Wall clock time and date at job start Sun Mar 7 2021 11:33:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52997 * 109.47400 * 2 1 4 4 C 1.53001 * 109.47462 * 239.99752 * 2 1 3 5 5 O 1.45203 * 109.46782 * 119.99904 * 2 1 3 6 6 C 1.34231 * 117.00207 * 60.00053 * 5 2 1 7 7 O 1.20833 * 119.99583 * 359.97438 * 6 5 2 8 8 C 1.50701 * 120.00244 * 179.97438 * 6 5 2 9 9 H 1.08995 * 109.46623 * 60.00001 * 8 6 5 10 10 C 1.52998 * 109.47145 * 179.97438 * 8 6 5 11 11 C 1.53002 * 109.47005 * 179.97438 * 10 8 6 12 12 C 1.52999 * 109.47185 * 299.99749 * 11 10 8 13 13 H 1.08997 * 109.47148 * 300.00394 * 12 11 10 14 14 N 1.46492 * 109.46977 * 179.97438 * 12 11 10 15 15 C 1.34777 * 119.99882 * 155.00526 * 14 12 11 16 16 O 1.21552 * 120.00006 * 359.97438 * 15 14 12 17 17 C 1.47838 * 120.00084 * 180.02562 * 15 14 12 18 18 C 1.39523 * 120.56191 * 359.97438 * 17 15 14 19 19 N 1.31687 * 120.56943 * 179.97438 * 18 17 15 20 20 C 1.31934 * 121.88060 * 0.02562 * 19 18 17 21 21 C 1.38351 * 121.07621 * 0.02562 * 20 19 18 22 22 C 1.50704 * 120.34427 * 179.97438 * 21 20 19 23 23 O 1.42898 * 109.47190 * 245.00120 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 5.00333 * 22 21 20 25 25 C 1.38355 * 119.30666 * 359.97438 * 21 20 19 26 26 C 1.53009 * 109.46604 * 60.00334 * 12 11 10 27 27 C 1.52997 * 109.47106 * 299.99393 * 26 12 11 28 28 H 1.08990 * 109.47164 * 300.00266 * 1 2 3 29 29 H 1.09004 * 109.46774 * 60.00455 * 1 2 3 30 30 H 1.09003 * 109.46915 * 179.97438 * 1 2 3 31 31 H 1.08996 * 109.47350 * 179.97438 * 3 2 1 32 32 H 1.09000 * 109.47239 * 300.00349 * 3 2 1 33 33 H 1.09002 * 109.46831 * 59.99492 * 3 2 1 34 34 H 1.09005 * 109.46825 * 300.00449 * 4 2 1 35 35 H 1.08995 * 109.47082 * 59.99929 * 4 2 1 36 36 H 1.08992 * 109.47316 * 180.02562 * 4 2 1 37 37 H 1.09002 * 109.47014 * 60.00235 * 10 8 6 38 38 H 1.08998 * 109.47372 * 300.00461 * 10 8 6 39 39 H 1.09002 * 109.46767 * 180.02562 * 11 10 8 40 40 H 1.08995 * 109.46672 * 60.00105 * 11 10 8 41 41 H 0.97001 * 120.00651 * 335.00833 * 14 12 11 42 42 H 1.08003 * 119.71222 * 359.97438 * 18 17 15 43 43 H 1.08002 * 119.45808 * 179.71896 * 20 19 18 44 44 H 1.09002 * 109.46795 * 124.99920 * 22 21 20 45 45 H 0.96697 * 113.99966 * 59.99806 * 23 22 21 46 46 H 1.48492 * 110.00256 * 58.68048 * 24 22 21 47 47 H 1.48506 * 109.99693 * 179.97438 * 24 22 21 48 48 H 1.08001 * 120.85625 * 180.02562 * 25 21 20 49 49 H 1.08997 * 109.47319 * 60.00165 * 26 12 11 50 50 H 1.09005 * 109.46507 * 180.02562 * 26 12 11 51 51 H 1.08997 * 109.47661 * 300.00562 * 27 26 12 52 52 H 1.08996 * 109.47384 * 180.02562 * 27 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6533 -1.9684 1.3380 7 8 0.9559 -2.5025 0.5083 8 6 2.1182 -2.7438 2.5437 9 1 1.7547 -2.2588 3.4497 10 6 1.5705 -4.1707 2.4747 11 6 2.0430 -4.9580 3.6986 12 6 3.5722 -4.9992 3.7193 13 1 3.9349 -5.4842 2.8130 14 7 4.0246 -5.7525 4.8914 15 6 5.2311 -6.3531 4.8820 16 8 5.9437 -6.2701 3.9007 17 6 5.6874 -7.1139 6.0646 18 6 4.8788 -7.2172 7.1970 19 7 5.2849 -7.8952 8.2503 20 6 6.4582 -8.4979 8.2812 21 6 7.3185 -8.4419 7.1992 22 6 8.6551 -9.1360 7.2525 23 8 9.6999 -8.1626 7.1976 24 14 8.7899 -10.1028 8.8392 25 6 6.9389 -7.7420 6.0677 26 6 4.1199 -3.5722 3.7883 27 6 3.6475 -2.7849 2.5644 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1301 1.4424 0.0005 32 1 1.6768 1.9563 -0.8899 33 1 1.6767 1.9563 0.8900 34 1 1.6767 -1.7490 -1.2492 35 1 1.6768 -0.2075 -2.1392 36 1 3.1301 -0.7217 -1.2489 37 1 1.9336 -4.6558 1.5687 38 1 0.4810 -4.1414 2.4595 39 1 1.6531 -5.9747 3.6492 40 1 1.6802 -4.4730 4.6048 41 1 3.4558 -5.8192 5.6743 42 1 3.9115 -6.7370 7.2097 43 1 6.7538 -9.0397 9.1675 44 1 8.7460 -9.8149 6.4046 45 1 9.6809 -7.5239 7.9234 46 1 7.6901 -11.0970 8.9232 47 1 10.1034 -10.7926 8.9037 48 1 7.5907 -7.6824 5.2086 49 1 3.7572 -3.0872 4.6946 50 1 5.2095 -3.6015 3.8026 51 1 4.0102 -3.2698 1.6582 52 1 4.0380 -1.7684 2.6133 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17607842_13287814.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:33:24 Heat of formation + Delta-G solvation = -127.281962 kcal Electronic energy + Delta-G solvation = -32734.621915 eV Core-core repulsion = 28279.280832 eV Total energy + Delta-G solvation = -4455.341083 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.09759 -41.86871 -40.66173 -39.20814 -38.00211 -37.77025 -35.55569 -34.92371 -33.79446 -33.28455 -31.98466 -30.86234 -28.36017 -28.35171 -27.35625 -26.34164 -24.78878 -23.95433 -23.86521 -22.59464 -21.61569 -21.10861 -20.43162 -19.26105 -18.31221 -18.19231 -18.02406 -17.73710 -17.49235 -17.05597 -16.88086 -16.51278 -16.19330 -15.86979 -15.71801 -15.49050 -15.25252 -15.10212 -14.84781 -14.69344 -14.54022 -14.40719 -14.23896 -14.22299 -13.70422 -13.55983 -13.49264 -13.33815 -13.14705 -12.93877 -12.87120 -12.80764 -12.77622 -12.58367 -12.33328 -12.29447 -12.17330 -12.04435 -11.70918 -11.48696 -11.33738 -11.32013 -11.07221 -10.81968 -10.64702 -10.58316 -10.39502 -10.16242 -5.17961 -0.61172 -0.05690 1.10192 1.26557 1.50082 1.66738 1.69498 1.84122 1.92965 2.60234 2.97762 3.27524 3.34575 3.41453 3.45508 3.52099 3.57042 3.67824 3.70818 3.73726 3.77396 3.84150 3.93820 3.96101 4.05876 4.08544 4.14454 4.16096 4.23299 4.30201 4.39157 4.50869 4.53580 4.58749 4.62265 4.74483 4.75567 4.78212 4.82429 4.86800 4.87583 4.89130 4.90632 4.99315 5.03435 5.06442 5.13177 5.17673 5.25102 5.28291 5.30704 5.35872 5.61670 6.29445 6.40830 6.58570 6.88288 7.03963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.183 4.183 5 O -0.349 6.349 6 C 0.468 3.532 7 O -0.501 6.501 8 C -0.083 4.083 9 H 0.110 0.890 10 C -0.100 4.100 11 C -0.126 4.126 12 C 0.142 3.858 13 H 0.094 0.906 14 N -0.721 5.721 15 C 0.566 3.434 16 O -0.526 6.526 17 C -0.189 4.189 18 C 0.140 3.860 19 N -0.478 5.478 20 C 0.129 3.871 21 C -0.179 4.179 22 C -0.064 4.064 23 O -0.536 6.536 24 Si 0.687 3.313 25 C 0.012 3.988 26 C -0.128 4.128 27 C -0.108 4.108 28 H 0.061 0.939 29 H 0.072 0.928 30 H 0.083 0.917 31 H 0.067 0.933 32 H 0.079 0.921 33 H 0.067 0.933 34 H 0.083 0.917 35 H 0.072 0.928 36 H 0.062 0.938 37 H 0.077 0.923 38 H 0.080 0.920 39 H 0.079 0.921 40 H 0.074 0.926 41 H 0.400 0.600 42 H 0.162 0.838 43 H 0.163 0.837 44 H 0.120 0.880 45 H 0.380 0.620 46 H -0.253 1.253 47 H -0.248 1.248 48 H 0.152 0.848 49 H 0.071 0.929 50 H 0.076 0.924 51 H 0.072 0.928 52 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.585 2.603 4.607 5.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.081 3.919 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.267 6.267 6 C 0.311 3.689 7 O -0.389 6.389 8 C -0.102 4.102 9 H 0.128 0.872 10 C -0.138 4.138 11 C -0.164 4.164 12 C 0.038 3.962 13 H 0.112 0.888 14 N -0.373 5.373 15 C 0.352 3.648 16 O -0.403 6.403 17 C -0.194 4.194 18 C -0.019 4.019 19 N -0.185 5.185 20 C -0.027 4.027 21 C -0.182 4.182 22 C -0.176 4.176 23 O -0.341 6.341 24 Si 0.587 3.413 25 C -0.015 4.015 26 C -0.166 4.166 27 C -0.146 4.146 28 H 0.080 0.920 29 H 0.091 0.909 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.098 0.902 33 H 0.086 0.914 34 H 0.101 0.899 35 H 0.091 0.909 36 H 0.081 0.919 37 H 0.096 0.904 38 H 0.099 0.901 39 H 0.097 0.903 40 H 0.092 0.908 41 H 0.236 0.764 42 H 0.179 0.821 43 H 0.180 0.820 44 H 0.137 0.863 45 H 0.228 0.772 46 H -0.177 1.177 47 H -0.173 1.173 48 H 0.170 0.830 49 H 0.089 0.911 50 H 0.095 0.905 51 H 0.091 0.909 52 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.578 1.354 4.165 4.655 hybrid contribution -0.074 0.156 -1.102 1.115 sum -1.652 1.510 3.063 3.793 Atomic orbital electron populations 1.22494 0.93915 1.04701 1.02936 1.22226 0.94445 0.92362 0.82915 1.21864 1.02326 0.92454 1.03240 1.22492 1.01765 1.03086 0.96717 1.86549 1.69671 1.25248 1.45206 1.23587 0.77222 0.80693 0.87413 1.90597 1.35144 1.69985 1.43127 1.21189 0.98122 0.95717 0.95145 0.87211 1.21378 1.01666 0.92132 0.98617 1.21827 0.93794 1.01629 0.99159 1.21113 0.94086 0.91849 0.89117 0.88820 1.45959 1.18569 1.53654 1.19118 1.18004 0.81488 0.78591 0.86720 1.90826 1.54358 1.60871 1.34225 1.21051 0.97617 1.04047 0.96657 1.23034 0.98528 0.92921 0.87415 1.67718 1.15663 1.08028 1.27100 1.22876 0.89027 0.94005 0.96761 1.21437 0.99083 1.02009 0.95638 1.25032 0.84135 0.96005 1.12401 1.86551 1.48975 1.45073 1.53479 0.94886 0.81312 0.83029 0.82038 1.21642 0.93320 0.89015 0.97487 1.21929 1.01959 0.94479 0.98267 1.21482 0.91856 1.01971 0.99265 0.91960 0.90885 0.89853 0.91377 0.90198 0.91407 0.89857 0.90893 0.91919 0.90408 0.90116 0.90280 0.90750 0.76429 0.82136 0.82017 0.86293 0.77212 1.17741 1.17260 0.83043 0.91064 0.90519 0.90931 0.89911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 2 C 0.12 0.11 1.13 -90.62 -0.10 0.00 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 5 O -0.35 -0.57 9.79 -39.26 -0.38 -0.95 16 6 C 0.47 0.69 6.56 36.01 0.24 0.92 16 7 O -0.50 -1.82 11.48 -18.76 -0.22 -2.04 16 8 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 9 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 10 C -0.10 0.16 4.49 -26.73 -0.12 0.04 16 11 C -0.13 0.40 5.39 -26.73 -0.14 0.25 16 12 C 0.14 -0.22 2.46 -67.93 -0.17 -0.38 16 13 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 14 N -0.72 1.33 5.03 -54.75 -0.28 1.05 16 15 C 0.57 0.69 7.75 -12.33 -0.10 0.59 16 16 O -0.53 -2.66 16.08 5.32 0.09 -2.58 16 17 C -0.19 -0.04 5.89 -104.82 -0.62 -0.66 16 18 C 0.14 -0.15 10.71 -17.14 -0.18 -0.34 16 19 N -0.48 -0.11 10.35 -12.91 -0.13 -0.24 16 20 C 0.13 -0.12 9.84 -17.47 -0.17 -0.29 16 21 C -0.18 0.12 5.35 -104.54 -0.56 -0.44 16 22 C -0.06 0.08 2.82 36.01 0.10 0.18 16 23 O -0.54 0.32 12.84 -35.23 -0.45 -0.13 16 24 Si 0.69 -1.59 29.83 -169.99 -5.07 -6.66 16 25 C 0.01 0.01 9.38 -38.87 -0.36 -0.36 16 26 C -0.13 0.20 5.49 -26.73 -0.15 0.06 16 27 C -0.11 0.15 5.13 -26.73 -0.14 0.01 16 28 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.08 0.23 5.89 -51.93 -0.31 -0.07 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 38 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 39 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 40 H 0.07 -0.33 8.14 -51.93 -0.42 -0.76 16 41 H 0.40 -1.85 6.67 -40.82 -0.27 -2.12 16 42 H 0.16 -0.70 6.42 -52.48 -0.34 -1.04 16 43 H 0.16 -0.53 4.91 -52.49 -0.26 -0.79 16 44 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 45 H 0.38 -1.74 8.70 45.56 0.40 -1.35 16 46 H -0.25 0.01 7.11 56.52 0.40 0.41 16 47 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 48 H 0.15 0.23 7.74 -52.49 -0.41 -0.18 16 49 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 50 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 51 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 52 H 0.08 -0.11 8.11 -51.93 -0.42 -0.53 16 LS Contribution 412.15 15.07 6.21 6.21 Total: 0.00 -9.14 412.15 -10.25 -19.38 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -8.25 Total: -14.23 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -1.76 Total: 0.19 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.41 Total: 0.81 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -0.97 Total: -5.70 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.07 Total: -6.66 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -9.14 -10.25 -19.38 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17607842_13287814.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.897 kcal (2) G-P(sol) polarization free energy of solvation -9.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.249 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.385 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds