.76201 0.85012 0.86360 0.77063 1.18533 1.18022 0.90684 0.91132 0.90654 0.91519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.11 8.88 27.63 0.25 1.35 16 2 C 0.70 1.81 8.80 -86.91 -0.77 1.04 16 3 O -0.59 -4.40 16.84 5.30 0.09 -4.31 16 4 N -0.74 0.07 5.08 -58.68 -0.30 -0.23 16 5 C 0.16 0.10 2.45 -67.93 -0.17 -0.07 16 6 H 0.09 0.24 7.58 -51.93 -0.39 -0.15 16 7 C -0.12 0.08 5.39 -26.73 -0.14 -0.07 16 8 C -0.12 -0.07 5.49 -26.73 -0.15 -0.22 16 9 C 0.14 0.16 2.45 -67.93 -0.17 -0.01 16 10 H 0.09 0.23 7.58 -51.93 -0.39 -0.16 16 11 N -0.73 -1.01 3.38 -53.81 -0.18 -1.19 16 12 C 0.52 1.57 6.79 -10.98 -0.07 1.50 16 13 O -0.54 -3.47 15.46 5.56 0.09 -3.38 16 14 C -0.04 -0.02 2.75 -93.14 -0.26 -0.28 16 15 C -0.12 -0.03 4.91 -26.43 -0.13 -0.16 16 16 C 0.12 -0.26 7.16 -3.47 -0.02 -0.29 16 17 N -0.75 1.75 5.83 -60.73 -0.35 1.40 16 18 C 0.16 -0.28 9.60 -16.02 -0.15 -0.44 16 19 C -0.28 0.17 5.02 -101.28 -0.51 -0.34 16 20 C -0.07 0.05 1.69 36.01 0.06 0.11 16 21 O -0.55 0.93 11.40 -35.23 -0.40 0.52 16 22 Si 0.67 -0.77 29.71 -169.99 -5.05 -5.82 16 23 C -0.12 -0.06 5.39 -26.73 -0.14 -0.20 16 24 C -0.13 -0.09 5.50 -26.73 -0.15 -0.24 16 25 H 0.40 -1.73 8.84 -40.82 -0.36 -2.09 16 26 H 0.42 -0.70 8.93 -40.82 -0.36 -1.06 16 27 H 0.40 -1.13 8.62 -40.82 -0.35 -1.48 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.41 0.26 5.18 -40.82 -0.21 0.05 16 33 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.08 0.02 8.14 -51.92 -0.42 -0.41 16 35 H 0.08 0.20 7.75 -51.92 -0.40 -0.20 16 36 H 0.06 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 38 H 0.40 -1.66 8.96 -40.82 -0.37 -2.03 16 39 H 0.13 -0.50 4.47 -52.49 -0.23 -0.73 16 40 H 0.12 0.11 5.32 -51.93 -0.28 -0.17 16 41 H 0.38 -2.00 8.70 45.56 0.40 -1.60 16 42 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 43 H -0.26 -0.61 7.11 56.52 0.40 -0.20 16 44 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 45 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 46 H 0.07 0.20 8.14 -51.93 -0.42 -0.23 16 47 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 LS Contribution 363.84 15.07 5.48 5.48 Total: 0.00 -10.56 363.84 -10.38 -20.94 By element: Atomic # 1 Polarization: -7.87 SS G_CDS: -7.23 Total: -15.10 kcal Atomic # 6 Polarization: 3.11 SS G_CDS: -2.77 Total: 0.34 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -0.59 Total: 1.33 kcal Atomic # 8 Polarization: -6.95 SS G_CDS: -0.23 Total: -7.17 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.05 Total: -5.82 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -10.56 -10.38 -20.94 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_15608500.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.106 kcal (2) G-P(sol) polarization free energy of solvation -10.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds