Wall clock time and date at job start Sun Mar 7 2021 07:57:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34773 * 1 3 3 O 1.21592 * 119.99610 * 2 1 4 4 N 1.34770 * 120.00242 * 179.97438 * 2 1 3 5 5 C 1.46500 * 120.00256 * 180.02562 * 4 2 1 6 6 H 1.08998 * 109.46845 * 325.00694 * 5 4 2 7 7 C 1.53006 * 109.47249 * 84.99846 * 5 4 2 8 8 C 1.52997 * 109.47164 * 180.02562 * 7 5 4 9 9 C 1.53002 * 109.46978 * 299.99874 * 8 7 5 10 10 H 1.08992 * 109.47056 * 300.00064 * 9 8 7 11 11 N 1.46505 * 109.46958 * 180.02562 * 9 8 7 12 12 C 1.34777 * 119.99797 * 84.99979 * 11 9 8 13 13 O 1.21278 * 120.00140 * 0.02562 * 12 11 9 14 14 C 1.50697 * 119.99981 * 179.97438 * 12 11 9 15 15 N 1.46499 * 109.47276 * 180.02562 * 14 12 11 16 16 C 1.36831 * 125.06167 * 264.69647 * 15 14 12 17 17 C 1.34243 * 109.93594 * 179.81073 * 16 15 14 18 18 C 1.50703 * 126.49838 * 180.13399 * 17 16 15 19 19 O 1.42904 * 109.46720 * 105.36535 * 18 17 16 20 20 Si 1.86296 * 109.47175 * 345.36217 * 18 17 16 21 21 C 1.46488 * 106.99902 * 0.43998 * 17 16 15 22 22 C 1.39592 * 134.03609 * 179.70256 * 21 17 16 23 23 C 1.36666 * 119.76262 * 180.02562 * 22 21 17 24 24 C 1.38782 * 120.52842 * 359.95558 * 23 22 21 25 25 C 1.37791 * 120.66997 * 0.04830 * 24 23 22 26 26 C 1.37691 * 125.05957 * 85.00563 * 15 14 12 27 27 C 1.52996 * 109.46891 * 60.00410 * 9 8 7 28 28 C 1.52997 * 109.47473 * 205.00145 * 5 4 2 29 29 H 0.97007 * 120.00109 * 179.97438 * 1 2 3 30 30 H 0.97001 * 120.00257 * 0.02562 * 1 2 3 31 31 H 0.97005 * 120.00370 * 0.02562 * 4 2 1 32 32 H 1.09001 * 109.47002 * 60.00085 * 7 5 4 33 33 H 1.09000 * 109.47050 * 300.00351 * 7 5 4 34 34 H 1.09002 * 109.47045 * 180.02562 * 8 7 5 35 35 H 1.09001 * 109.47375 * 59.99966 * 8 7 5 36 36 H 0.97001 * 119.99745 * 265.00017 * 11 9 8 37 37 H 1.08998 * 109.47252 * 300.00615 * 14 12 11 38 38 H 1.09005 * 109.46927 * 60.00159 * 14 12 11 39 39 H 1.08000 * 125.03340 * 359.97438 * 16 15 14 40 40 H 1.09002 * 109.46871 * 225.35880 * 18 17 16 41 41 H 0.96694 * 113.99891 * 299.99710 * 19 18 17 42 42 H 1.48506 * 109.99739 * 179.97438 * 20 18 17 43 43 H 1.48493 * 110.00128 * 301.31703 * 20 18 17 44 44 H 1.07995 * 120.11484 * 0.02562 * 22 21 17 45 45 H 1.07997 * 119.73402 * 179.97438 * 23 22 21 46 46 H 1.08002 * 119.66505 * 180.02562 * 24 23 22 47 47 H 1.08002 * 120.11024 * 179.97438 * 25 24 23 48 48 H 1.09004 * 109.47368 * 179.97438 * 27 9 8 49 49 H 1.09001 * 109.47372 * 59.99964 * 27 9 8 50 50 H 1.09002 * 109.47153 * 59.99757 * 28 5 4 51 51 H 1.09001 * 109.46832 * 299.99948 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9556 1.0531 0.0000 4 7 2.0216 -1.1671 0.0005 5 6 3.4866 -1.1671 0.0011 6 1 3.8501 -0.3254 -0.5883 7 6 3.9961 -1.0410 1.4383 8 6 5.5261 -1.0404 1.4388 9 6 6.0368 -2.3476 0.8295 10 1 5.6736 -3.1894 1.4189 11 7 7.5019 -2.3473 0.8306 12 6 8.1750 -2.7464 1.9279 13 8 7.5680 -3.1062 2.9142 14 6 9.6820 -2.7466 1.9288 15 7 10.1695 -3.2193 3.2269 16 6 10.5286 -2.4133 4.2727 17 6 10.9254 -3.1631 5.3131 18 6 11.3960 -2.6593 6.6532 19 8 10.3722 -2.8701 7.6276 20 14 11.7750 -0.8392 6.5342 21 6 10.8212 -4.5635 4.8963 22 6 11.0891 -5.7838 5.5190 23 6 10.8823 -6.9517 4.8401 24 6 10.4070 -6.9346 3.5363 25 6 10.1361 -5.7415 2.9026 26 6 10.3402 -4.5408 3.5741 27 6 5.5274 -2.4736 -0.6076 28 6 3.9969 -2.4745 -0.6081 29 1 -0.4851 -0.8401 -0.0004 30 1 -0.4850 0.8400 -0.0004 31 1 1.5367 -2.0073 0.0005 32 1 3.6326 -1.8827 2.0278 33 1 3.6326 -0.1096 1.8723 34 1 5.8890 -0.9510 2.4628 35 1 5.8893 -0.1985 0.8494 36 1 7.9873 -2.0598 0.0415 37 1 10.0457 -3.4072 1.1419 38 1 10.0455 -1.7345 1.7504 39 1 10.4950 -1.3339 4.2635 40 1 12.2956 -3.1992 6.9489 41 1 9.5409 -2.4180 7.4287 42 1 12.2396 -0.3301 7.8497 43 1 12.8157 -0.6035 5.5016 44 1 11.4585 -5.8048 6.5336 45 1 11.0901 -7.8955 5.3222 46 1 10.2482 -7.8660 3.0130 47 1 9.7669 -5.7387 1.8876 48 1 5.8916 -3.4047 -1.0420 49 1 5.8906 -1.6317 -1.1970 50 1 3.6340 -2.5644 -1.6319 51 1 3.6334 -3.3162 -0.0186 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567774_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:57:57 Heat of formation + Delta-G solvation = -34.298258 kcal Electronic energy + Delta-G solvation = -33923.550164 eV Core-core repulsion = 29403.619246 eV Total energy + Delta-G solvation = -4519.930918 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.47374 -41.35191 -40.66423 -39.06578 -37.96612 -37.48343 -36.01626 -34.76705 -34.13196 -33.52863 -31.98869 -31.41561 -30.11604 -29.76434 -28.37276 -25.71507 -24.03953 -23.96045 -23.45655 -22.50637 -21.87048 -21.62856 -21.28418 -20.54730 -19.25128 -18.62335 -18.42904 -18.27145 -17.75161 -17.35249 -16.93511 -16.43131 -16.35140 -16.27892 -16.13718 -15.88664 -15.57244 -15.38128 -15.27155 -15.13187 -14.89479 -14.69606 -14.56995 -14.37938 -14.14805 -13.93125 -13.80614 -13.58474 -13.40315 -13.28843 -12.81315 -12.58843 -12.54064 -12.42936 -12.31959 -12.09492 -11.99731 -11.66550 -11.64363 -11.60924 -11.26109 -11.04477 -10.66649 -10.40725 -10.22275 -10.19295 -10.01573 -9.01360 -8.51520 -4.99201 0.28695 0.80338 1.40423 1.41345 1.42581 1.69374 1.74721 1.86176 2.05046 2.14615 2.25372 3.12148 3.38565 3.45689 3.48682 3.51361 3.54665 3.67344 3.77840 3.83116 3.86888 3.89142 3.92648 4.05177 4.09954 4.24231 4.28031 4.30542 4.31866 4.37934 4.53964 4.56835 4.59326 4.72009 4.80180 4.80566 4.87044 4.90707 4.91319 4.99461 5.10490 5.15366 5.18285 5.26106 5.35737 5.49748 5.65253 5.71819 5.81678 5.87230 5.90947 5.94599 6.17266 6.32948 6.38199 6.79871 6.95054 7.02723 7.65579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.868 5.868 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.743 5.743 5 C 0.161 3.839 6 H 0.091 0.909 7 C -0.127 4.127 8 C -0.125 4.125 9 C 0.145 3.855 10 H 0.090 0.910 11 N -0.726 5.726 12 C 0.492 3.508 13 O -0.511 6.511 14 C 0.090 3.910 15 N -0.466 5.466 16 C 0.069 3.931 17 C -0.198 4.198 18 C -0.029 4.029 19 O -0.542 6.542 20 Si 0.682 3.318 21 C -0.087 4.087 22 C -0.066 4.066 23 C -0.146 4.146 24 C -0.097 4.097 25 C -0.128 4.128 26 C 0.109 3.891 27 C -0.122 4.122 28 C -0.123 4.123 29 H 0.397 0.603 30 H 0.416 0.584 31 H 0.396 0.604 32 H 0.066 0.934 33 H 0.074 0.926 34 H 0.072 0.928 35 H 0.068 0.932 36 H 0.402 0.598 37 H 0.117 0.883 38 H 0.123 0.877 39 H 0.171 0.829 40 H 0.110 0.890 41 H 0.377 0.623 42 H -0.254 1.254 43 H -0.256 1.256 44 H 0.122 0.878 45 H 0.122 0.878 46 H 0.124 0.876 47 H 0.114 0.886 48 H 0.076 0.924 49 H 0.074 0.926 50 H 0.077 0.923 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.031 -0.645 -6.879 7.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.436 5.436 2 C 0.403 3.597 3 O -0.471 6.471 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.109 0.891 7 C -0.167 4.167 8 C -0.164 4.164 9 C 0.040 3.960 10 H 0.108 0.892 11 N -0.378 5.378 12 C 0.276 3.724 13 O -0.385 6.385 14 C -0.036 4.036 15 N -0.149 5.149 16 C -0.056 4.056 17 C -0.206 4.206 18 C -0.141 4.141 19 O -0.347 6.347 20 Si 0.584 3.416 21 C -0.091 4.091 22 C -0.084 4.084 23 C -0.165 4.165 24 C -0.116 4.116 25 C -0.148 4.148 26 C 0.004 3.996 27 C -0.161 4.161 28 C -0.162 4.162 29 H 0.225 0.775 30 H 0.248 0.752 31 H 0.230 0.770 32 H 0.085 0.915 33 H 0.092 0.908 34 H 0.090 0.910 35 H 0.087 0.913 36 H 0.236 0.764 37 H 0.135 0.865 38 H 0.141 0.859 39 H 0.188 0.812 40 H 0.127 0.873 41 H 0.225 0.775 42 H -0.179 1.179 43 H -0.180 1.180 44 H 0.140 0.860 45 H 0.140 0.860 46 H 0.142 0.858 47 H 0.132 0.868 48 H 0.095 0.905 49 H 0.093 0.907 50 H 0.096 0.904 51 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -1.820 0.312 -6.078 6.352 hybrid contribution -0.453 -0.905 -0.595 1.174 sum -2.272 -0.593 -6.673 7.074 Atomic orbital electron populations 1.43028 1.05449 1.12699 1.82442 1.15990 0.82087 0.84287 0.77318 1.90991 1.67801 1.30392 1.57870 1.45167 1.07170 1.07154 1.80314 1.20890 0.77993 0.98767 0.96728 0.89109 1.21902 0.94920 1.03174 0.96679 1.21865 0.95291 0.97190 1.02089 1.21068 0.78698 0.99216 0.96976 0.89150 1.46026 1.07421 1.68061 1.16329 1.20977 0.90128 0.77731 0.83569 1.90814 1.69494 1.45359 1.32817 1.21599 0.92126 1.03976 0.85874 1.43191 1.55742 1.04254 1.11712 1.21509 1.01298 0.95968 0.86802 1.20647 1.11461 0.91913 0.96548 1.24324 0.93451 1.10650 0.85627 1.86487 1.25027 1.76529 1.46674 0.95225 0.87466 0.77545 0.81404 1.18946 1.04188 0.92984 0.92955 1.20308 0.98289 0.90452 0.99375 1.20664 1.02731 0.97991 0.95122 1.20817 0.98928 0.96815 0.95073 1.19947 1.05365 0.89735 0.99790 1.18161 1.02224 0.84190 0.94976 1.21743 0.95348 1.03321 0.95647 1.21752 0.95158 0.97227 1.02021 0.77535 0.75210 0.76989 0.91508 0.90770 0.90959 0.91294 0.76421 0.86539 0.85920 0.81229 0.87275 0.77549 1.17889 1.18038 0.85998 0.85964 0.85763 0.86766 0.90501 0.90712 0.90443 0.90869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.98 8.88 27.63 0.25 2.22 16 2 C 0.71 0.96 8.80 -86.93 -0.77 0.19 16 3 O -0.59 -3.69 16.84 5.29 0.09 -3.61 16 4 N -0.74 1.19 5.08 -58.68 -0.30 0.89 16 5 C 0.16 -0.23 2.45 -67.93 -0.17 -0.40 16 6 H 0.09 0.05 7.58 -51.93 -0.39 -0.35 16 7 C -0.13 0.07 5.49 -26.73 -0.15 -0.08 16 8 C -0.13 0.14 5.49 -26.73 -0.15 0.00 16 9 C 0.14 -0.33 2.45 -67.93 -0.17 -0.49 16 10 H 0.09 0.00 7.57 -51.93 -0.39 -0.40 16 11 N -0.73 2.39 5.08 -53.81 -0.27 2.12 16 12 C 0.49 -0.29 7.86 -10.99 -0.09 -0.38 16 13 O -0.51 -2.21 16.08 5.56 0.09 -2.12 16 14 C 0.09 -0.25 6.48 -5.20 -0.03 -0.28 16 15 N -0.47 -0.52 2.27 -115.71 -0.26 -0.78 16 16 C 0.07 0.05 9.89 -16.73 -0.17 -0.11 16 17 C -0.20 -0.51 5.58 -102.71 -0.57 -1.08 16 18 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 19 O -0.54 -1.38 12.88 -35.23 -0.45 -1.83 16 20 Si 0.68 -0.17 30.75 -169.99 -5.23 -5.40 16 21 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 22 C -0.07 -0.26 10.05 -39.64 -0.40 -0.66 16 23 C -0.15 -0.41 9.97 -39.95 -0.40 -0.81 16 24 C -0.10 -0.22 10.01 -39.54 -0.40 -0.62 16 25 C -0.13 -0.33 10.00 -39.43 -0.39 -0.72 16 26 C 0.11 0.38 6.80 -83.99 -0.57 -0.20 16 27 C -0.12 0.50 5.39 -26.71 -0.14 0.35 16 28 C -0.12 0.45 5.39 -26.71 -0.14 0.31 16 29 H 0.40 -2.13 8.84 -40.82 -0.36 -2.49 16 30 H 0.42 -1.07 8.93 -40.82 -0.36 -1.43 16 31 H 0.40 -1.72 8.62 -40.82 -0.35 -2.08 16 32 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.40 -2.52 8.60 -40.82 -0.35 -2.87 16 37 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 38 H 0.12 -0.72 8.12 -51.93 -0.42 -1.15 16 39 H 0.17 -0.47 6.34 -52.49 -0.33 -0.80 16 40 H 0.11 0.24 7.96 -51.93 -0.41 -0.17 16 41 H 0.38 -0.34 8.70 45.56 0.40 0.06 16 42 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 43 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 44 H 0.12 0.38 8.06 -52.49 -0.42 -0.05 16 45 H 0.12 0.11 8.06 -52.49 -0.42 -0.32 16 46 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 47 H 0.11 0.06 8.06 -52.49 -0.42 -0.36 16 48 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 49 H 0.07 -0.34 8.14 -51.93 -0.42 -0.77 16 50 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 51 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 420.38 15.07 6.34 6.34 Total: 0.00 -14.24 420.38 -12.69 -26.93 By element: Atomic # 1 Polarization: -11.12 SS G_CDS: -7.68 Total: -18.80 kcal Atomic # 6 Polarization: -0.69 SS G_CDS: -5.25 Total: -5.95 kcal Atomic # 7 Polarization: 5.03 SS G_CDS: -0.59 Total: 4.45 kcal Atomic # 8 Polarization: -7.28 SS G_CDS: -0.28 Total: -7.56 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.23 Total: -5.40 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -14.24 -12.69 -26.93 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567774_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.370 kcal (2) G-P(sol) polarization free energy of solvation -14.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds