Wall clock time and date at job start Sun Mar 7 2021 11:30:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53000 * 109.46761 * 2 1 4 4 C 1.52995 * 109.47612 * 239.99822 * 2 1 3 5 5 O 1.45198 * 109.47093 * 119.99589 * 2 1 3 6 6 C 1.34230 * 116.99776 * 59.99859 * 5 2 1 7 7 O 1.20831 * 120.00246 * 0.02562 * 6 5 2 8 8 C 1.50706 * 120.00139 * 179.97438 * 6 5 2 9 9 H 1.08993 * 109.46700 * 60.00121 * 8 6 5 10 10 C 1.52999 * 109.46957 * 180.02562 * 8 6 5 11 11 C 1.53006 * 109.46626 * 180.02562 * 10 8 6 12 12 C 1.52997 * 109.47127 * 299.99539 * 11 10 8 13 13 H 1.08996 * 109.46952 * 300.00302 * 12 11 10 14 14 N 1.46496 * 109.46953 * 179.97438 * 12 11 10 15 15 C 1.34781 * 119.99775 * 154.99854 * 14 12 11 16 16 O 1.21699 * 120.00111 * 0.02562 * 15 14 12 17 17 C 1.46676 * 120.00119 * 180.02562 * 15 14 12 18 18 C 1.37874 * 126.23693 * 179.71916 * 17 15 14 19 19 C 1.39831 * 107.08441 * 179.84832 * 18 17 15 20 20 C 1.50708 * 126.06365 * 180.13730 * 19 18 17 21 21 O 1.42898 * 109.47252 * 300.30260 * 20 19 18 22 22 Si 1.86300 * 109.46866 * 180.30228 * 20 19 18 23 23 C 1.35453 * 107.86980 * 0.41424 * 19 18 17 24 24 N 1.35538 * 108.86814 * 359.74209 * 23 19 18 25 25 C 1.53002 * 109.46817 * 60.00361 * 12 11 10 26 26 C 1.52996 * 109.46972 * 299.99733 * 25 12 11 27 27 H 1.08994 * 109.47403 * 300.00318 * 1 2 3 28 28 H 1.08999 * 109.46845 * 60.00297 * 1 2 3 29 29 H 1.08996 * 109.46737 * 180.02562 * 1 2 3 30 30 H 1.09011 * 109.46967 * 179.97438 * 3 2 1 31 31 H 1.08999 * 109.47198 * 299.99487 * 3 2 1 32 32 H 1.09003 * 109.47564 * 60.00324 * 3 2 1 33 33 H 1.09001 * 109.47033 * 300.00749 * 4 2 1 34 34 H 1.09009 * 109.46645 * 59.99795 * 4 2 1 35 35 H 1.08995 * 109.47628 * 179.97438 * 4 2 1 36 36 H 1.08993 * 109.47839 * 60.00178 * 10 8 6 37 37 H 1.09000 * 109.47160 * 299.99740 * 10 8 6 38 38 H 1.09001 * 109.46801 * 59.99811 * 11 10 8 39 39 H 1.09001 * 109.46998 * 179.97438 * 11 10 8 40 40 H 0.97001 * 120.00575 * 335.00735 * 14 12 11 41 41 H 1.08000 * 126.45294 * 359.96062 * 18 17 15 42 42 H 1.08998 * 109.47108 * 60.30645 * 20 19 18 43 43 H 0.96707 * 113.99809 * 300.00134 * 21 20 19 44 44 H 1.48499 * 109.99853 * 179.97438 * 22 20 19 45 45 H 1.48496 * 110.00134 * 301.31825 * 22 20 19 46 46 H 1.07995 * 125.56430 * 179.70359 * 23 19 18 47 47 H 0.96999 * 125.67597 * 180.02562 * 24 23 19 48 48 H 1.08996 * 109.47407 * 60.00219 * 25 12 11 49 49 H 1.09000 * 109.46986 * 179.97438 * 25 12 11 50 50 H 1.09001 * 109.46993 * 180.02562 * 26 25 12 51 51 H 1.09000 * 109.47380 * 299.99696 * 26 25 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6533 -1.9683 1.3380 7 8 0.9566 -2.5027 0.5079 8 6 2.1182 -2.7436 2.5438 9 1 1.7548 -2.2587 3.4497 10 6 1.5715 -4.1709 2.4741 11 6 2.0430 -4.9578 3.6987 12 6 3.5723 -4.9981 3.7212 13 1 3.9363 -5.4829 2.8154 14 7 4.0237 -5.7510 4.8940 15 6 5.2306 -6.3510 4.8860 16 8 5.9455 -6.2668 3.9047 17 6 5.6824 -7.1053 6.0600 18 6 6.8833 -7.7704 6.1888 19 6 6.8998 -8.3453 7.4633 20 6 8.0172 -9.1685 8.0508 21 8 8.2417 -10.3191 7.2336 22 14 7.5510 -9.7101 9.7713 23 6 5.7309 -8.0363 8.0739 24 7 4.9822 -7.2831 7.2317 25 6 4.1190 -3.5707 3.7907 26 6 3.6475 -2.7839 2.5663 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1301 1.4426 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9564 0.8900 33 1 1.6767 -1.7489 -1.2492 34 1 1.6768 -0.2074 -2.1392 35 1 3.1301 -0.7208 -1.2494 36 1 1.9352 -4.6557 1.5682 37 1 0.4820 -4.1423 2.4585 38 1 1.6789 -4.4729 4.6044 39 1 1.6532 -5.9746 3.6494 40 1 3.4540 -5.8179 5.6763 41 1 7.6647 -7.8336 5.4459 42 1 8.9267 -8.5694 8.0924 43 1 7.4724 -10.8994 7.1515 44 1 8.6445 -10.5233 10.3615 45 1 7.2839 -8.5231 10.6226 46 1 5.4423 -8.3410 9.0690 47 1 4.1000 -6.9281 7.4230 48 1 3.7549 -3.0859 4.6965 49 1 5.2085 -3.5994 3.8072 50 1 4.0373 -1.7672 2.6156 51 1 4.0117 -3.2686 1.6605 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17607842_10543058.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:30:38 Heat of formation + Delta-G solvation = -121.985859 kcal Electronic energy + Delta-G solvation = -31273.762698 eV Core-core repulsion = 26946.877412 eV Total energy + Delta-G solvation = -4326.885286 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.51234 -42.00510 -40.67692 -39.12317 -37.76918 -37.61715 -35.49604 -34.90036 -32.67391 -31.99453 -31.44085 -30.25670 -28.36677 -28.35523 -26.65353 -25.52779 -23.98780 -23.83298 -22.39115 -21.45403 -21.09025 -20.70644 -20.43426 -19.89042 -18.21625 -17.73165 -17.46579 -17.20414 -17.13172 -16.84258 -16.41272 -15.95842 -15.77515 -15.53658 -15.46081 -15.26758 -14.97787 -14.82358 -14.67850 -14.47873 -14.42524 -14.17656 -13.89719 -13.66533 -13.50703 -13.47209 -13.34154 -13.15084 -12.94244 -12.87740 -12.80598 -12.59189 -12.34344 -12.30700 -12.22750 -12.04980 -11.95205 -11.71589 -11.47651 -11.34093 -11.12685 -10.80938 -10.38764 -10.21931 -9.93450 -9.31535 -5.04982 0.39998 1.25586 1.33254 1.49868 1.64687 1.66263 1.90899 1.99652 2.03162 2.37258 3.40438 3.43421 3.51834 3.60039 3.72231 3.74531 3.77718 3.83235 3.88295 3.93344 3.95542 4.01927 4.07173 4.14558 4.21912 4.28542 4.36964 4.49905 4.52980 4.58252 4.60567 4.67882 4.73891 4.75225 4.81656 4.86251 4.87013 4.87932 4.90935 4.98371 5.02888 5.05048 5.06060 5.13059 5.17432 5.27621 5.30268 5.34450 5.58237 5.60958 5.78814 6.18600 6.39998 6.71614 6.87414 7.11849 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.349 6.349 6 C 0.468 3.532 7 O -0.501 6.501 8 C -0.082 4.082 9 H 0.109 0.891 10 C -0.100 4.100 11 C -0.125 4.125 12 C 0.144 3.856 13 H 0.095 0.905 14 N -0.730 5.730 15 C 0.591 3.409 16 O -0.522 6.522 17 C -0.059 4.059 18 C -0.075 4.075 19 C -0.211 4.211 20 C -0.033 4.033 21 O -0.542 6.542 22 Si 0.687 3.313 23 C 0.034 3.966 24 N -0.535 5.535 25 C -0.128 4.128 26 C -0.108 4.108 27 H 0.061 0.939 28 H 0.072 0.928 29 H 0.083 0.917 30 H 0.067 0.933 31 H 0.079 0.921 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.072 0.928 35 H 0.062 0.938 36 H 0.078 0.922 37 H 0.080 0.920 38 H 0.071 0.929 39 H 0.078 0.922 40 H 0.394 0.606 41 H 0.150 0.850 42 H 0.111 0.889 43 H 0.377 0.623 44 H -0.256 1.256 45 H -0.258 1.258 46 H 0.175 0.825 47 H 0.418 0.582 48 H 0.068 0.932 49 H 0.077 0.923 50 H 0.082 0.918 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.509 0.845 4.668 7.270 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.267 6.267 6 C 0.311 3.689 7 O -0.388 6.388 8 C -0.102 4.102 9 H 0.127 0.873 10 C -0.138 4.138 11 C -0.163 4.163 12 C 0.040 3.960 13 H 0.113 0.887 14 N -0.380 5.380 15 C 0.379 3.621 16 O -0.397 6.397 17 C -0.171 4.171 18 C -0.101 4.101 19 C -0.218 4.218 20 C -0.145 4.145 21 O -0.347 6.347 22 Si 0.589 3.411 23 C -0.102 4.102 24 N -0.132 5.132 25 C -0.166 4.166 26 C -0.146 4.146 27 H 0.080 0.920 28 H 0.091 0.909 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.102 0.898 34 H 0.091 0.909 35 H 0.081 0.919 36 H 0.097 0.903 37 H 0.098 0.902 38 H 0.090 0.910 39 H 0.097 0.903 40 H 0.227 0.773 41 H 0.168 0.832 42 H 0.128 0.872 43 H 0.224 0.776 44 H -0.181 1.181 45 H -0.183 1.183 46 H 0.192 0.808 47 H 0.255 0.745 48 H 0.087 0.913 49 H 0.095 0.905 50 H 0.101 0.899 51 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -4.556 1.162 4.442 6.468 hybrid contribution -0.569 0.724 0.081 0.924 sum -5.124 1.885 4.523 7.090 Atomic orbital electron populations 1.22492 0.93920 1.04692 1.02933 1.22228 0.94439 0.92366 0.82922 1.21868 1.02339 0.92451 1.03231 1.22493 1.01784 1.03089 0.96697 1.86548 1.69662 1.25249 1.45220 1.23577 0.77219 0.80697 0.87414 1.90597 1.35172 1.69962 1.43099 1.21183 0.98157 0.95699 0.95115 0.87312 1.21376 1.01633 0.92139 0.98637 1.21820 0.93921 1.01532 0.99052 1.21084 0.93950 0.91818 0.89192 0.88737 1.45941 1.18715 1.54472 1.18909 1.17053 0.81184 0.78055 0.85839 1.90886 1.54393 1.61051 1.33389 1.20427 0.96558 1.11412 0.88717 1.21220 0.95657 0.96428 0.96818 1.19909 0.97314 1.07821 0.96763 1.24371 0.98002 0.87765 1.04360 1.86503 1.40893 1.35105 1.72199 0.95141 0.87674 0.83575 0.74708 1.21868 0.92562 0.99116 0.96694 1.41922 1.17099 1.41494 1.12640 1.21925 1.02042 0.94525 0.98135 1.21483 0.91822 1.01976 0.99307 0.91987 0.90865 0.89857 0.91371 0.90184 0.91425 0.89839 0.90888 0.91901 0.90325 0.90158 0.90990 0.90350 0.77307 0.83200 0.87155 0.77555 1.18053 1.18268 0.80762 0.74469 0.91287 0.90460 0.89932 0.90856 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 2 C 0.12 0.11 1.13 -90.62 -0.10 0.01 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 5 O -0.35 -0.59 9.79 -39.26 -0.38 -0.97 16 6 C 0.47 0.71 6.57 36.01 0.24 0.94 16 7 O -0.50 -1.82 11.48 -18.75 -0.22 -2.04 16 8 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 9 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 10 C -0.10 0.16 4.49 -26.73 -0.12 0.04 16 11 C -0.13 0.40 5.39 -26.73 -0.14 0.25 16 12 C 0.14 -0.20 2.45 -67.93 -0.17 -0.36 16 13 H 0.09 0.09 7.58 -51.93 -0.39 -0.31 16 14 N -0.73 1.27 5.07 -55.12 -0.28 0.99 16 15 C 0.59 1.07 7.75 -12.85 -0.10 0.97 16 16 O -0.52 -3.13 16.55 5.19 0.09 -3.04 16 17 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 18 C -0.07 -0.15 10.59 -39.12 -0.41 -0.57 16 19 C -0.21 0.00 5.44 -105.02 -0.57 -0.57 16 20 C -0.03 0.00 3.02 36.01 0.11 0.11 16 21 O -0.54 -0.45 12.88 -35.23 -0.45 -0.91 16 22 Si 0.69 -1.28 30.59 -169.99 -5.20 -6.48 16 23 C 0.03 -0.08 10.45 -16.91 -0.18 -0.26 16 24 N -0.54 1.53 5.99 -9.39 -0.06 1.47 16 25 C -0.13 0.17 5.49 -26.73 -0.15 0.02 16 26 C -0.11 0.13 5.14 -26.73 -0.14 -0.01 16 27 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 30 H 0.07 -0.05 8.14 -51.92 -0.42 -0.47 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 0.24 5.89 -51.93 -0.31 -0.07 16 34 H 0.07 -0.01 8.14 -51.92 -0.42 -0.43 16 35 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 37 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 38 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 39 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 40 H 0.39 -1.91 7.73 -40.82 -0.32 -2.22 16 41 H 0.15 0.48 8.06 -52.49 -0.42 0.06 16 42 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 43 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 44 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 45 H -0.26 -0.02 7.11 56.52 0.40 0.39 16 46 H 0.18 -0.94 6.19 -52.49 -0.32 -1.27 16 47 H 0.42 -2.63 8.19 -40.82 -0.33 -2.97 16 48 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 49 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 50 H 0.08 -0.09 8.11 -51.93 -0.42 -0.51 16 51 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 406.09 15.07 6.12 6.12 Total: 0.00 -9.81 406.09 -10.36 -20.17 By element: Atomic # 1 Polarization: -7.48 SS G_CDS: -8.38 Total: -15.86 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -1.60 Total: 0.54 kcal Atomic # 7 Polarization: 2.80 SS G_CDS: -0.34 Total: 2.47 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -0.97 Total: -6.96 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.20 Total: -6.48 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.81 -10.36 -20.17 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17607842_10543058.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.812 kcal (2) G-P(sol) polarization free energy of solvation -9.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.625 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.361 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.174 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds