Wall clock time and date at job start Sun Mar 7 2021 14:14:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86298 * 109.47476 * 2 1 4 4 C 1.86299 * 109.47063 * 239.99890 * 2 1 3 5 5 C 1.86307 * 109.47024 * 120.00133 * 2 1 3 6 6 N 1.46495 * 109.47231 * 54.98755 * 5 2 1 7 7 C 1.46500 * 120.00196 * 275.16041 * 6 5 2 8 8 C 1.50698 * 109.47146 * 270.00185 * 7 6 5 9 9 C 1.38236 * 119.99667 * 269.72344 * 8 7 6 10 10 C 1.38231 * 119.99589 * 179.76831 * 9 8 7 11 11 C 1.38239 * 120.00114 * 0.50515 * 10 9 8 12 12 C 1.38234 * 119.99767 * 359.75257 * 11 10 9 13 13 C 1.38228 * 120.00121 * 90.00117 * 8 7 6 14 14 C 1.34780 * 119.99832 * 95.16297 * 6 5 2 15 15 O 1.21290 * 119.99768 * 185.30844 * 14 6 5 16 16 C 1.50697 * 120.00256 * 5.30008 * 14 6 5 17 17 C 1.50699 * 109.47429 * 174.99019 * 16 14 6 18 18 C 1.34841 * 125.89257 * 274.69755 * 17 16 14 19 19 C 1.40892 * 107.42017 * 180.26020 * 18 17 16 20 20 C 1.34849 * 107.41321 * 359.97438 * 19 18 17 21 21 C 1.50698 * 125.88933 * 179.97438 * 20 19 18 22 22 O 1.42899 * 109.47734 * 120.03941 * 21 20 19 23 23 Si 1.86303 * 109.47082 * 0.03586 * 21 20 19 24 24 H 1.48502 * 109.47313 * 300.00011 * 23 21 20 25 25 H 1.48494 * 109.47063 * 60.00240 * 23 21 20 26 26 H 1.48500 * 109.47052 * 180.02562 * 23 21 20 27 27 N 1.36342 * 108.22161 * 0.02562 * 20 19 18 28 28 H 1.08998 * 109.46753 * 300.00185 * 1 2 3 29 29 H 1.09006 * 109.46870 * 59.99806 * 1 2 3 30 30 H 1.08999 * 109.47299 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.47502 * 179.97438 * 3 2 1 32 32 H 1.09005 * 109.46853 * 300.00361 * 3 2 1 33 33 H 1.09000 * 109.46845 * 59.99859 * 3 2 1 34 34 H 1.09002 * 109.46956 * 304.94472 * 4 2 1 35 35 H 1.09000 * 109.47174 * 64.94370 * 4 2 1 36 36 H 1.09003 * 109.47169 * 184.94837 * 4 2 1 37 37 H 1.08998 * 109.46610 * 294.99001 * 5 2 1 38 38 H 1.08996 * 109.47099 * 174.99182 * 5 2 1 39 39 H 1.09001 * 109.46870 * 30.00225 * 7 6 5 40 40 H 1.09003 * 109.46928 * 149.99537 * 7 6 5 41 41 H 1.07997 * 120.00215 * 0.02562 * 9 8 7 42 42 H 1.08005 * 120.00215 * 180.23558 * 10 9 8 43 43 H 1.07999 * 119.99838 * 179.72619 * 11 10 9 44 44 H 1.07996 * 119.99423 * 179.97438 * 12 11 10 45 45 H 1.08002 * 120.00093 * 359.97438 * 13 8 7 46 46 H 1.09000 * 109.46775 * 54.98761 * 16 14 6 47 47 H 1.09007 * 109.46764 * 294.99130 * 16 14 6 48 48 H 1.08004 * 126.29183 * 0.23257 * 18 17 16 49 49 H 1.08001 * 126.29395 * 180.02562 * 19 18 17 50 50 H 1.09005 * 109.47004 * 240.04437 * 21 20 19 51 51 H 0.96693 * 114.00462 * 180.02562 * 22 21 20 52 52 H 0.97005 * 125.63442 * 179.97438 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4840 -0.8783 1.5212 6 7 1.8996 -2.2202 1.5830 7 6 0.5753 -2.4158 2.1781 8 6 0.7223 -2.6860 3.6533 9 6 0.8575 -3.9844 4.1080 10 6 0.9972 -4.2319 5.4608 11 6 0.9912 -3.1818 6.3598 12 6 0.8507 -1.8839 5.9055 13 6 0.7163 -1.6360 4.5523 14 6 2.5804 -3.2750 1.0925 15 8 2.0589 -4.3694 1.0556 16 6 3.9896 -3.0945 0.5898 17 6 4.5644 -4.4358 0.2135 18 6 5.1667 -5.3015 1.0537 19 6 5.5589 -6.4220 0.2949 20 6 5.1808 -6.1984 -0.9800 21 6 5.3971 -7.1327 -2.1424 22 8 4.1341 -7.4943 -2.7046 23 14 6.2757 -8.6657 -1.5518 24 1 7.5884 -8.2901 -0.9677 25 1 5.4502 -9.3427 -0.5196 26 1 6.4894 -9.5862 -2.6974 27 7 4.5700 -4.9807 -1.0362 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.5740 1.7564 0.0005 32 1 2.1207 2.2702 -0.8900 33 1 2.1207 2.2702 0.8900 34 1 2.0501 -1.8772 -1.5665 35 1 2.1947 -0.3159 -2.4089 36 1 3.5704 -0.9557 -1.4779 37 1 2.1957 -0.3152 2.4088 38 1 3.5702 -0.9567 1.4775 39 1 -0.0252 -1.5180 2.0312 40 1 0.0840 -3.2636 1.7005 41 1 0.8581 -4.8051 3.4060 42 1 1.1066 -5.2461 5.8158 43 1 1.0959 -3.3756 7.4171 44 1 0.8456 -1.0636 6.6079 45 1 0.6066 -0.6219 4.1974 46 1 4.5998 -2.6443 1.3728 47 1 3.9827 -2.4438 -0.2848 48 1 5.3206 -5.1616 2.1135 49 1 6.0680 -7.2991 0.6663 50 1 6.0032 -6.6358 -2.9000 51 1 4.1970 -8.0960 -3.4589 52 1 4.2007 -4.5700 -1.8337 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17626732_14644196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:14:37 Heat of formation + Delta-G solvation = -36.414887 kcal Electronic energy + Delta-G solvation = -30763.494854 eV Core-core repulsion = 26852.100823 eV Total energy + Delta-G solvation = -3911.394031 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 360.178 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.19026 -40.92304 -39.65684 -37.64945 -36.52996 -33.63189 -32.31679 -31.75045 -31.72453 -29.83532 -29.64766 -28.67901 -28.53526 -27.83812 -26.51654 -24.74655 -23.37119 -22.43052 -21.21909 -21.13157 -20.07601 -18.47729 -18.16692 -17.94000 -17.73137 -16.96125 -16.65480 -16.12162 -15.82747 -15.78339 -15.10196 -15.05027 -14.72971 -14.46538 -14.42909 -14.37734 -14.30452 -14.21667 -14.11961 -14.02911 -13.92499 -13.63621 -13.52468 -13.47367 -13.33802 -13.26110 -13.18111 -13.12016 -12.85436 -12.65971 -12.40108 -12.22516 -11.92142 -11.82737 -11.79991 -11.68636 -11.08142 -11.01826 -10.73922 -10.42604 -9.74751 -9.65679 -9.60174 -9.21002 -8.75883 0.41240 0.57900 1.11485 1.30684 1.35379 1.51536 1.61360 1.61949 1.64538 1.82010 2.01407 2.05576 2.31642 2.42306 2.56911 3.02375 3.45521 3.63734 3.82530 3.89665 4.00907 4.01879 4.03206 4.10927 4.18220 4.28534 4.33352 4.37897 4.42172 4.51014 4.55787 4.57827 4.59086 4.59690 4.62599 4.63887 4.67799 4.72888 4.78615 4.82778 4.93266 5.14012 5.22008 5.29891 5.36155 5.40671 5.41467 5.46539 5.47755 5.61654 5.70441 5.75057 6.16351 6.17049 6.30598 6.38506 6.56312 6.78259 7.29963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 0.996 3.004 3 C -0.449 4.449 4 C -0.453 4.453 5 C -0.190 4.190 6 N -0.591 5.591 7 C 0.148 3.852 8 C -0.109 4.109 9 C -0.096 4.096 10 C -0.122 4.122 11 C -0.116 4.116 12 C -0.125 4.125 13 C -0.108 4.108 14 C 0.512 3.488 15 O -0.519 6.519 16 C -0.079 4.079 17 C 0.039 3.961 18 C -0.174 4.174 19 C -0.193 4.193 20 C 0.035 3.965 21 C -0.062 4.062 22 O -0.549 6.549 23 Si 0.972 3.028 24 H -0.248 1.248 25 H -0.246 1.246 26 H -0.258 1.258 27 N -0.532 5.532 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.068 0.932 35 H 0.074 0.926 36 H 0.069 0.931 37 H 0.088 0.912 38 H 0.090 0.910 39 H 0.091 0.909 40 H 0.095 0.905 41 H 0.127 0.873 42 H 0.122 0.878 43 H 0.121 0.879 44 H 0.121 0.879 45 H 0.120 0.880 46 H 0.115 0.885 47 H 0.104 0.896 48 H 0.135 0.865 49 H 0.136 0.864 50 H 0.072 0.928 51 H 0.381 0.619 52 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.750 4.949 -1.679 5.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.191 2.809 3 C -0.557 4.557 4 C -0.561 4.561 5 C -0.359 4.359 6 N -0.324 5.324 7 C 0.026 3.974 8 C -0.110 4.110 9 C -0.114 4.114 10 C -0.140 4.140 11 C -0.135 4.135 12 C -0.143 4.143 13 C -0.127 4.127 14 C 0.300 3.700 15 O -0.394 6.394 16 C -0.119 4.119 17 C -0.075 4.075 18 C -0.198 4.198 19 C -0.218 4.218 20 C -0.079 4.079 21 C -0.171 4.171 22 O -0.355 6.355 23 Si 0.793 3.207 24 H -0.172 1.172 25 H -0.168 1.168 26 H -0.183 1.183 27 N -0.127 5.127 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.093 0.907 36 H 0.088 0.912 37 H 0.106 0.894 38 H 0.108 0.892 39 H 0.109 0.891 40 H 0.113 0.887 41 H 0.145 0.855 42 H 0.140 0.860 43 H 0.139 0.861 44 H 0.139 0.861 45 H 0.138 0.862 46 H 0.133 0.867 47 H 0.122 0.878 48 H 0.153 0.847 49 H 0.153 0.847 50 H 0.090 0.910 51 H 0.228 0.772 52 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 1.630 4.050 -1.055 4.491 hybrid contribution -0.192 0.406 -0.740 0.866 sum 1.438 4.456 -1.795 5.015 Atomic orbital electron populations 1.26181 1.20222 1.04692 1.04682 0.79660 0.68145 0.66690 0.66371 1.26096 1.06429 1.18406 1.04813 1.26235 1.05909 1.08272 1.15668 1.26791 1.03808 0.89226 1.16086 1.47575 1.18292 1.06831 1.59740 1.20488 0.84165 1.03669 0.89077 1.20196 1.01521 0.93598 0.95661 1.21237 0.97768 0.96669 0.95776 1.21223 1.00105 0.99282 0.93404 1.21220 0.99543 0.92939 0.99749 1.21145 1.00567 0.96939 0.95638 1.21034 1.00027 0.98406 0.93193 1.20503 0.87561 0.83971 0.78001 1.90754 1.69203 1.24612 1.54852 1.20314 0.93848 0.94280 1.03463 1.19454 1.06374 0.96728 0.84904 1.20519 1.05706 0.94753 0.98840 1.20568 1.08592 1.00772 0.91835 1.19535 1.05243 0.87748 0.95328 1.24453 0.91448 1.05315 0.95921 1.86535 1.27903 1.69475 1.51542 0.85358 0.79223 0.75317 0.80843 1.17155 1.16844 1.18253 1.41713 1.46204 1.15540 1.09210 0.91066 0.90983 0.90959 0.90998 0.90915 0.90997 0.91243 0.90686 0.91151 0.89395 0.89172 0.89052 0.88655 0.85498 0.86033 0.86111 0.86063 0.86226 0.86743 0.87834 0.84679 0.84660 0.91038 0.77179 0.75099 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.22 7.47 101.05 0.76 1.97 16 2 Si 1.00 -4.23 12.30 -169.99 -2.09 -6.32 16 3 C -0.45 1.59 8.65 101.05 0.87 2.46 16 4 C -0.45 1.31 7.57 101.05 0.76 2.08 16 5 C -0.19 0.63 4.62 59.84 0.28 0.91 16 6 N -0.59 0.26 1.96 -113.09 -0.22 0.04 16 7 C 0.15 0.04 5.00 -5.19 -0.03 0.01 16 8 C -0.11 -0.17 5.46 -104.63 -0.57 -0.74 16 9 C -0.10 -0.29 9.70 -39.58 -0.38 -0.67 16 10 C -0.12 -0.28 10.05 -39.58 -0.40 -0.68 16 11 C -0.12 -0.18 10.05 -39.58 -0.40 -0.57 16 12 C -0.12 -0.12 10.05 -39.59 -0.40 -0.51 16 13 C -0.11 -0.07 9.70 -39.59 -0.38 -0.45 16 14 C 0.51 1.02 7.52 -10.99 -0.08 0.94 16 15 O -0.52 -3.21 15.41 5.55 0.09 -3.13 16 16 C -0.08 0.01 4.72 -29.04 -0.14 -0.13 16 17 C 0.04 0.11 5.66 -81.79 -0.46 -0.36 16 18 C -0.17 -0.68 10.76 -39.78 -0.43 -1.11 16 19 C -0.19 -0.77 9.37 -39.78 -0.37 -1.15 16 20 C 0.03 0.12 6.54 -81.79 -0.53 -0.42 16 21 C -0.06 -0.05 3.07 36.00 0.11 0.06 16 22 O -0.55 -0.76 12.86 -35.23 -0.45 -1.22 16 23 Si 0.97 0.35 25.87 -169.99 -4.40 -4.04 16 24 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 25 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 26 H -0.26 0.00 7.11 56.52 0.40 0.40 16 27 N -0.53 -1.39 6.08 -5.44 -0.03 -1.42 16 28 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 29 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 30 H 0.07 -0.13 7.09 -51.93 -0.37 -0.50 16 31 H 0.07 -0.27 7.96 -51.93 -0.41 -0.68 16 32 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 33 H 0.07 -0.26 7.96 -51.93 -0.41 -0.67 16 34 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 36 H 0.07 -0.26 6.81 -51.93 -0.35 -0.61 16 37 H 0.09 -0.35 7.93 -51.93 -0.41 -0.76 16 38 H 0.09 -0.41 5.97 -51.93 -0.31 -0.72 16 39 H 0.09 -0.18 6.04 -51.93 -0.31 -0.49 16 40 H 0.10 0.17 7.30 -51.93 -0.38 -0.21 16 41 H 0.13 0.51 7.87 -52.49 -0.41 0.09 16 42 H 0.12 0.13 8.06 -52.48 -0.42 -0.29 16 43 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 44 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 45 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 46 H 0.11 -0.22 7.36 -51.93 -0.38 -0.60 16 47 H 0.10 -0.26 5.55 -51.93 -0.29 -0.54 16 48 H 0.14 0.38 8.06 -52.48 -0.42 -0.05 16 49 H 0.14 0.36 6.22 -52.49 -0.33 0.04 16 50 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 51 H 0.38 -1.26 8.74 45.56 0.40 -0.86 16 52 H 0.41 0.27 8.96 -40.82 -0.37 -0.09 16 LS Contribution 421.56 15.07 6.35 6.35 Total: 0.00 -9.45 421.56 -10.28 -19.73 By element: Atomic # 1 Polarization: -3.91 SS G_CDS: -7.73 Total: -11.64 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -1.80 Total: 1.64 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.25 Total: -1.38 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.37 Total: -4.34 kcal Atomic # 14 Polarization: -3.87 SS G_CDS: -6.49 Total: -10.36 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -9.45 -10.28 -19.73 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17626732_14644196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.683 kcal (2) G-P(sol) polarization free energy of solvation -9.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.415 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds