Wall clock time and date at job start Sun Mar 7 2021 13:25:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37675 * 119.95370 * 2 1 4 4 C 1.39763 * 119.90512 * 179.73172 * 3 2 1 5 5 C 1.47604 * 120.08404 * 180.29407 * 4 3 2 6 6 O 1.21582 * 119.99952 * 180.25077 * 5 4 3 7 7 N 1.34778 * 120.00116 * 0.25500 * 5 4 3 8 8 C 1.46498 * 120.00108 * 180.02562 * 7 5 4 9 9 C 1.53578 * 109.46976 * 274.29442 * 8 7 5 10 10 C 1.55127 * 111.30174 * 190.88630 * 9 8 7 11 11 Si 1.89339 * 101.32336 * 28.66213 * 10 9 8 12 12 C 1.86305 * 111.45681 * 239.10536 * 11 10 9 13 13 C 1.86296 * 111.51652 * 114.11971 * 11 10 9 14 14 C 1.55913 * 109.47627 * 154.29528 * 8 7 5 15 15 C 1.39707 * 119.82536 * 0.54474 * 4 3 2 16 16 C 1.37721 * 119.91055 * 359.73078 * 15 4 3 17 17 C 1.50702 * 119.95474 * 180.02562 * 16 15 4 18 18 O 1.42901 * 109.47112 * 104.97833 * 17 16 15 19 19 Si 1.86301 * 109.47002 * 344.97778 * 17 16 15 20 20 H 1.48504 * 109.47246 * 60.00201 * 19 17 16 21 21 H 1.48506 * 109.46930 * 179.97438 * 19 17 16 22 22 H 1.48499 * 109.47299 * 299.99583 * 19 17 16 23 23 C 1.38973 * 120.09028 * 359.97438 * 16 15 4 24 24 O 1.35712 * 119.91263 * 179.97438 * 23 16 15 25 25 H 1.09001 * 109.46953 * 269.72127 * 1 2 3 26 26 H 1.09000 * 109.47318 * 29.71724 * 1 2 3 27 27 H 1.09000 * 109.47161 * 149.72355 * 1 2 3 28 28 H 1.07998 * 120.04607 * 359.97438 * 3 2 1 29 29 H 0.97000 * 120.00001 * 359.97438 * 7 5 4 30 30 H 1.08998 * 109.47010 * 34.29162 * 8 7 5 31 31 H 1.08994 * 109.12419 * 311.42079 * 9 8 7 32 32 H 1.08998 * 109.12381 * 70.45720 * 9 8 7 33 33 H 1.09001 * 111.09392 * 270.64024 * 10 9 8 34 34 H 1.08998 * 111.06088 * 146.66474 * 10 9 8 35 35 H 1.08997 * 109.47150 * 169.79145 * 12 11 10 36 36 H 1.08994 * 109.47242 * 289.79457 * 12 11 10 37 37 H 1.09002 * 109.46855 * 49.79247 * 12 11 10 38 38 H 1.08996 * 109.47272 * 310.17115 * 13 11 10 39 39 H 1.09001 * 109.47138 * 70.17746 * 13 11 10 40 40 H 1.08998 * 109.47042 * 190.17469 * 13 11 10 41 41 H 1.09000 * 111.42725 * 278.17633 * 14 8 7 42 42 H 1.08997 * 111.42535 * 43.06255 * 14 8 7 43 43 H 1.08000 * 120.04073 * 179.70484 * 15 4 3 44 44 H 1.08995 * 109.47306 * 224.97530 * 17 16 15 45 45 H 0.96708 * 113.99656 * 299.99862 * 18 17 16 46 46 H 0.96694 * 113.99807 * 270.02575 * 24 23 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1945 1.1929 0.0000 4 6 3.5921 1.1917 0.0057 5 6 4.3330 2.4683 0.0122 6 8 5.5489 2.4654 0.0126 7 7 3.6619 3.6370 0.0180 8 6 4.3973 4.9040 0.0239 9 6 4.7482 5.2854 1.4696 10 6 5.2826 6.7392 1.5551 11 14 4.3998 7.5466 0.0875 12 6 5.6158 8.2459 -1.1385 13 6 3.1864 8.8437 0.6496 14 6 3.5126 6.0215 -0.6081 15 6 4.2859 -0.0209 -0.0002 16 6 3.5909 -1.2098 -0.0059 17 6 4.3383 -2.5184 -0.0117 18 8 4.2717 -3.1107 1.2871 19 14 6.1196 -2.2141 -0.4649 20 1 6.7337 -1.2977 0.5292 21 1 6.8563 -3.5036 -0.4700 22 1 6.1888 -1.5987 -1.8146 23 6 2.2012 -1.2045 -0.0054 24 8 1.5199 -2.3782 -0.0116 25 1 -0.3633 -0.0050 1.0277 26 1 -0.3634 0.8925 -0.5094 27 1 -0.3633 -0.8875 -0.5181 28 1 1.6545 2.1281 -0.0004 29 1 2.6919 3.6393 0.0174 30 1 5.3138 4.7948 -0.5557 31 1 3.8562 5.1951 2.0893 32 1 5.5113 4.6028 1.8438 33 1 6.3645 6.7677 1.4250 34 1 4.9908 7.2092 2.4942 35 1 5.0888 8.5375 -2.0470 36 1 6.1059 9.1186 -0.7068 37 1 6.3642 7.4908 -1.3790 38 1 2.5477 8.4300 1.4299 39 1 3.7295 9.7034 1.0422 40 1 2.5722 9.1567 -0.1947 41 1 3.5575 5.9968 -1.6969 42 1 2.4835 5.9626 -0.2540 43 1 5.3659 -0.0258 -0.0007 44 1 3.8876 -3.1911 -0.7413 45 1 4.6555 -2.5660 1.9879 46 1 1.3224 -2.7136 -0.8967 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17626288_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:25:36 Heat of formation + Delta-G solvation = -135.933401 kcal Electronic energy + Delta-G solvation = -25412.311805 eV Core-core repulsion = 21810.873564 eV Total energy + Delta-G solvation = -3601.438240 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 323.151 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.69660 -40.42791 -37.86561 -37.62674 -37.07140 -34.10296 -33.68041 -31.61915 -29.52066 -29.24910 -28.57781 -28.11122 -26.87589 -25.30461 -24.18504 -22.16089 -21.49781 -21.26717 -19.64320 -18.71929 -18.11449 -17.41564 -16.89753 -16.53073 -16.16385 -15.98412 -15.84997 -15.58816 -15.30357 -14.76351 -14.62745 -14.41477 -14.32555 -14.10102 -14.04586 -14.01844 -13.74205 -13.59662 -13.37456 -13.35309 -13.07637 -13.05996 -12.85401 -12.74167 -12.50998 -12.38542 -12.14656 -11.73120 -11.68414 -11.60849 -11.10001 -10.97567 -10.65888 -10.54529 -10.38378 -10.05668 -9.97527 -9.65246 -0.37322 0.05550 1.13600 1.41191 1.46011 1.54418 1.70035 1.74929 1.77904 1.93874 2.15669 2.49336 2.61400 3.04452 3.34994 3.53884 3.57460 3.70218 3.81856 3.95119 4.06741 4.16387 4.25251 4.30263 4.41237 4.45926 4.47590 4.52602 4.60408 4.61555 4.63795 4.65592 4.66652 4.67516 4.90385 4.97986 4.98601 5.05402 5.08292 5.23394 5.25881 5.27507 5.33180 5.37750 5.45353 5.49288 5.56847 6.48348 6.55185 6.57313 7.20931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.118 4.118 3 C -0.066 4.066 4 C -0.137 4.137 5 C 0.558 3.442 6 O -0.535 6.535 7 N -0.717 5.717 8 C 0.146 3.854 9 C -0.127 4.127 10 C -0.396 4.396 11 Si 0.978 3.022 12 C -0.444 4.444 13 C -0.442 4.442 14 C -0.411 4.411 15 C -0.059 4.059 16 C -0.152 4.152 17 C -0.068 4.068 18 O -0.530 6.530 19 Si 0.938 3.062 20 H -0.246 1.246 21 H -0.249 1.249 22 H -0.247 1.247 23 C 0.162 3.838 24 O -0.482 6.482 25 H 0.076 0.924 26 H 0.069 0.931 27 H 0.072 0.928 28 H 0.132 0.868 29 H 0.400 0.600 30 H 0.092 0.908 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.079 0.921 34 H 0.080 0.920 35 H 0.070 0.930 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.071 0.929 39 H 0.071 0.929 40 H 0.070 0.930 41 H 0.085 0.915 42 H 0.086 0.914 43 H 0.141 0.859 44 H 0.116 0.884 45 H 0.375 0.625 46 H 0.393 0.607 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.212 3.161 -1.876 5.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.118 4.118 3 C -0.085 4.085 4 C -0.140 4.140 5 C 0.345 3.655 6 O -0.412 6.412 7 N -0.369 5.369 8 C 0.042 3.958 9 C -0.166 4.166 10 C -0.483 4.483 11 Si 1.174 2.826 12 C -0.553 4.553 13 C -0.550 4.550 14 C -0.496 4.496 15 C -0.078 4.078 16 C -0.153 4.153 17 C -0.178 4.178 18 O -0.334 6.334 19 Si 0.760 3.240 20 H -0.170 1.170 21 H -0.173 1.173 22 H -0.170 1.170 23 C 0.116 3.884 24 O -0.293 6.293 25 H 0.095 0.905 26 H 0.088 0.912 27 H 0.090 0.910 28 H 0.150 0.850 29 H 0.235 0.765 30 H 0.110 0.890 31 H 0.083 0.917 32 H 0.087 0.913 33 H 0.098 0.902 34 H 0.099 0.901 35 H 0.089 0.911 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.090 0.910 40 H 0.089 0.911 41 H 0.104 0.896 42 H 0.104 0.896 43 H 0.158 0.842 44 H 0.134 0.866 45 H 0.222 0.778 46 H 0.251 0.749 Dipole moment (debyes) X Y Z Total from point charges -2.731 2.914 -1.856 4.403 hybrid contribution -0.795 0.195 -0.047 0.820 sum -3.526 3.109 -1.903 5.071 Atomic orbital electron populations 1.20696 0.89663 1.03132 1.03139 1.20218 0.97306 0.92109 1.02186 1.21100 0.92566 0.97840 0.97009 1.19844 0.93517 0.93476 1.07212 1.18211 0.87305 0.83749 0.76190 1.90801 1.13330 1.87541 1.49551 1.46066 1.10264 1.05373 1.75180 1.21663 0.95797 0.81911 0.96385 1.22046 1.01565 0.96990 0.95998 1.26435 1.06565 1.01678 1.13626 0.80368 0.67619 0.66864 0.67703 1.26032 1.11174 1.06891 1.11157 1.26003 1.11019 1.11998 1.05980 1.27155 1.04689 1.12499 1.05244 1.21126 1.00755 0.90445 0.95454 1.20636 0.94005 0.95912 1.04720 1.24795 1.09798 0.93415 0.89837 1.86566 1.84457 1.46524 1.15903 0.85861 0.75307 0.80943 0.81918 1.17005 1.17309 1.17015 1.18278 0.88722 0.85248 0.96112 1.84818 1.75598 1.35655 1.33192 0.90540 0.91227 0.90956 0.85006 0.76465 0.88961 0.91685 0.91265 0.90248 0.90069 0.91063 0.90922 0.90914 0.91002 0.90979 0.91051 0.89628 0.89572 0.84168 0.86610 0.77778 0.74933 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.23 9.79 36.01 0.35 0.58 16 2 C -0.12 0.03 5.89 -104.54 -0.62 -0.58 16 3 C -0.07 0.04 9.18 -39.22 -0.36 -0.32 16 4 C -0.14 -0.23 5.88 -104.96 -0.62 -0.85 16 5 C 0.56 1.66 7.74 -12.44 -0.10 1.57 16 6 O -0.53 -3.52 15.99 5.29 0.08 -3.44 16 7 N -0.72 -0.06 5.03 -53.03 -0.27 -0.33 16 8 C 0.15 -0.01 2.46 -66.08 -0.16 -0.17 16 9 C -0.13 -0.02 5.65 -25.31 -0.14 -0.16 16 10 C -0.40 0.53 5.85 38.28 0.22 0.75 16 11 Si 0.98 -3.25 13.36 -169.99 -2.27 -5.52 16 12 C -0.44 0.89 8.65 101.05 0.87 1.76 16 13 C -0.44 1.15 8.65 101.05 0.87 2.02 16 14 C -0.41 1.06 5.47 38.71 0.21 1.27 16 15 C -0.06 -0.12 8.20 -39.22 -0.32 -0.44 16 16 C -0.15 -0.16 5.27 -104.54 -0.55 -0.71 16 17 C -0.07 -0.02 2.37 36.01 0.09 0.06 16 18 O -0.53 -0.83 12.88 -35.23 -0.45 -1.29 16 19 Si 0.94 0.69 25.49 -169.99 -4.33 -3.64 16 20 H -0.25 -0.39 6.73 56.52 0.38 -0.01 16 21 H -0.25 -0.44 7.11 56.52 0.40 -0.03 16 22 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 23 C 0.16 0.11 6.66 -39.02 -0.26 -0.15 16 24 O -0.48 0.02 11.84 -18.84 -0.22 -0.20 16 25 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 26 H 0.07 -0.23 8.08 -51.93 -0.42 -0.65 16 27 H 0.07 -0.18 7.52 -51.93 -0.39 -0.57 16 28 H 0.13 -0.44 6.40 -52.49 -0.34 -0.78 16 29 H 0.40 -1.05 6.61 -40.82 -0.27 -1.32 16 30 H 0.09 0.14 7.55 -51.93 -0.39 -0.25 16 31 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 33 H 0.08 -0.07 8.04 -51.93 -0.42 -0.49 16 34 H 0.08 -0.13 8.04 -51.93 -0.42 -0.55 16 35 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 36 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 37 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 38 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 39 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 40 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 41 H 0.08 -0.22 8.06 -51.93 -0.42 -0.64 16 42 H 0.09 -0.31 8.01 -51.93 -0.42 -0.72 16 43 H 0.14 0.37 4.46 -52.49 -0.23 0.13 16 44 H 0.12 -0.12 7.82 -51.93 -0.41 -0.53 16 45 H 0.38 -0.50 8.70 45.56 0.40 -0.11 16 46 H 0.39 -1.78 9.06 45.56 0.41 -1.37 16 LS Contribution 373.79 15.07 5.63 5.63 Total: 0.00 -8.49 373.79 -8.21 -16.70 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -5.87 Total: -12.52 kcal Atomic # 6 Polarization: 5.12 SS G_CDS: -0.50 Total: 4.61 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.27 Total: -0.33 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.59 Total: -4.93 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: -6.60 Total: -9.17 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.49 -8.21 -16.70 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17626288_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.236 kcal (2) G-P(sol) polarization free energy of solvation -8.490 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.208 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.697 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds