Wall clock time and date at job start Sun Mar 7 2021 07:56:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21578 * 120.00038 * 2 1 4 4 N 1.34776 * 119.99425 * 180.02562 * 2 1 3 5 5 C 1.46507 * 119.99795 * 180.02562 * 4 2 1 6 6 H 1.08999 * 109.46916 * 34.99607 * 5 4 2 7 7 C 1.52997 * 109.47571 * 154.99906 * 5 4 2 8 8 C 1.52989 * 109.47270 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.47347 * 299.99744 * 8 7 5 10 10 H 1.08996 * 109.47213 * 300.00538 * 9 8 7 11 11 N 1.46500 * 109.47622 * 180.02562 * 9 8 7 12 12 C 1.34770 * 120.00235 * 154.99945 * 11 9 8 13 13 O 1.21290 * 120.00032 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00142 * 179.97438 * 12 11 9 15 15 C 1.53004 * 109.47457 * 180.02562 * 14 12 11 16 16 O 1.42894 * 109.47177 * 180.02562 * 15 14 12 17 17 C 1.35899 * 116.99856 * 180.02562 * 16 15 14 18 18 C 1.38729 * 120.05859 * 179.97438 * 17 16 15 19 19 C 1.38150 * 119.95038 * 180.02562 * 18 17 16 20 20 C 1.38265 * 120.04950 * 0.02562 * 19 18 17 21 21 C 1.50703 * 119.94136 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47055 * 300.00303 * 21 20 19 23 23 Si 1.86304 * 109.46911 * 180.02562 * 21 20 19 24 24 C 1.38271 * 120.11462 * 0.25426 * 20 19 18 25 25 C 1.38145 * 120.04946 * 359.44874 * 24 20 19 26 26 C 1.53000 * 109.46926 * 60.00242 * 9 8 7 27 27 C 1.53002 * 109.46929 * 275.00031 * 5 4 2 28 28 H 0.97003 * 120.00192 * 180.02562 * 1 2 3 29 29 H 0.97002 * 119.99933 * 359.97438 * 1 2 3 30 30 H 0.96994 * 120.00655 * 359.97438 * 4 2 1 31 31 H 1.09001 * 109.46829 * 59.99256 * 7 5 4 32 32 H 1.08999 * 109.47102 * 300.00434 * 7 5 4 33 33 H 1.08999 * 109.47378 * 180.02562 * 8 7 5 34 34 H 1.09001 * 109.47767 * 59.99873 * 8 7 5 35 35 H 0.97003 * 119.99591 * 335.00550 * 11 9 8 36 36 H 1.09001 * 109.46816 * 60.00467 * 14 12 11 37 37 H 1.08997 * 109.47326 * 300.00355 * 14 12 11 38 38 H 1.08998 * 109.46749 * 59.99785 * 15 14 12 39 39 H 1.09004 * 109.46620 * 300.00549 * 15 14 12 40 40 H 1.08007 * 120.02564 * 0.04577 * 18 17 16 41 41 H 1.07997 * 119.97457 * 180.02562 * 19 18 17 42 42 H 1.09002 * 109.47152 * 60.00111 * 21 20 19 43 43 H 0.96703 * 114.00193 * 180.02562 * 22 21 20 44 44 H 1.48495 * 110.00011 * 60.00027 * 23 21 20 45 45 H 1.48509 * 109.99497 * 181.32041 * 23 21 20 46 46 H 1.07998 * 119.96980 * 179.70625 * 24 20 19 47 47 H 1.08008 * 120.02012 * 180.29681 * 25 24 20 48 48 H 1.08999 * 109.47406 * 59.99958 * 26 9 8 49 49 H 1.09001 * 109.47183 * 180.02562 * 26 9 8 50 50 H 1.08996 * 109.47077 * 300.00057 * 27 5 4 51 51 H 1.09001 * 109.47216 * 59.99317 * 27 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9557 1.0529 0.0000 4 7 2.0215 -1.1673 -0.0005 5 6 3.4866 -1.1674 0.0000 6 1 3.8497 -0.3259 0.5901 7 6 3.9964 -2.4751 0.6090 8 6 5.5263 -2.4754 0.6090 9 6 6.0363 -2.3491 -0.8280 10 1 5.6728 -3.1905 -1.4178 11 7 7.5013 -2.3500 -0.8281 12 6 8.1749 -2.7489 -1.9252 13 8 7.5681 -3.1068 -2.9126 14 6 9.6818 -2.7493 -1.9255 15 6 10.1915 -3.2416 -3.2815 16 8 11.6204 -3.2425 -3.2816 17 6 12.2371 -3.6554 -4.4200 18 6 13.6224 -3.6810 -4.4899 19 6 14.2469 -4.1007 -5.6485 20 6 13.4924 -4.4945 -6.7381 21 6 14.1762 -4.9513 -8.0010 22 8 14.9929 -3.8947 -8.5094 23 14 12.8927 -5.4095 -9.2713 24 6 12.1115 -4.4644 -6.6731 25 6 11.4824 -4.0514 -5.5147 26 6 5.5266 -1.0413 -1.4370 27 6 3.9971 -1.0407 -1.4367 28 1 -0.4850 -0.8401 0.0004 29 1 -0.4850 0.8401 0.0004 30 1 1.5366 -2.0073 -0.0005 31 1 3.6331 -3.3165 0.0189 32 1 3.6326 -2.5653 1.6325 33 1 5.8895 -3.4072 1.0424 34 1 5.8899 -1.6339 1.1988 35 1 7.9865 -2.0635 -0.0385 36 1 10.0451 -3.4103 -1.1386 37 1 10.0455 -1.7374 -1.7467 38 1 9.8281 -2.5803 -4.0681 39 1 9.8278 -4.2535 -3.4607 40 1 14.2122 -3.3734 -3.6390 41 1 15.3253 -4.1212 -5.7032 42 1 14.7988 -5.8192 -7.7836 43 1 15.4641 -4.1186 -9.3236 44 1 12.0378 -4.2342 -9.5763 45 1 13.5541 -5.8918 -10.5104 46 1 11.5245 -4.7681 -7.5272 47 1 10.4037 -4.0327 -5.4628 48 1 5.8901 -0.1999 -0.8471 49 1 5.8896 -0.9515 -2.4608 50 1 3.6339 -1.8821 -2.0268 51 1 3.6339 -0.1091 -1.8706 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567774_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:56:18 Heat of formation + Delta-G solvation = -126.221889 kcal Electronic energy + Delta-G solvation = -31527.428350 eV Core-core repulsion = 27006.707324 eV Total energy + Delta-G solvation = -4520.721026 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -41.50538 -41.22660 -40.75379 -39.27176 -38.89490 -37.37745 -36.02455 -34.83124 -33.81088 -33.12044 -32.03486 -31.85266 -31.53942 -29.23743 -26.56722 -25.55615 -23.91631 -23.89726 -23.11149 -22.06058 -21.85964 -21.47764 -21.02152 -19.52626 -19.13880 -18.55040 -18.34700 -17.81718 -17.53933 -17.45540 -16.99299 -16.77442 -16.31212 -16.24039 -16.00119 -15.71547 -15.62176 -15.47384 -15.10263 -14.97060 -14.74866 -14.66357 -14.43123 -14.12938 -14.03993 -13.93729 -13.68587 -13.56115 -13.24513 -12.93780 -12.84700 -12.65820 -12.45214 -12.43059 -12.16542 -11.99704 -11.74433 -11.71469 -11.54237 -11.50440 -11.44868 -10.99062 -10.72749 -10.49511 -10.11833 -10.04017 -9.95922 -9.20247 -4.94893 0.27179 0.30564 1.29639 1.55180 1.57120 1.71065 1.93030 1.95391 2.15812 2.51242 2.61931 3.39812 3.56492 3.60589 3.64648 3.67056 3.78830 3.81840 3.91305 3.91531 3.99791 4.02764 4.13590 4.17222 4.25571 4.33319 4.37444 4.38323 4.42841 4.44308 4.48640 4.66272 4.70498 4.71148 4.73011 4.79705 4.95817 4.96897 5.06139 5.10319 5.12445 5.18086 5.26277 5.27840 5.29822 5.49824 5.50048 5.55772 5.71012 5.89522 6.02843 6.31955 6.50251 6.60035 7.09846 7.19488 7.65033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.852 5.852 2 C 0.696 3.304 3 O -0.648 6.648 4 N -0.729 5.729 5 C 0.163 3.837 6 H 0.070 0.930 7 C -0.114 4.114 8 C -0.116 4.116 9 C 0.147 3.853 10 H 0.076 0.924 11 N -0.712 5.712 12 C 0.520 3.480 13 O -0.582 6.582 14 C -0.133 4.133 15 C 0.072 3.928 16 O -0.320 6.320 17 C 0.123 3.877 18 C -0.158 4.158 19 C -0.060 4.060 20 C -0.125 4.125 21 C -0.077 4.077 22 O -0.559 6.559 23 Si 0.754 3.246 24 C -0.082 4.082 25 C -0.209 4.209 26 C -0.121 4.121 27 C -0.121 4.121 28 H 0.414 0.586 29 H 0.418 0.582 30 H 0.413 0.587 31 H 0.083 0.917 32 H 0.090 0.910 33 H 0.093 0.907 34 H 0.082 0.918 35 H 0.419 0.581 36 H 0.130 0.870 37 H 0.123 0.877 38 H 0.061 0.939 39 H 0.070 0.930 40 H 0.144 0.856 41 H 0.142 0.858 42 H 0.098 0.902 43 H 0.394 0.606 44 H -0.304 1.304 45 H -0.283 1.283 46 H 0.141 0.859 47 H 0.141 0.859 48 H 0.069 0.931 49 H 0.048 0.952 50 H 0.069 0.931 51 H 0.043 0.957 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.322 -7.009 5.589 9.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.420 5.420 2 C 0.394 3.606 3 O -0.531 6.531 4 N -0.385 5.385 5 C 0.058 3.942 6 H 0.088 0.912 7 C -0.153 4.153 8 C -0.154 4.154 9 C 0.042 3.958 10 H 0.094 0.906 11 N -0.364 5.364 12 C 0.307 3.693 13 O -0.462 6.462 14 C -0.173 4.173 15 C -0.004 4.004 16 O -0.234 6.234 17 C 0.077 3.923 18 C -0.177 4.177 19 C -0.078 4.078 20 C -0.125 4.125 21 C -0.186 4.186 22 O -0.369 6.369 23 Si 0.661 3.339 24 C -0.100 4.100 25 C -0.228 4.228 26 C -0.160 4.160 27 C -0.161 4.161 28 H 0.245 0.755 29 H 0.251 0.749 30 H 0.250 0.750 31 H 0.102 0.898 32 H 0.108 0.892 33 H 0.112 0.888 34 H 0.101 0.899 35 H 0.256 0.744 36 H 0.148 0.852 37 H 0.141 0.859 38 H 0.079 0.921 39 H 0.088 0.912 40 H 0.162 0.838 41 H 0.159 0.841 42 H 0.116 0.884 43 H 0.245 0.755 44 H -0.232 1.232 45 H -0.210 1.210 46 H 0.159 0.841 47 H 0.159 0.841 48 H 0.087 0.913 49 H 0.067 0.933 50 H 0.088 0.912 51 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges -2.594 -5.985 4.836 8.120 hybrid contribution 0.238 0.655 -0.720 1.002 sum -2.356 -5.329 4.117 7.134 Atomic orbital electron populations 1.42870 1.04262 1.13836 1.81076 1.16297 0.82983 0.84171 0.77172 1.90949 1.69150 1.32528 1.60439 1.45035 1.07148 1.07100 1.79251 1.20852 0.78111 0.99626 0.95651 0.91207 1.21704 0.95260 0.95716 1.02603 1.21715 0.95055 1.04528 0.94093 1.20992 0.79206 0.97459 0.98098 0.90581 1.45924 1.07192 1.66739 1.16528 1.20622 0.90155 0.75841 0.82681 1.90740 1.71356 1.49346 1.34751 1.21443 0.90602 1.06788 0.98420 1.22468 0.77221 1.02174 0.98492 1.85954 1.21837 1.81475 1.34131 1.19162 0.92615 0.94828 0.85668 1.20679 0.91393 1.05408 1.00193 1.20990 1.00701 0.95031 0.91089 1.19421 0.93328 1.04376 0.95401 1.24879 1.01432 0.92748 0.99532 1.86546 1.63446 1.40611 1.46266 0.94272 0.79053 0.83800 0.76816 1.20946 0.93743 0.97555 0.97736 1.21392 1.00999 1.06473 0.93912 1.21790 0.95056 0.98341 1.00862 1.21802 0.95178 1.01629 0.97463 0.75499 0.74940 0.75026 0.89801 0.89158 0.88850 0.89914 0.74401 0.85202 0.85890 0.92089 0.91199 0.83777 0.84067 0.88433 0.75519 1.23239 1.21007 0.84149 0.84110 0.91266 0.93338 0.91188 0.93773 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 3.56 8.88 -184.76 -1.64 1.92 16 2 C 0.70 2.86 8.80 179.05 1.58 4.43 16 3 O -0.65 -9.91 16.84 -3.96 -0.07 -9.98 16 4 N -0.73 1.86 5.08 -457.81 -2.33 -0.47 16 5 C 0.16 -0.25 2.45 44.99 0.11 -0.14 16 6 H 0.07 0.23 7.58 -2.39 -0.02 0.21 16 7 C -0.11 0.91 5.39 30.59 0.16 1.07 16 8 C -0.12 0.97 5.39 30.59 0.16 1.13 16 9 C 0.15 -0.47 2.45 44.99 0.11 -0.36 16 10 H 0.08 0.05 7.58 -2.39 -0.02 0.03 16 11 N -0.71 3.47 5.08 -442.54 -2.25 1.22 16 12 C 0.52 0.17 7.79 87.66 0.68 0.86 16 13 O -0.58 -5.42 15.65 -3.06 -0.05 -5.47 16 14 C -0.13 0.55 6.07 29.85 0.18 0.73 16 15 C 0.07 0.10 4.03 71.98 0.29 0.39 16 16 O -0.32 -1.37 10.14 -92.41 -0.94 -2.31 16 17 C 0.12 0.72 6.69 22.50 0.15 0.87 16 18 C -0.16 -0.74 9.99 22.37 0.22 -0.52 16 19 C -0.06 -0.26 9.60 22.26 0.21 -0.05 16 20 C -0.12 -0.56 5.42 -19.85 -0.11 -0.67 16 21 C -0.08 -0.08 2.81 71.24 0.20 0.12 16 22 O -0.56 -1.97 12.74 -148.98 -1.90 -3.87 16 23 Si 0.75 0.01 29.78 68.60 2.04 2.05 16 24 C -0.08 -0.35 8.66 22.26 0.19 -0.15 16 25 C -0.21 -1.04 9.04 22.37 0.20 -0.84 16 26 C -0.12 -0.10 5.49 30.58 0.17 0.07 16 27 C -0.12 -0.18 5.49 30.58 0.17 -0.01 16 28 H 0.41 -4.68 8.84 -92.71 -0.82 -5.50 16 29 H 0.42 -1.89 8.93 -92.71 -0.83 -2.71 16 30 H 0.41 -3.86 8.62 -92.71 -0.80 -4.66 16 31 H 0.08 -0.79 8.14 -2.39 -0.02 -0.81 16 32 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 33 H 0.09 -0.99 8.14 -2.39 -0.02 -1.00 16 34 H 0.08 -0.77 8.14 -2.39 -0.02 -0.79 16 35 H 0.42 -4.63 8.60 -92.71 -0.80 -5.43 16 36 H 0.13 -1.10 8.14 -2.39 -0.02 -1.12 16 37 H 0.12 -0.87 8.14 -2.39 -0.02 -0.89 16 38 H 0.06 0.22 7.62 -2.39 -0.02 0.20 16 39 H 0.07 0.14 7.62 -2.38 -0.02 0.12 16 40 H 0.14 0.23 8.06 -2.91 -0.02 0.20 16 41 H 0.14 0.23 8.06 -2.91 -0.02 0.21 16 42 H 0.10 -0.34 7.96 -2.39 -0.02 -0.36 16 43 H 0.39 -1.84 8.74 -74.05 -0.65 -2.49 16 44 H -0.30 -2.47 7.11 99.48 0.71 -1.76 16 45 H -0.28 -1.00 7.11 99.48 0.71 -0.29 16 46 H 0.14 0.08 4.87 -2.91 -0.01 0.07 16 47 H 0.14 0.40 6.30 -2.91 -0.02 0.39 16 48 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 49 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 50 H 0.07 0.04 8.14 -2.39 -0.02 0.03 16 51 H 0.04 0.33 8.14 -2.39 -0.02 0.31 16 Total: 0.00 -31.33 414.78 -5.27 -36.60 By element: Atomic # 1 Polarization: -23.81 SS G_CDS: -2.84 Total: -26.65 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: 4.69 Total: 6.95 kcal Atomic # 7 Polarization: 8.89 SS G_CDS: -6.21 Total: 2.67 kcal Atomic # 8 Polarization: -18.67 SS G_CDS: -2.95 Total: -21.62 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: 2.04 Total: 2.05 kcal Total: -31.33 -5.27 -36.60 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.620 kcal (2) G-P(sol) polarization free energy of solvation -31.331 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.602 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds