Wall clock time and date at job start Sun Mar 7 2021 13:35:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37639 * 125.67806 * 2 1 4 4 C 1.46675 * 126.22213 * 359.97438 * 3 2 1 5 5 O 1.21688 * 119.99931 * 3.95042 * 4 3 2 6 6 N 1.34778 * 119.99855 * 183.95231 * 4 3 2 7 7 C 1.46495 * 120.00141 * 174.62267 * 6 4 3 8 8 C 1.53569 * 109.03936 * 84.80137 * 7 6 4 9 9 C 1.55918 * 109.50664 * 169.46742 * 8 7 6 10 10 Si 1.89655 * 99.33555 * 319.37864 * 9 8 7 11 11 C 1.86302 * 111.45419 * 263.36558 * 10 9 8 12 12 C 1.86297 * 111.51401 * 138.38034 * 10 9 8 13 13 C 1.55149 * 109.12593 * 206.54948 * 7 6 4 14 14 C 1.37883 * 107.55089 * 179.71468 * 3 2 1 15 15 C 1.39875 * 107.09084 * 0.26866 * 14 3 2 16 16 Br 1.89106 * 126.07279 * 180.02562 * 15 14 3 17 17 C 1.35505 * 107.85775 * 359.97438 * 15 14 3 18 18 C 1.50696 * 125.57426 * 179.97438 * 17 15 14 19 19 O 1.42909 * 109.46750 * 122.96852 * 18 17 15 20 20 Si 1.86302 * 109.47262 * 242.96624 * 18 17 15 21 21 H 1.48504 * 109.47114 * 172.48368 * 20 18 17 22 22 H 1.48498 * 109.46995 * 292.48335 * 20 18 17 23 23 H 1.48497 * 109.47054 * 52.48278 * 20 18 17 24 24 H 1.09005 * 109.47050 * 84.47739 * 1 2 3 25 25 H 1.09000 * 109.47031 * 204.47737 * 1 2 3 26 26 H 1.08993 * 109.47181 * 324.47922 * 1 2 3 27 27 H 0.97005 * 119.99653 * 354.62045 * 6 4 3 28 28 H 1.08994 * 109.10672 * 325.70273 * 7 6 4 29 29 H 1.09002 * 109.47533 * 289.48731 * 8 7 6 30 30 H 1.08992 * 109.47593 * 49.43773 * 8 7 6 31 31 H 1.09003 * 111.42442 * 201.84654 * 9 8 7 32 32 H 1.09007 * 111.47292 * 76.92637 * 9 8 7 33 33 H 1.09004 * 109.46976 * 169.79525 * 11 10 9 34 34 H 1.09000 * 109.47451 * 289.79034 * 11 10 9 35 35 H 1.08999 * 109.47397 * 49.79387 * 11 10 9 36 36 H 1.08999 * 109.47024 * 310.17325 * 12 10 9 37 37 H 1.08999 * 109.46995 * 70.17480 * 12 10 9 38 38 H 1.09001 * 109.46641 * 190.17515 * 12 10 9 39 39 H 1.08999 * 111.04652 * 329.05102 * 13 7 6 40 40 H 1.08999 * 111.04773 * 92.97330 * 13 7 6 41 41 H 1.08001 * 126.45641 * 180.28681 * 14 3 2 42 42 H 1.09001 * 109.47378 * 2.97184 * 18 17 15 43 43 H 0.96699 * 113.99563 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6237 2.7639 0.0716 6 7 2.7096 3.5145 -0.0809 7 6 2.2510 4.9007 -0.2003 8 6 1.9623 5.4553 1.2024 9 6 1.7336 6.9952 1.1164 10 14 3.0897 7.4384 -0.1333 11 6 4.6369 8.0279 0.7207 12 6 2.4891 8.6863 -1.3793 13 6 3.3403 5.7361 -0.9232 14 6 3.5782 0.6891 0.0065 15 6 3.5529 -0.7095 0.0042 16 35 5.0610 -1.8504 0.0115 17 6 2.2558 -1.1016 -0.0029 18 6 1.7714 -2.5286 -0.0082 19 8 0.9184 -2.7461 1.1176 20 14 0.8235 -2.8569 -1.5780 21 1 0.5030 -4.3041 -1.6693 22 1 -0.4361 -2.0705 -1.5693 23 1 1.6481 -2.4579 -2.7468 24 1 -0.3633 0.0989 -1.0229 25 1 -0.3633 -0.9353 0.4258 26 1 -0.3633 0.8364 0.5970 27 1 3.6593 3.3179 -0.0597 28 1 1.3340 4.9236 -0.7890 29 1 1.0694 4.9774 1.6055 30 1 2.8099 5.2498 1.8560 31 1 1.9056 7.4777 2.0786 32 1 0.7424 7.2304 0.7284 33 1 5.4473 8.0999 -0.0047 34 1 4.4571 9.0079 1.1628 35 1 4.9117 7.3211 1.5036 36 1 1.5376 8.3553 -1.7955 37 1 2.3561 9.6518 -0.8914 38 1 3.2224 8.7818 -2.1802 39 1 4.3365 5.3485 -0.7101 40 1 3.1579 5.7715 -1.9972 41 1 4.4583 1.3150 0.0126 42 1 2.6261 -3.2027 0.0480 43 1 0.5686 -3.6456 1.1780 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17626288_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:35:51 Heat of formation + Delta-G solvation = -62.817781 kcal Electronic energy + Delta-G solvation = -24144.969934 eV Core-core repulsion = 20588.366644 eV Total energy + Delta-G solvation = -3556.603290 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 374.057 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.73261 -40.36882 -37.88033 -37.16227 -34.52151 -33.59986 -31.97565 -30.88537 -29.58607 -29.25581 -28.56111 -27.28157 -26.89700 -24.63250 -23.10966 -21.69138 -21.20001 -20.25759 -18.79861 -18.64112 -17.36668 -16.96376 -16.80563 -16.06719 -15.91434 -15.51221 -15.24625 -14.86134 -14.56795 -14.44419 -14.28205 -14.25333 -14.02285 -13.99444 -13.84632 -13.72686 -13.50815 -13.34986 -13.20135 -12.97661 -12.85638 -12.80453 -12.50966 -12.34910 -11.99878 -11.81223 -11.74967 -11.21916 -10.99802 -10.95166 -10.71372 -10.66404 -10.44617 -10.04521 -9.68789 -9.15246 0.25107 0.73245 0.86627 1.17801 1.28044 1.39937 1.43362 1.64646 1.77195 1.77541 1.81118 2.32934 2.33207 2.56005 3.05688 3.56434 3.65675 3.82588 3.89989 4.04163 4.11898 4.28236 4.29395 4.34708 4.41036 4.50372 4.51619 4.63422 4.65894 4.67716 4.68533 4.70328 4.77041 4.93987 5.00445 5.23496 5.28606 5.32682 5.37625 5.40115 5.46656 5.56846 5.71953 5.92784 6.34220 6.49372 7.19039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.386 5.386 3 C -0.034 4.034 4 C 0.590 3.410 5 O -0.542 6.542 6 N -0.711 5.711 7 C 0.154 3.846 8 C -0.130 4.130 9 C -0.395 4.395 10 Si 0.977 3.023 11 C -0.442 4.442 12 C -0.444 4.444 13 C -0.412 4.412 14 C -0.111 4.111 15 C -0.160 4.160 16 Br -0.021 7.021 17 C 0.089 3.911 18 C -0.062 4.062 19 O -0.543 6.543 20 Si 0.929 3.071 21 H -0.240 1.240 22 H -0.241 1.241 23 H -0.240 1.240 24 H 0.080 0.920 25 H 0.099 0.901 26 H 0.107 0.893 27 H 0.403 0.597 28 H 0.089 0.911 29 H 0.073 0.927 30 H 0.067 0.933 31 H 0.080 0.920 32 H 0.080 0.920 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.086 0.914 40 H 0.086 0.914 41 H 0.156 0.844 42 H 0.098 0.902 43 H 0.387 0.613 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.311 0.273 -1.119 1.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.058 5.058 3 C -0.149 4.149 4 C 0.377 3.623 5 O -0.420 6.420 6 N -0.362 5.362 7 C 0.050 3.950 8 C -0.169 4.169 9 C -0.482 4.482 10 Si 1.174 2.826 11 C -0.550 4.550 12 C -0.552 4.552 13 C -0.497 4.497 14 C -0.139 4.139 15 C -0.245 4.245 16 Br 0.063 6.937 17 C -0.032 4.032 18 C -0.172 4.172 19 O -0.349 6.349 20 Si 0.747 3.253 21 H -0.162 1.162 22 H -0.163 1.163 23 H -0.162 1.162 24 H 0.098 0.902 25 H 0.118 0.882 26 H 0.126 0.874 27 H 0.238 0.762 28 H 0.107 0.893 29 H 0.091 0.909 30 H 0.086 0.914 31 H 0.099 0.901 32 H 0.099 0.901 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.105 0.895 40 H 0.105 0.895 41 H 0.174 0.826 42 H 0.115 0.885 43 H 0.235 0.765 Dipole moment (debyes) X Y Z Total from point charges 0.290 0.573 -1.761 1.875 hybrid contribution 0.324 -0.573 0.390 0.765 sum 0.614 0.001 -1.371 1.502 Atomic orbital electron populations 1.22615 0.74925 1.06392 1.04511 1.43731 1.07242 1.03879 1.50930 1.20073 0.89736 0.87913 1.17154 1.16894 0.85844 0.83226 0.76319 1.90814 1.16113 1.84707 1.50381 1.45899 1.09632 1.06092 1.74578 1.21491 0.98160 0.79084 0.96229 1.22254 1.02658 0.95551 0.96389 1.26610 1.11705 0.98479 1.11412 0.80375 0.68088 0.66609 0.67508 1.26013 1.14990 1.06221 1.07818 1.26028 1.06261 1.11528 1.11408 1.27008 1.00449 1.16709 1.05507 1.21179 0.95190 0.92894 1.04593 1.20689 0.90891 0.94368 1.18582 1.96656 1.35781 1.63009 1.98222 1.19488 0.89036 0.87825 1.06817 1.24365 0.99572 0.92716 1.00573 1.86482 1.66161 1.36141 1.46153 0.86042 0.80757 0.82203 0.76260 1.16240 1.16328 1.16246 0.90186 0.88201 0.87440 0.76174 0.89286 0.90874 0.91432 0.90074 0.90133 0.91037 0.90981 0.90993 0.90940 0.90976 0.91108 0.89528 0.89516 0.82601 0.88454 0.76461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.09 8.57 59.85 0.51 0.60 16 2 N -0.39 -1.11 3.12 -115.59 -0.36 -1.47 16 3 C -0.03 -0.09 6.89 -81.98 -0.56 -0.66 16 4 C 0.59 1.82 7.73 -12.85 -0.10 1.72 16 5 O -0.54 -3.14 14.47 5.20 0.08 -3.06 16 6 N -0.71 -0.18 5.04 -53.73 -0.27 -0.45 16 7 C 0.15 -0.02 2.60 -66.50 -0.17 -0.20 16 8 C -0.13 -0.01 5.50 -24.88 -0.14 -0.15 16 9 C -0.40 0.54 5.95 38.72 0.23 0.77 16 10 Si 0.98 -3.30 13.36 -169.99 -2.27 -5.57 16 11 C -0.44 1.10 8.65 101.05 0.87 1.98 16 12 C -0.44 0.96 8.65 101.05 0.87 1.84 16 13 C -0.41 1.03 5.46 38.29 0.21 1.23 16 14 C -0.11 -0.17 10.34 -39.10 -0.40 -0.57 16 15 C -0.16 -0.38 6.53 -39.94 -0.26 -0.64 16 16 Br -0.02 -0.03 33.05 -68.01 -2.25 -2.28 16 17 C 0.09 0.21 5.17 -81.90 -0.42 -0.21 16 18 C -0.06 0.00 2.78 36.00 0.10 0.10 16 19 O -0.54 0.33 11.42 -35.23 -0.40 -0.07 16 20 Si 0.93 -0.55 26.51 -169.99 -4.51 -5.05 16 21 H -0.24 0.28 7.11 56.52 0.40 0.68 16 22 H -0.24 0.05 6.12 56.52 0.35 0.40 16 23 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 24 H 0.08 0.08 7.76 -51.93 -0.40 -0.33 16 25 H 0.10 0.04 5.74 -51.93 -0.30 -0.26 16 26 H 0.11 0.28 6.56 -51.93 -0.34 -0.06 16 27 H 0.40 -0.86 7.30 -40.82 -0.30 -1.16 16 28 H 0.09 0.13 7.62 -51.93 -0.40 -0.27 16 29 H 0.07 0.18 8.14 -51.93 -0.42 -0.25 16 30 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 31 H 0.08 -0.12 8.06 -51.93 -0.42 -0.54 16 32 H 0.08 -0.08 8.06 -51.92 -0.42 -0.50 16 33 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 39 H 0.09 -0.30 7.73 -51.93 -0.40 -0.70 16 40 H 0.09 -0.21 8.04 -51.93 -0.42 -0.63 16 41 H 0.16 -0.20 7.45 -52.49 -0.39 -0.59 16 42 H 0.10 -0.10 6.95 -51.93 -0.36 -0.47 16 43 H 0.39 -2.03 8.74 45.56 0.40 -1.64 16 LS Contribution 366.17 15.07 5.52 5.52 Total: 0.00 -6.97 366.17 -9.65 -16.62 By element: Atomic # 1 Polarization: -4.09 SS G_CDS: -5.92 Total: -10.01 kcal Atomic # 6 Polarization: 5.09 SS G_CDS: 0.74 Total: 5.83 kcal Atomic # 7 Polarization: -1.29 SS G_CDS: -0.63 Total: -1.92 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.33 Total: -3.13 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: -6.78 Total: -10.62 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.28 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -6.97 -9.65 -16.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17626288_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.196 kcal (2) G-P(sol) polarization free energy of solvation -6.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.621 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds