Wall clock time and date at job start Sun Mar 7 2021 07:56:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21578 * 120.00038 * 2 1 4 4 N 1.34776 * 119.99425 * 180.02562 * 2 1 3 5 5 C 1.46507 * 119.99795 * 180.02562 * 4 2 1 6 6 H 1.08999 * 109.46916 * 34.99607 * 5 4 2 7 7 C 1.52997 * 109.47571 * 154.99906 * 5 4 2 8 8 C 1.52989 * 109.47270 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.47347 * 299.99744 * 8 7 5 10 10 H 1.08996 * 109.47213 * 300.00538 * 9 8 7 11 11 N 1.46500 * 109.47622 * 180.02562 * 9 8 7 12 12 C 1.34770 * 120.00235 * 154.99945 * 11 9 8 13 13 O 1.21290 * 120.00032 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00142 * 179.97438 * 12 11 9 15 15 C 1.53004 * 109.47457 * 180.02562 * 14 12 11 16 16 O 1.42894 * 109.47177 * 180.02562 * 15 14 12 17 17 C 1.35899 * 116.99856 * 180.02562 * 16 15 14 18 18 C 1.38729 * 120.05859 * 179.97438 * 17 16 15 19 19 C 1.38150 * 119.95038 * 180.02562 * 18 17 16 20 20 C 1.38265 * 120.04950 * 0.02562 * 19 18 17 21 21 C 1.50703 * 119.94136 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47055 * 300.00303 * 21 20 19 23 23 Si 1.86304 * 109.46911 * 180.02562 * 21 20 19 24 24 C 1.38271 * 120.11462 * 0.25426 * 20 19 18 25 25 C 1.38145 * 120.04946 * 359.44874 * 24 20 19 26 26 C 1.53000 * 109.46926 * 60.00242 * 9 8 7 27 27 C 1.53002 * 109.46929 * 275.00031 * 5 4 2 28 28 H 0.97003 * 120.00192 * 180.02562 * 1 2 3 29 29 H 0.97002 * 119.99933 * 359.97438 * 1 2 3 30 30 H 0.96994 * 120.00655 * 359.97438 * 4 2 1 31 31 H 1.09001 * 109.46829 * 59.99256 * 7 5 4 32 32 H 1.08999 * 109.47102 * 300.00434 * 7 5 4 33 33 H 1.08999 * 109.47378 * 180.02562 * 8 7 5 34 34 H 1.09001 * 109.47767 * 59.99873 * 8 7 5 35 35 H 0.97003 * 119.99591 * 335.00550 * 11 9 8 36 36 H 1.09001 * 109.46816 * 60.00467 * 14 12 11 37 37 H 1.08997 * 109.47326 * 300.00355 * 14 12 11 38 38 H 1.08998 * 109.46749 * 59.99785 * 15 14 12 39 39 H 1.09004 * 109.46620 * 300.00549 * 15 14 12 40 40 H 1.08007 * 120.02564 * 0.04577 * 18 17 16 41 41 H 1.07997 * 119.97457 * 180.02562 * 19 18 17 42 42 H 1.09002 * 109.47152 * 60.00111 * 21 20 19 43 43 H 0.96703 * 114.00193 * 180.02562 * 22 21 20 44 44 H 1.48495 * 110.00011 * 60.00027 * 23 21 20 45 45 H 1.48509 * 109.99497 * 181.32041 * 23 21 20 46 46 H 1.07998 * 119.96980 * 179.70625 * 24 20 19 47 47 H 1.08008 * 120.02012 * 180.29681 * 25 24 20 48 48 H 1.08999 * 109.47406 * 59.99958 * 26 9 8 49 49 H 1.09001 * 109.47183 * 180.02562 * 26 9 8 50 50 H 1.08996 * 109.47077 * 300.00057 * 27 5 4 51 51 H 1.09001 * 109.47216 * 59.99317 * 27 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9557 1.0529 0.0000 4 7 2.0215 -1.1673 -0.0005 5 6 3.4866 -1.1674 0.0000 6 1 3.8497 -0.3259 0.5901 7 6 3.9964 -2.4751 0.6090 8 6 5.5263 -2.4754 0.6090 9 6 6.0363 -2.3491 -0.8280 10 1 5.6728 -3.1905 -1.4178 11 7 7.5013 -2.3500 -0.8281 12 6 8.1749 -2.7489 -1.9252 13 8 7.5681 -3.1068 -2.9126 14 6 9.6818 -2.7493 -1.9255 15 6 10.1915 -3.2416 -3.2815 16 8 11.6204 -3.2425 -3.2816 17 6 12.2371 -3.6554 -4.4200 18 6 13.6224 -3.6810 -4.4899 19 6 14.2469 -4.1007 -5.6485 20 6 13.4924 -4.4945 -6.7381 21 6 14.1762 -4.9513 -8.0010 22 8 14.9929 -3.8947 -8.5094 23 14 12.8927 -5.4095 -9.2713 24 6 12.1115 -4.4644 -6.6731 25 6 11.4824 -4.0514 -5.5147 26 6 5.5266 -1.0413 -1.4370 27 6 3.9971 -1.0407 -1.4367 28 1 -0.4850 -0.8401 0.0004 29 1 -0.4850 0.8401 0.0004 30 1 1.5366 -2.0073 -0.0005 31 1 3.6331 -3.3165 0.0189 32 1 3.6326 -2.5653 1.6325 33 1 5.8895 -3.4072 1.0424 34 1 5.8899 -1.6339 1.1988 35 1 7.9865 -2.0635 -0.0385 36 1 10.0451 -3.4103 -1.1386 37 1 10.0455 -1.7374 -1.7467 38 1 9.8281 -2.5803 -4.0681 39 1 9.8278 -4.2535 -3.4607 40 1 14.2122 -3.3734 -3.6390 41 1 15.3253 -4.1212 -5.7032 42 1 14.7988 -5.8192 -7.7836 43 1 15.4641 -4.1186 -9.3236 44 1 12.0378 -4.2342 -9.5763 45 1 13.5541 -5.8918 -10.5104 46 1 11.5245 -4.7681 -7.5272 47 1 10.4037 -4.0327 -5.4628 48 1 5.8901 -0.1999 -0.8471 49 1 5.8896 -0.9515 -2.4608 50 1 3.6339 -1.8821 -2.0268 51 1 3.6339 -0.1091 -1.8706 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:56:19 Heat of formation + Delta-G solvation = -119.363054 kcal Electronic energy + Delta-G solvation = -31527.130929 eV Core-core repulsion = 27006.707324 eV Total energy + Delta-G solvation = -4520.423605 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.48743 -41.15364 -40.68739 -39.23295 -38.84620 -37.29520 -35.99648 -34.74087 -33.82842 -33.13921 -31.96728 -31.92974 -31.46464 -29.28452 -26.51605 -25.52247 -23.99641 -23.87184 -23.09463 -21.97379 -21.82015 -21.51086 -21.08631 -19.46247 -19.13513 -18.48685 -18.37121 -17.81427 -17.58487 -17.43813 -16.93373 -16.68540 -16.31828 -16.24674 -15.94505 -15.64321 -15.54396 -15.40868 -15.18437 -14.91874 -14.72904 -14.60118 -14.35077 -14.08904 -14.06373 -13.87944 -13.61129 -13.60145 -13.34561 -12.93469 -12.84399 -12.68868 -12.48846 -12.32673 -12.27821 -11.92433 -11.69171 -11.60017 -11.59507 -11.56792 -11.23736 -10.93651 -10.64921 -10.44878 -10.15597 -9.98833 -9.91631 -9.07917 -4.93303 0.40034 0.43344 1.32701 1.53971 1.62324 1.68736 1.91193 1.99376 2.27401 2.48427 2.72920 3.39725 3.44784 3.49733 3.53832 3.56091 3.83558 3.84359 3.88293 3.89308 3.93593 3.97683 4.06373 4.09995 4.27960 4.29641 4.33244 4.34683 4.36952 4.41426 4.49063 4.58689 4.60542 4.62146 4.68933 4.81515 4.84490 4.91534 4.94657 5.05988 5.14776 5.19123 5.23370 5.29113 5.39444 5.42405 5.52240 5.61718 5.73915 5.80908 5.96297 6.35300 6.43390 6.48811 6.97163 7.11028 7.67589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.868 5.868 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.161 3.839 6 H 0.091 0.909 7 C -0.123 4.123 8 C -0.123 4.123 9 C 0.143 3.857 10 H 0.091 0.909 11 N -0.725 5.725 12 C 0.521 3.479 13 O -0.537 6.537 14 C -0.142 4.142 15 C 0.074 3.926 16 O -0.316 6.316 17 C 0.137 3.863 18 C -0.151 4.151 19 C -0.052 4.052 20 C -0.112 4.112 21 C -0.070 4.070 22 O -0.537 6.537 23 Si 0.678 3.322 24 C -0.073 4.073 25 C -0.202 4.202 26 C -0.127 4.127 27 C -0.127 4.127 28 H 0.397 0.603 29 H 0.416 0.584 30 H 0.396 0.604 31 H 0.073 0.927 32 H 0.077 0.923 33 H 0.077 0.923 34 H 0.074 0.926 35 H 0.403 0.597 36 H 0.107 0.893 37 H 0.107 0.893 38 H 0.073 0.927 39 H 0.074 0.926 40 H 0.134 0.866 41 H 0.132 0.868 42 H 0.075 0.925 43 H 0.379 0.621 44 H -0.256 1.256 45 H -0.261 1.261 46 H 0.129 0.871 47 H 0.135 0.865 48 H 0.068 0.932 49 H 0.072 0.928 50 H 0.066 0.934 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.518 -5.557 4.155 7.381 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.436 5.436 2 C 0.403 3.597 3 O -0.470 6.470 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.161 4.161 8 C -0.161 4.161 9 C 0.039 3.961 10 H 0.109 0.891 11 N -0.377 5.377 12 C 0.308 3.692 13 O -0.414 6.414 14 C -0.182 4.182 15 C -0.002 4.002 16 O -0.230 6.230 17 C 0.092 3.908 18 C -0.169 4.169 19 C -0.070 4.070 20 C -0.113 4.113 21 C -0.180 4.180 22 O -0.344 6.344 23 Si 0.579 3.421 24 C -0.091 4.091 25 C -0.220 4.220 26 C -0.166 4.166 27 C -0.167 4.167 28 H 0.225 0.775 29 H 0.248 0.752 30 H 0.230 0.770 31 H 0.091 0.909 32 H 0.095 0.905 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.237 0.763 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.091 0.909 39 H 0.092 0.908 40 H 0.152 0.848 41 H 0.150 0.850 42 H 0.093 0.907 43 H 0.227 0.773 44 H -0.180 1.180 45 H -0.187 1.187 46 H 0.147 0.853 47 H 0.153 0.847 48 H 0.087 0.913 49 H 0.091 0.909 50 H 0.085 0.915 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -2.775 -4.473 3.357 6.243 hybrid contribution 0.341 0.158 -0.222 0.436 sum -2.434 -4.315 3.135 5.863 Atomic orbital electron populations 1.43027 1.05447 1.12685 1.82471 1.15994 0.82087 0.84297 0.77331 1.90989 1.67792 1.30413 1.57837 1.45168 1.07179 1.07135 1.80313 1.20896 0.77954 0.98816 0.96745 0.89116 1.21739 0.95211 0.97171 1.01997 1.21738 0.95293 1.03367 0.95710 1.21072 0.78920 0.99151 0.96962 0.89070 1.46020 1.07326 1.67832 1.16500 1.20291 0.89413 0.76561 0.82975 1.90755 1.70404 1.47145 1.33057 1.21477 0.92166 1.05420 0.99138 1.22426 0.77909 1.02498 0.97364 1.85971 1.21205 1.81494 1.34324 1.18969 0.92202 0.94379 0.85281 1.20479 0.91329 1.05446 0.99681 1.20797 1.00091 0.95049 0.91083 1.19152 0.93052 1.04375 0.94682 1.24715 1.00891 0.92410 0.99945 1.86593 1.63024 1.39713 1.45082 0.95142 0.81670 0.86538 0.78726 1.20735 0.93463 0.97522 0.97366 1.21235 1.00537 1.06484 0.93788 1.21870 0.95256 0.97306 1.02144 1.21892 0.94957 1.03135 0.96678 0.77542 0.75222 0.76996 0.90869 0.90455 0.90435 0.90722 0.76258 0.87448 0.87471 0.90917 0.90807 0.84847 0.85048 0.90666 0.77347 1.18030 1.18669 0.85345 0.84707 0.91302 0.90947 0.91500 0.90822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.79 8.88 27.63 0.25 2.03 16 2 C 0.70 1.18 8.80 -86.92 -0.77 0.41 16 3 O -0.59 -3.94 16.84 5.30 0.09 -3.85 16 4 N -0.74 0.98 5.08 -58.67 -0.30 0.68 16 5 C 0.16 -0.16 2.45 -67.93 -0.17 -0.33 16 6 H 0.09 0.10 7.58 -51.93 -0.39 -0.30 16 7 C -0.12 0.41 5.39 -26.74 -0.14 0.27 16 8 C -0.12 0.43 5.39 -26.74 -0.14 0.29 16 9 C 0.14 -0.23 2.45 -67.93 -0.17 -0.40 16 10 H 0.09 0.01 7.58 -51.93 -0.39 -0.39 16 11 N -0.73 1.63 5.08 -53.81 -0.27 1.35 16 12 C 0.52 0.01 7.79 -10.99 -0.09 -0.08 16 13 O -0.54 -2.10 15.65 5.55 0.09 -2.02 16 14 C -0.14 0.26 6.07 -27.88 -0.17 0.10 16 15 C 0.07 0.03 4.03 37.16 0.15 0.18 16 16 O -0.32 -0.61 10.14 -19.42 -0.20 -0.81 16 17 C 0.14 0.35 6.69 -39.22 -0.26 0.09 16 18 C -0.15 -0.33 9.99 -39.43 -0.39 -0.72 16 19 C -0.05 -0.11 9.60 -39.60 -0.38 -0.49 16 20 C -0.11 -0.24 5.42 -104.60 -0.57 -0.81 16 21 C -0.07 -0.05 2.81 36.01 0.10 0.05 16 22 O -0.54 -1.00 12.74 -35.23 -0.45 -1.45 16 23 Si 0.68 -0.05 29.78 -169.99 -5.06 -5.12 16 24 C -0.07 -0.13 8.66 -39.60 -0.34 -0.47 16 25 C -0.20 -0.40 9.04 -39.43 -0.36 -0.75 16 26 C -0.13 0.05 5.49 -26.76 -0.15 -0.10 16 27 C -0.13 0.01 5.49 -26.76 -0.15 -0.14 16 28 H 0.40 -2.06 8.84 -40.82 -0.36 -2.42 16 29 H 0.42 -0.98 8.93 -40.82 -0.36 -1.34 16 30 H 0.40 -1.65 8.62 -40.82 -0.35 -2.00 16 31 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 34 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.40 -1.95 8.60 -40.82 -0.35 -2.30 16 36 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 37 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 38 H 0.07 0.07 7.62 -51.93 -0.40 -0.33 16 39 H 0.07 0.03 7.62 -51.93 -0.40 -0.36 16 40 H 0.13 0.10 8.06 -52.48 -0.42 -0.32 16 41 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 42 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 43 H 0.38 -0.82 8.74 45.56 0.40 -0.42 16 44 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 45 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 46 H 0.13 -0.01 4.87 -52.49 -0.26 -0.27 16 47 H 0.14 0.09 6.30 -52.48 -0.33 -0.24 16 48 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 49 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 50 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 51 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 LS Contribution 414.78 15.07 6.25 6.25 Total: 0.00 -12.20 414.78 -11.47 -23.67 By element: Atomic # 1 Polarization: -9.96 SS G_CDS: -7.88 Total: -17.84 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -3.99 Total: -2.91 kcal Atomic # 7 Polarization: 4.39 SS G_CDS: -0.33 Total: 4.06 kcal Atomic # 8 Polarization: -7.65 SS G_CDS: -0.47 Total: -8.12 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.06 Total: -5.12 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -12.20 -11.47 -23.67 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.693 kcal (2) G-P(sol) polarization free energy of solvation -12.196 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.888 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.475 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.671 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds