Wall clock time and date at job start Sun Mar 7 2021 08:30:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37862 * 126.45775 * 2 1 4 4 C 1.46684 * 126.23414 * 0.02562 * 3 2 1 5 5 O 1.21694 * 119.99941 * 359.71545 * 4 3 2 6 6 N 1.34777 * 119.99756 * 179.71232 * 4 3 2 7 7 C 1.46507 * 119.99758 * 179.97438 * 6 4 3 8 8 C 1.50694 * 112.84833 * 309.67304 * 7 6 4 9 9 C 1.38440 * 120.01195 * 168.80586 * 8 7 6 10 10 F 1.35102 * 120.02757 * 0.24616 * 9 8 7 11 11 C 1.38485 * 119.94872 * 179.97438 * 9 8 7 12 12 C 1.38168 * 119.97332 * 359.97438 * 11 9 8 13 13 C 1.38265 * 120.02977 * 0.02562 * 12 11 9 14 14 C 1.38220 * 120.01674 * 348.79883 * 8 7 6 15 15 C 1.53774 * 113.61512 * 178.47164 * 7 6 4 16 16 C 1.53779 * 87.08244 * 270.80475 * 15 7 6 17 17 H 1.08999 * 113.61659 * 89.11394 * 16 15 7 18 18 F 1.39905 * 113.61466 * 219.93618 * 16 15 7 19 19 C 1.53782 * 87.08170 * 334.56569 * 16 15 7 20 20 N 1.37655 * 107.53654 * 179.74301 * 3 2 1 21 21 C 1.35541 * 108.63770 * 0.26573 * 20 3 2 22 22 C 1.50701 * 125.56175 * 179.97438 * 21 20 3 23 23 O 1.42897 * 109.47165 * 299.99739 * 22 21 20 24 24 Si 1.86293 * 109.47149 * 179.97438 * 22 21 20 25 25 C 1.35452 * 108.87479 * 359.97438 * 21 20 3 26 26 H 1.08992 * 109.47846 * 89.99500 * 1 2 3 27 27 H 1.09005 * 109.47039 * 210.00122 * 1 2 3 28 28 H 1.09004 * 109.46884 * 329.99048 * 1 2 3 29 29 H 0.96997 * 120.00400 * 0.02562 * 6 4 3 30 30 H 1.08007 * 120.01077 * 179.97438 * 11 9 8 31 31 H 1.08002 * 119.98600 * 180.02562 * 12 11 9 32 32 H 1.08001 * 119.97899 * 179.97438 * 13 12 11 33 33 H 1.08000 * 119.98716 * 0.02562 * 14 8 7 34 34 H 1.09006 * 113.61155 * 25.34855 * 15 7 6 35 35 H 1.09002 * 113.61581 * 156.25234 * 15 7 6 36 36 H 1.08995 * 113.61656 * 270.89127 * 19 16 15 37 37 H 1.08996 * 113.61426 * 139.97750 * 19 16 15 38 38 H 0.96994 * 125.68229 * 180.28575 * 20 3 2 39 39 H 1.09000 * 109.47124 * 59.99625 * 22 21 20 40 40 H 0.96706 * 114.00240 * 300.00538 * 23 22 21 41 41 H 1.48502 * 110.00027 * 58.68310 * 24 22 21 42 42 H 1.48504 * 110.00201 * 179.97438 * 24 22 21 43 43 H 1.07996 * 126.06906 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1088 0.0000 4 6 1.8898 2.5092 0.0005 5 8 0.7026 2.7766 -0.0042 6 7 2.8037 3.4998 0.0063 7 6 2.3679 4.8985 0.0063 8 6 1.3525 5.1950 -1.0670 9 6 0.6684 6.3985 -1.0596 10 9 0.9142 7.3100 -0.0932 11 6 -0.2641 6.6698 -2.0469 12 6 -0.5102 5.7395 -3.0383 13 6 0.1735 4.5378 -3.0447 14 6 1.1038 4.2655 -2.0593 15 6 3.5291 5.9056 0.0509 16 6 3.4377 5.8236 1.5837 17 1 4.0544 5.0359 2.0164 18 9 3.6054 7.0573 2.2220 19 6 1.9656 5.4204 1.3959 20 7 3.6284 0.6625 0.0059 21 6 3.6217 -0.6929 0.0035 22 6 4.8433 -1.5754 0.0077 23 8 5.6293 -1.3064 -1.1550 24 14 4.3182 -3.3628 0.0029 25 6 2.3379 -1.1248 -0.0032 26 1 -0.3634 0.0001 -1.0275 27 1 -0.3633 -0.8900 0.5139 28 1 -0.3633 0.8899 0.5140 29 1 3.7500 3.2867 0.0098 30 1 -0.7986 7.6083 -2.0419 31 1 -1.2371 5.9510 -3.8086 32 1 -0.0198 3.8109 -3.8198 33 1 1.6371 3.3263 -2.0651 34 1 4.4628 5.5135 -0.3524 35 1 3.2723 6.8862 -0.3501 36 1 1.2815 6.2682 1.3625 37 1 1.6372 4.6365 2.0783 38 1 4.4190 1.2243 0.0112 39 1 5.4346 -1.3732 0.9008 40 1 5.1655 -1.4649 -1.9886 41 1 3.4843 -3.6440 -1.1933 42 1 5.5138 -4.2435 0.0064 43 1 2.0136 -2.1549 -0.0069 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17636826_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:30:09 Heat of formation + Delta-G solvation = -43.994654 kcal Electronic energy + Delta-G solvation = -31711.226361 eV Core-core repulsion = 27168.113896 eV Total energy + Delta-G solvation = -4543.112466 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.06553 -48.53337 -42.77782 -41.63196 -39.41122 -38.77884 -37.95570 -34.66274 -33.41733 -32.31216 -31.54167 -31.36163 -28.23091 -27.32292 -27.22371 -25.87203 -23.77877 -23.23700 -22.56215 -21.73429 -20.76604 -20.59308 -19.64969 -18.70440 -18.30023 -17.94611 -17.20309 -17.11995 -16.90376 -16.80243 -16.70930 -16.48721 -16.11327 -15.85352 -15.72584 -15.48186 -15.08551 -15.02912 -14.78273 -14.40481 -14.29242 -13.98760 -13.94170 -13.76180 -13.65699 -13.56460 -13.50070 -12.99178 -12.94400 -12.84007 -12.71845 -12.30990 -12.16238 -11.94061 -11.61390 -11.47593 -11.17703 -10.92362 -10.46287 -9.90751 -9.82069 -9.58365 -9.25503 -5.03464 0.15033 0.22443 0.31308 1.04384 1.46514 1.54164 1.68905 1.77802 2.06593 2.21547 2.55718 3.00701 3.10644 3.11815 3.25335 3.27229 3.41554 3.44456 3.62468 3.65497 3.82818 3.92611 4.06672 4.09329 4.14568 4.29637 4.32066 4.36901 4.41787 4.49956 4.52175 4.67254 4.75734 4.78667 4.82054 4.93632 4.96516 5.05164 5.09139 5.15218 5.29672 5.34624 5.41989 5.47733 5.55644 5.81674 5.90561 6.10400 6.15738 6.28282 7.00255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.059 4.059 3 C -0.059 4.059 4 C 0.589 3.411 5 O -0.499 6.499 6 N -0.716 5.716 7 C 0.202 3.798 8 C -0.103 4.103 9 C 0.105 3.895 10 F -0.131 7.131 11 C -0.152 4.152 12 C -0.088 4.088 13 C -0.128 4.128 14 C -0.056 4.056 15 C -0.154 4.154 16 C 0.071 3.929 17 H 0.108 0.892 18 F -0.199 7.199 19 C -0.176 4.176 20 N -0.525 5.525 21 C 0.031 3.969 22 C -0.062 4.062 23 O -0.534 6.534 24 Si 0.717 3.283 25 C -0.200 4.200 26 H 0.069 0.931 27 H 0.066 0.934 28 H 0.082 0.918 29 H 0.399 0.601 30 H 0.138 0.862 31 H 0.134 0.866 32 H 0.129 0.871 33 H 0.122 0.878 34 H 0.090 0.910 35 H 0.114 0.886 36 H 0.127 0.873 37 H 0.087 0.913 38 H 0.416 0.584 39 H 0.121 0.879 40 H 0.380 0.620 41 H -0.254 1.254 42 H -0.255 1.255 43 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.469 -3.424 -1.157 3.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.068 4.068 3 C -0.172 4.172 4 C 0.378 3.622 5 O -0.373 6.373 6 N -0.369 5.369 7 C 0.114 3.886 8 C -0.105 4.105 9 C 0.086 3.914 10 F -0.110 7.110 11 C -0.171 4.171 12 C -0.106 4.106 13 C -0.146 4.146 14 C -0.075 4.075 15 C -0.192 4.192 16 C 0.035 3.965 17 H 0.126 0.874 18 F -0.180 7.180 19 C -0.215 4.215 20 N -0.122 5.122 21 C -0.087 4.087 22 C -0.171 4.171 23 O -0.340 6.340 24 Si 0.615 3.385 25 C -0.224 4.224 26 H 0.087 0.913 27 H 0.085 0.915 28 H 0.101 0.899 29 H 0.234 0.766 30 H 0.156 0.844 31 H 0.152 0.848 32 H 0.147 0.853 33 H 0.140 0.860 34 H 0.108 0.892 35 H 0.133 0.867 36 H 0.145 0.855 37 H 0.105 0.895 38 H 0.254 0.746 39 H 0.138 0.862 40 H 0.228 0.772 41 H -0.178 1.178 42 H -0.180 1.180 43 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.198 -3.635 -1.081 3.977 hybrid contribution 1.209 0.881 -0.832 1.712 sum 2.407 -2.755 -1.913 4.128 Atomic orbital electron populations 1.20408 0.88756 1.03410 1.02549 1.19940 0.96049 0.90240 1.00523 1.20163 0.83619 0.93194 1.20213 1.17006 0.85983 0.82783 0.76456 1.90921 1.15533 1.82747 1.48105 1.45606 1.09460 1.04527 1.77302 1.19511 0.94076 0.80980 0.93990 1.19383 0.99554 0.94019 0.97527 1.17337 0.98386 0.87173 0.88539 1.91385 1.93286 1.65661 1.60657 1.21124 0.99091 1.01708 0.95176 1.21058 0.98770 0.93082 0.97663 1.21193 0.96864 0.97426 0.99114 1.20771 0.96767 0.97513 0.92413 1.24026 0.98201 1.00777 0.96212 1.23009 0.98414 0.83297 0.91817 0.87393 1.92841 1.96511 1.45074 1.83542 1.24476 0.97375 1.03916 0.95690 1.41859 1.07087 1.06610 1.56662 1.21060 0.96845 0.83240 1.07586 1.24916 0.91646 1.09141 0.91396 1.86599 1.41976 1.89506 1.15968 0.94237 0.82240 0.72415 0.89587 1.20622 0.90798 0.99187 1.11806 0.91257 0.91470 0.89941 0.76649 0.84436 0.84843 0.85342 0.86022 0.89175 0.86740 0.85500 0.89472 0.74642 0.86151 0.77158 1.17847 1.17968 0.83135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.07 9.83 36.01 0.35 0.29 16 2 C -0.06 -0.05 6.21 -104.16 -0.65 -0.70 16 3 C -0.06 -0.02 7.06 -81.98 -0.58 -0.60 16 4 C 0.59 0.60 5.77 -12.85 -0.07 0.52 16 5 O -0.50 -2.00 12.28 5.19 0.06 -1.94 16 6 N -0.72 0.96 4.79 -49.21 -0.24 0.73 16 7 C 0.20 0.03 1.03 -132.16 -0.14 -0.10 16 8 C -0.10 -0.19 4.52 -104.56 -0.47 -0.67 16 9 C 0.11 0.25 6.73 -39.42 -0.27 -0.02 16 10 F -0.13 -0.37 12.95 2.25 0.03 -0.34 16 11 C -0.15 -0.19 10.03 -39.52 -0.40 -0.59 16 12 C -0.09 -0.04 10.04 -39.60 -0.40 -0.44 16 13 C -0.13 -0.12 10.04 -39.58 -0.40 -0.52 16 14 C -0.06 -0.10 7.51 -39.59 -0.30 -0.40 16 15 C -0.15 0.15 6.95 -25.92 -0.18 -0.03 16 16 C 0.07 -0.01 5.58 -25.92 -0.14 -0.15 16 17 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 18 F -0.20 -0.60 17.41 2.25 0.04 -0.56 16 19 C -0.18 -0.20 6.97 -25.92 -0.18 -0.38 16 20 N -0.53 0.99 5.99 -5.69 -0.03 0.96 16 21 C 0.03 -0.05 6.47 -81.95 -0.53 -0.58 16 22 C -0.06 0.15 3.08 36.01 0.11 0.26 16 23 O -0.53 0.62 12.88 -35.23 -0.45 0.17 16 24 Si 0.72 -1.91 30.54 -169.99 -5.19 -7.10 16 25 C -0.20 0.13 9.27 -39.98 -0.37 -0.24 16 26 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 27 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 28 H 0.08 0.20 6.49 -51.93 -0.34 -0.14 16 29 H 0.40 -1.66 7.76 -40.82 -0.32 -1.98 16 30 H 0.14 -0.05 8.06 -52.48 -0.42 -0.47 16 31 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 32 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 33 H 0.12 0.18 5.78 -52.49 -0.30 -0.12 16 34 H 0.09 -0.28 8.11 -51.93 -0.42 -0.70 16 35 H 0.11 0.01 7.06 -51.93 -0.37 -0.36 16 36 H 0.13 0.31 5.09 -51.93 -0.26 0.04 16 37 H 0.09 0.14 8.14 -51.93 -0.42 -0.28 16 38 H 0.42 -1.74 8.19 -40.82 -0.33 -2.07 16 39 H 0.12 -0.40 7.96 -51.93 -0.41 -0.81 16 40 H 0.38 -1.34 8.70 45.56 0.40 -0.94 16 41 H -0.25 0.12 7.11 56.52 0.40 0.53 16 42 H -0.25 -0.15 7.11 56.52 0.40 0.26 16 43 H 0.15 -0.36 6.17 -52.49 -0.32 -0.68 16 LS Contribution 356.19 15.07 5.37 5.37 Total: 0.00 -7.64 356.19 -9.86 -17.50 By element: Atomic # 1 Polarization: -5.60 SS G_CDS: -4.84 Total: -10.44 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -4.60 Total: -4.34 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.27 Total: 1.68 kcal Atomic # 8 Polarization: -1.38 SS G_CDS: -0.39 Total: -1.77 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 0.07 Total: -0.90 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: -5.19 Total: -7.10 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -7.64 -9.86 -17.50 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.492 kcal (2) G-P(sol) polarization free energy of solvation -7.641 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.134 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds