Wall clock time and date at job start Sun Mar 7 2021 07:57:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21589 * 119.99530 * 2 1 4 4 N 1.34770 * 120.00370 * 180.02562 * 2 1 3 5 5 C 1.46500 * 120.00137 * 179.97438 * 4 2 1 6 6 H 1.09002 * 109.47158 * 34.99851 * 5 4 2 7 7 C 1.53001 * 109.47160 * 154.99500 * 5 4 2 8 8 C 1.53002 * 109.47237 * 179.97438 * 7 5 4 9 9 C 1.52999 * 109.47194 * 300.00445 * 8 7 5 10 10 H 1.09002 * 109.47070 * 299.99914 * 9 8 7 11 11 N 1.46500 * 109.47154 * 179.97438 * 9 8 7 12 12 C 1.34769 * 120.00079 * 154.99807 * 11 9 8 13 13 O 1.21287 * 120.00343 * 0.02562 * 12 11 9 14 14 C 1.50701 * 120.00019 * 179.97438 * 12 11 9 15 15 O 1.42905 * 109.47322 * 179.97438 * 14 12 11 16 16 C 1.35906 * 117.00301 * 180.02562 * 15 14 12 17 17 C 1.38684 * 120.06048 * 0.25738 * 16 15 14 18 18 C 1.38182 * 119.95611 * 180.27477 * 17 16 15 19 19 C 1.38240 * 120.07183 * 359.74396 * 18 17 16 20 20 C 1.50705 * 119.94416 * 180.02562 * 19 18 17 21 21 O 1.42900 * 109.46886 * 244.98204 * 20 19 18 22 22 Si 1.86307 * 109.46899 * 4.97775 * 20 19 18 23 23 C 1.38284 * 120.12048 * 359.97438 * 19 18 17 24 24 C 1.38205 * 120.04312 * 0.02562 * 23 19 18 25 25 Br 1.89100 * 120.03489 * 179.97438 * 24 23 19 26 26 C 1.53003 * 109.47051 * 59.99512 * 9 8 7 27 27 C 1.52994 * 109.47539 * 300.00043 * 26 9 8 28 28 H 0.97000 * 119.99371 * 180.02562 * 1 2 3 29 29 H 0.96996 * 120.00390 * 0.02562 * 1 2 3 30 30 H 0.97000 * 120.00259 * 359.97438 * 4 2 1 31 31 H 1.09002 * 109.46798 * 60.00131 * 7 5 4 32 32 H 1.08997 * 109.47362 * 299.99999 * 7 5 4 33 33 H 1.08997 * 109.47381 * 180.02562 * 8 7 5 34 34 H 1.09002 * 109.47042 * 60.00376 * 8 7 5 35 35 H 0.96997 * 119.99542 * 335.00087 * 11 9 8 36 36 H 1.09004 * 109.46908 * 60.00828 * 14 12 11 37 37 H 1.09000 * 109.47584 * 300.00134 * 14 12 11 38 38 H 1.08001 * 120.01976 * 0.02562 * 17 16 15 39 39 H 1.07998 * 119.96786 * 179.77075 * 18 17 16 40 40 H 1.08995 * 109.47426 * 124.97596 * 20 19 18 41 41 H 0.96701 * 114.00103 * 59.99898 * 21 20 19 42 42 H 1.48502 * 110.00009 * 58.68086 * 22 20 19 43 43 H 1.48500 * 110.00017 * 180.02562 * 22 20 19 44 44 H 1.07997 * 119.98120 * 180.02562 * 23 19 18 45 45 H 1.09002 * 109.46856 * 60.00271 * 26 9 8 46 46 H 1.09000 * 109.46691 * 179.97438 * 26 9 8 47 47 H 1.08994 * 109.47040 * 300.00246 * 27 26 9 48 48 H 1.08994 * 109.47104 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9556 1.0530 0.0000 4 7 2.0217 -1.1671 -0.0005 5 6 3.4867 -1.1670 -0.0011 6 1 3.8503 -0.3253 0.5884 7 6 3.9970 -2.4745 0.6082 8 6 5.5270 -2.4747 0.6070 9 6 6.0360 -2.3489 -0.8304 10 1 5.6721 -3.1907 -1.4196 11 7 7.5010 -2.3486 -0.8314 12 6 8.1742 -2.7477 -1.9286 13 8 7.5672 -3.1068 -2.9154 14 6 9.6812 -2.7467 -1.9299 15 8 10.1568 -3.2082 -3.1960 16 6 11.5040 -3.2689 -3.3642 17 6 12.3506 -2.8973 -2.3306 18 6 13.7201 -2.9544 -2.5059 19 6 14.2470 -3.3866 -3.7087 20 6 15.7410 -3.4484 -3.8966 21 8 16.1337 -2.5117 -4.9019 22 14 16.5868 -3.0270 -2.2909 23 6 13.4057 -3.7635 -4.7394 24 6 12.0353 -3.7082 -4.5693 25 35 10.8850 -4.2229 -5.9792 26 6 5.5256 -1.0415 -1.4396 27 6 3.9957 -1.0413 -1.4385 28 1 -0.4849 -0.8401 0.0004 29 1 -0.4850 0.8400 -0.0004 30 1 1.5368 -2.0072 -0.0005 31 1 3.6335 -3.3162 0.0187 32 1 3.6341 -2.5642 1.6320 33 1 5.8906 -3.4063 1.0406 34 1 5.8909 -1.6329 1.1962 35 1 7.9864 -2.0610 -0.0424 36 1 10.0456 -3.4069 -1.1428 37 1 10.0441 -1.7344 -1.7521 38 1 11.9398 -2.5596 -1.3906 39 1 14.3796 -2.6615 -1.7024 40 1 16.0272 -4.4538 -4.2050 41 1 15.9100 -1.5943 -4.6936 42 1 16.1621 -3.9746 -1.2292 43 1 18.0607 -3.0838 -2.4630 44 1 13.8198 -4.1012 -5.6779 45 1 5.8895 -0.1998 -0.8504 46 1 5.8886 -0.9518 -2.4634 47 1 3.6318 -1.8830 -2.0276 48 1 3.6322 -0.1097 -1.8720 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:57:24 Heat of formation + Delta-G solvation = -104.237120 kcal Electronic energy + Delta-G solvation = -32111.355849 eV Core-core repulsion = 27407.307770 eV Total energy + Delta-G solvation = -4704.048079 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.083 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.77107 -41.27039 -40.65633 -39.43658 -38.73593 -37.26245 -35.99011 -34.74856 -33.75104 -33.53059 -32.01497 -31.95894 -30.71793 -30.12023 -28.56109 -26.38974 -24.33422 -24.01529 -23.50442 -22.43505 -21.86630 -21.62507 -21.24061 -19.65707 -19.22250 -18.60692 -18.35160 -18.12008 -17.59473 -17.32819 -17.10973 -16.52564 -16.31781 -16.22114 -15.99789 -15.78975 -15.69413 -15.43448 -15.19248 -15.04823 -14.83153 -14.75374 -14.40292 -14.17162 -13.97873 -13.87025 -13.71927 -13.61092 -13.35888 -12.79306 -12.54583 -12.37431 -12.29854 -12.27982 -12.17635 -11.93995 -11.79216 -11.61686 -11.58581 -11.23722 -11.05440 -10.89714 -10.65099 -10.50007 -10.20464 -9.99636 -9.98315 -9.33448 -5.13184 -0.09720 0.06514 0.72344 1.21574 1.30874 1.45919 1.54454 1.89086 1.90622 2.27047 2.33538 2.41214 3.32028 3.37106 3.45808 3.49084 3.52236 3.54926 3.59016 3.67124 3.78498 3.79374 3.91740 3.94492 4.02008 4.07704 4.26588 4.27757 4.30375 4.33158 4.43860 4.55138 4.56179 4.59252 4.76264 4.82231 4.89206 4.90257 4.92932 5.14449 5.16196 5.17881 5.20103 5.36477 5.41133 5.51733 5.73547 5.96118 5.96655 6.30179 6.51278 6.96766 7.06498 7.67248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.868 5.868 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.161 3.839 6 H 0.091 0.909 7 C -0.123 4.123 8 C -0.122 4.122 9 C 0.146 3.854 10 H 0.092 0.908 11 N -0.724 5.724 12 C 0.516 3.484 13 O -0.505 6.505 14 C 0.036 3.964 15 O -0.274 6.274 16 C 0.161 3.839 17 C -0.201 4.201 18 C -0.059 4.059 19 C -0.153 4.153 20 C -0.064 4.064 21 O -0.539 6.539 22 Si 0.686 3.314 23 C -0.024 4.024 24 C -0.123 4.123 25 Br -0.025 7.025 26 C -0.127 4.127 27 C -0.128 4.128 28 H 0.397 0.603 29 H 0.416 0.584 30 H 0.396 0.604 31 H 0.073 0.927 32 H 0.077 0.923 33 H 0.077 0.923 34 H 0.075 0.925 35 H 0.402 0.598 36 H 0.097 0.903 37 H 0.098 0.902 38 H 0.141 0.859 39 H 0.137 0.863 40 H 0.115 0.885 41 H 0.380 0.620 42 H -0.256 1.256 43 H -0.253 1.253 44 H 0.144 0.856 45 H 0.069 0.931 46 H 0.073 0.927 47 H 0.067 0.933 48 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.165 -0.016 7.661 7.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.436 5.436 2 C 0.403 3.597 3 O -0.470 6.470 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.162 4.162 8 C -0.161 4.161 9 C 0.042 3.958 10 H 0.111 0.889 11 N -0.378 5.378 12 C 0.300 3.700 13 O -0.378 6.378 14 C -0.042 4.042 15 O -0.185 6.185 16 C 0.112 3.888 17 C -0.220 4.220 18 C -0.077 4.077 19 C -0.154 4.154 20 C -0.174 4.174 21 O -0.344 6.344 22 Si 0.588 3.412 23 C -0.044 4.044 24 C -0.203 4.203 25 Br 0.061 6.939 26 C -0.166 4.166 27 C -0.167 4.167 28 H 0.225 0.775 29 H 0.248 0.752 30 H 0.230 0.770 31 H 0.092 0.908 32 H 0.096 0.904 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.236 0.764 36 H 0.115 0.885 37 H 0.116 0.884 38 H 0.159 0.841 39 H 0.154 0.846 40 H 0.133 0.867 41 H 0.227 0.773 42 H -0.181 1.181 43 H -0.177 1.177 44 H 0.161 0.839 45 H 0.088 0.912 46 H 0.092 0.908 47 H 0.086 0.914 48 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.777 -0.541 6.600 6.667 hybrid contribution -0.469 -0.593 0.536 0.927 sum -1.246 -1.134 7.136 7.332 Atomic orbital electron populations 1.43026 1.05447 1.12689 1.82458 1.15994 0.82088 0.84294 0.77323 1.90991 1.67801 1.30398 1.57857 1.45165 1.07174 1.07148 1.80310 1.20897 0.77982 0.98783 0.96739 0.89091 1.21744 0.95135 0.97238 1.02034 1.21738 0.95364 1.03375 0.95576 1.21086 0.78298 0.99335 0.97083 0.88949 1.45863 1.07431 1.68370 1.16128 1.19941 0.88555 0.77869 0.83603 1.90813 1.69491 1.44936 1.32594 1.22572 0.93350 1.01943 0.86378 1.86288 1.17946 1.80525 1.33731 1.18638 0.82767 0.94339 0.93013 1.21170 0.93838 1.07839 0.99170 1.20907 0.94603 0.95918 0.96277 1.20268 0.96563 1.04179 0.94413 1.25017 0.92707 0.96435 1.03282 1.86526 1.82764 1.19817 1.45297 0.94892 0.80216 0.90356 0.75754 1.20887 0.89595 0.94574 0.99304 1.21165 0.94336 1.11163 0.93648 1.96813 1.63568 1.90370 1.43185 1.21886 0.95310 0.97191 1.02242 1.21901 0.94898 1.03215 0.96676 0.77541 0.75218 0.76987 0.90834 0.90418 0.90416 0.90672 0.76382 0.88538 0.88393 0.84101 0.84618 0.86728 0.77299 1.18134 1.17737 0.83860 0.91245 0.90843 0.91449 0.90758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.85 8.88 27.63 0.25 2.09 16 2 C 0.70 1.09 8.80 -86.92 -0.77 0.32 16 3 O -0.59 -3.83 16.84 5.29 0.09 -3.74 16 4 N -0.74 1.06 5.08 -58.68 -0.30 0.77 16 5 C 0.16 -0.19 2.45 -67.93 -0.17 -0.36 16 6 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 7 C -0.12 0.44 5.39 -26.73 -0.14 0.30 16 8 C -0.12 0.48 5.39 -26.73 -0.14 0.34 16 9 C 0.15 -0.27 2.45 -67.93 -0.17 -0.44 16 10 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 11 N -0.72 1.96 5.08 -53.80 -0.27 1.68 16 12 C 0.52 0.23 7.87 -10.99 -0.09 0.15 16 13 O -0.51 -2.82 16.16 -14.36 -0.23 -3.05 16 14 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 15 O -0.27 -0.60 9.01 -39.35 -0.35 -0.95 16 16 C 0.16 0.21 6.68 -39.20 -0.26 -0.06 16 17 C -0.20 0.32 9.04 -39.44 -0.36 -0.04 16 18 C -0.06 0.11 8.66 -39.60 -0.34 -0.23 16 19 C -0.15 0.08 5.35 -104.60 -0.56 -0.48 16 20 C -0.06 0.06 2.80 36.01 0.10 0.16 16 21 O -0.54 0.18 12.83 -35.23 -0.45 -0.27 16 22 Si 0.69 -1.44 29.80 -169.99 -5.07 -6.50 16 23 C -0.02 -0.02 9.42 -39.58 -0.37 -0.40 16 24 C -0.12 -0.29 6.24 -39.37 -0.25 -0.53 16 25 Br -0.02 -0.09 33.16 -68.01 -2.26 -2.35 16 26 C -0.13 0.07 5.49 -26.73 -0.15 -0.07 16 27 C -0.13 0.02 5.49 -26.73 -0.15 -0.12 16 28 H 0.40 -2.08 8.84 -40.82 -0.36 -2.44 16 29 H 0.42 -1.01 8.93 -40.82 -0.36 -1.37 16 30 H 0.40 -1.68 8.62 -40.82 -0.35 -2.03 16 31 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 33 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 35 H 0.40 -2.40 8.60 -40.82 -0.35 -2.75 16 36 H 0.10 -0.45 7.65 -51.93 -0.40 -0.85 16 37 H 0.10 -0.46 7.67 -51.93 -0.40 -0.86 16 38 H 0.14 -0.67 6.30 -52.49 -0.33 -1.00 16 39 H 0.14 -0.60 4.90 -52.49 -0.26 -0.85 16 40 H 0.12 -0.06 7.96 -51.93 -0.41 -0.48 16 41 H 0.38 -1.60 8.70 45.56 0.40 -1.20 16 42 H -0.26 -0.02 7.11 56.52 0.40 0.39 16 43 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 44 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 45 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 46 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 47 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 48 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 LS Contribution 414.33 15.07 6.24 6.24 Total: 0.00 -13.72 414.33 -12.59 -26.31 By element: Atomic # 1 Polarization: -12.27 SS G_CDS: -6.62 Total: -18.89 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -3.62 Total: -1.34 kcal Atomic # 7 Polarization: 4.87 SS G_CDS: -0.33 Total: 4.54 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -0.95 Total: -8.01 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.07 Total: -6.50 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -13.72 -12.59 -26.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.926 kcal (2) G-P(sol) polarization free energy of solvation -13.723 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.311 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.237 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds