Wall clock time and date at job start Sun Mar 7 2021 08:30:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.46878 * 2 1 4 4 C 1.50703 * 109.47384 * 240.00318 * 2 1 3 5 5 C 1.38245 * 119.97252 * 120.02197 * 4 2 1 6 6 C 1.38286 * 120.10801 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.06022 * 359.76599 * 6 5 4 8 8 C 1.38761 * 119.93872 * 0.50754 * 7 6 5 9 9 O 1.35898 * 120.05291 * 179.74654 * 8 7 6 10 10 C 1.42902 * 117.00159 * 359.72556 * 9 8 7 11 11 C 1.52992 * 109.47288 * 180.02562 * 10 9 8 12 12 C 1.50700 * 109.47257 * 179.97438 * 11 10 9 13 13 O 1.21279 * 120.00113 * 0.02562 * 12 11 10 14 14 N 1.34784 * 119.99961 * 180.02562 * 12 11 10 15 15 C 1.46494 * 119.99635 * 180.02562 * 14 12 11 16 16 C 1.50700 * 112.85308 * 48.80659 * 15 14 12 17 17 C 1.38439 * 120.01124 * 189.39204 * 16 15 14 18 18 F 1.35097 * 120.02910 * 359.97438 * 17 16 15 19 19 C 1.38485 * 119.94616 * 179.72344 * 17 16 15 20 20 C 1.38181 * 119.96943 * 0.57222 * 19 17 16 21 21 C 1.38267 * 120.03040 * 359.70043 * 20 19 17 22 22 C 1.38216 * 120.01370 * 9.66301 * 16 15 14 23 23 C 1.53783 * 113.61633 * 277.49713 * 15 14 12 24 24 C 1.53784 * 87.08129 * 270.88816 * 23 15 14 25 25 H 1.08999 * 113.69299 * 89.12619 * 24 23 15 26 26 F 1.39901 * 113.61175 * 220.01881 * 24 23 15 27 27 C 1.53777 * 87.07960 * 334.56502 * 24 23 15 28 28 C 1.38160 * 119.97039 * 299.99464 * 4 2 1 29 29 H 0.96700 * 114.00671 * 300.00210 * 1 2 3 30 30 H 1.08993 * 109.47111 * 119.99543 * 2 1 3 31 31 H 1.48500 * 110.00379 * 300.00214 * 3 2 1 32 32 H 1.48509 * 109.99930 * 61.31661 * 3 2 1 33 33 H 1.07996 * 119.94316 * 359.97327 * 5 4 2 34 34 H 1.08001 * 119.96811 * 180.02562 * 6 5 4 35 35 H 1.07994 * 120.03359 * 180.28169 * 7 6 5 36 36 H 1.09004 * 109.47001 * 59.99809 * 10 9 8 37 37 H 1.09005 * 109.47138 * 300.00205 * 10 9 8 38 38 H 1.09004 * 109.47330 * 59.99919 * 11 10 9 39 39 H 1.08997 * 109.47279 * 300.00405 * 11 10 9 40 40 H 0.96995 * 120.00015 * 359.72695 * 14 12 11 41 41 H 1.07994 * 120.01418 * 180.28628 * 19 17 16 42 42 H 1.08002 * 119.97855 * 179.72452 * 20 19 17 43 43 H 1.07990 * 119.97691 * 180.02562 * 21 20 19 44 44 H 1.08007 * 119.98277 * 0.02562 * 22 16 15 45 45 H 1.09004 * 113.61468 * 25.42984 * 23 15 14 46 46 H 1.08994 * 113.61597 * 156.33919 * 23 15 14 47 47 H 1.09004 * 113.61698 * 270.88364 * 27 24 23 48 48 H 1.09000 * 113.61432 * 139.98119 * 27 24 23 49 49 H 1.08002 * 120.03090 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7265 -0.0380 -2.1398 6 6 3.1895 -0.6872 -3.2696 7 6 2.8624 -2.0110 -3.4898 8 6 2.0598 -2.6863 -2.5815 9 8 1.7322 -3.9873 -2.7985 10 6 2.2443 -4.5959 -3.9857 11 6 1.7730 -6.0497 -4.0576 12 6 2.3124 -6.6913 -5.3099 13 8 3.0060 -6.0492 -6.0699 14 7 2.0241 -7.9788 -5.5854 15 6 2.5490 -8.6026 -6.8025 16 6 4.0264 -8.3707 -6.9887 17 6 4.6381 -8.7239 -8.1793 18 9 3.9113 -9.2771 -9.1748 19 6 5.9947 -8.5049 -8.3511 20 6 6.7383 -7.9452 -7.3298 21 6 6.1273 -7.5980 -6.1390 22 6 4.7722 -7.8105 -5.9688 23 6 1.7134 -8.3026 -8.0582 24 6 0.8866 -9.5517 -7.7105 25 1 0.0411 -9.3484 -7.0534 26 9 0.5353 -10.3195 -8.8260 27 6 2.1302 -10.0727 -6.9711 28 6 1.5974 -2.0331 -1.4486 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5137 0.8900 31 1 1.5613 2.4680 -1.2084 32 1 1.5877 2.4586 1.2243 33 1 2.9865 0.9959 -1.9675 34 1 3.8109 -0.1599 -3.9783 35 1 3.2280 -2.5189 -4.3700 36 1 3.3338 -4.5672 -3.9678 37 1 1.8808 -4.0529 -4.8582 38 1 0.6835 -6.0780 -4.0756 39 1 2.1360 -6.5929 -3.1852 40 1 1.4727 -8.4935 -4.9756 41 1 6.4721 -8.7757 -9.2811 42 1 7.7972 -7.7784 -7.4619 43 1 6.7092 -7.1603 -5.3415 44 1 4.2960 -7.5393 -5.0380 45 1 1.1478 -7.3730 -7.9944 46 1 2.2742 -8.3951 -8.9882 47 1 2.8050 -10.6492 -7.6040 48 1 1.9011 -10.5721 -6.0297 49 1 0.9762 -2.5580 -0.7379 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:30:37 Heat of formation + Delta-G solvation = -92.220561 kcal Electronic energy + Delta-G solvation = -35950.367350 eV Core-core repulsion = 30868.143612 eV Total energy + Delta-G solvation = -5082.223738 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -50.17946 -48.63652 -42.05907 -41.24667 -39.73935 -39.09347 -38.79243 -37.44765 -34.42866 -33.22123 -32.59984 -32.11493 -31.39962 -30.78483 -27.23425 -27.11961 -26.38707 -25.17860 -23.71428 -23.65659 -22.89071 -22.14690 -21.49768 -20.77358 -19.22542 -18.80584 -18.56888 -18.04256 -17.88500 -17.47081 -17.29208 -17.23384 -17.11783 -17.06095 -16.84267 -16.71692 -16.17654 -15.90142 -15.86501 -15.76207 -15.60858 -14.95944 -14.78087 -14.55829 -14.52524 -14.43634 -14.24669 -13.98111 -13.88484 -13.74578 -13.49300 -13.45270 -13.08792 -12.96674 -12.89884 -12.84463 -12.70277 -12.35359 -12.15727 -12.02321 -11.80204 -11.68768 -11.60060 -11.46172 -11.11714 -10.57219 -10.38856 -9.89953 -9.83823 -9.63586 -9.27104 -4.91476 0.09949 0.19481 0.22608 0.39049 1.28263 1.44213 1.55885 1.61688 1.95618 2.34836 2.52842 2.62673 3.06523 3.14209 3.20608 3.28881 3.36290 3.46018 3.54966 3.70820 3.74426 3.79701 3.84174 3.87350 3.90584 4.04018 4.10561 4.13538 4.23755 4.25942 4.31251 4.35373 4.37411 4.48690 4.49333 4.55234 4.59863 4.63247 4.68037 4.73476 4.76628 4.83961 4.97459 4.97613 5.00673 5.08015 5.24545 5.28999 5.37509 5.41464 5.45343 5.45414 5.68899 5.87702 6.31587 6.37639 6.58149 7.08896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.089 4.089 3 Si 0.770 3.230 4 C -0.048 4.048 5 C -0.160 4.160 6 C -0.076 4.076 7 C -0.210 4.210 8 C 0.119 3.881 9 O -0.323 6.323 10 C 0.073 3.927 11 C -0.132 4.132 12 C 0.520 3.480 13 O -0.554 6.554 14 N -0.695 5.695 15 C 0.201 3.799 16 C -0.113 4.113 17 C 0.081 3.919 18 F -0.142 7.142 19 C -0.165 4.165 20 C -0.092 4.092 21 C -0.136 4.136 22 C -0.064 4.064 23 C -0.182 4.182 24 C 0.070 3.930 25 H 0.140 0.860 26 F -0.221 7.221 27 C -0.146 4.146 28 C -0.142 4.142 29 H 0.396 0.604 30 H 0.098 0.902 31 H -0.300 1.300 32 H -0.284 1.284 33 H 0.145 0.855 34 H 0.154 0.846 35 H 0.139 0.861 36 H 0.071 0.929 37 H 0.061 0.939 38 H 0.126 0.874 39 H 0.132 0.868 40 H 0.426 0.574 41 H 0.147 0.853 42 H 0.155 0.845 43 H 0.147 0.853 44 H 0.131 0.869 45 H 0.079 0.921 46 H 0.102 0.898 47 H 0.098 0.902 48 H 0.122 0.878 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.059 -1.131 6.333 7.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.197 4.197 3 Si 0.675 3.325 4 C -0.048 4.048 5 C -0.177 4.177 6 C -0.094 4.094 7 C -0.229 4.229 8 C 0.074 3.926 9 O -0.237 6.237 10 C -0.002 4.002 11 C -0.171 4.171 12 C 0.308 3.692 13 O -0.432 6.432 14 N -0.350 5.350 15 C 0.113 3.887 16 C -0.115 4.115 17 C 0.061 3.939 18 F -0.120 7.120 19 C -0.183 4.183 20 C -0.109 4.109 21 C -0.154 4.154 22 C -0.082 4.082 23 C -0.221 4.221 24 C 0.034 3.966 25 H 0.158 0.842 26 F -0.201 7.201 27 C -0.184 4.184 28 C -0.161 4.161 29 H 0.246 0.754 30 H 0.116 0.884 31 H -0.227 1.227 32 H -0.212 1.212 33 H 0.162 0.838 34 H 0.171 0.829 35 H 0.157 0.843 36 H 0.089 0.911 37 H 0.080 0.920 38 H 0.144 0.856 39 H 0.150 0.850 40 H 0.266 0.734 41 H 0.164 0.836 42 H 0.173 0.827 43 H 0.165 0.835 44 H 0.149 0.851 45 H 0.098 0.902 46 H 0.120 0.880 47 H 0.117 0.883 48 H 0.140 0.860 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.254 -0.349 5.314 6.241 hybrid contribution -1.556 -0.388 -0.097 1.607 sum 1.698 -0.738 5.216 5.535 Atomic orbital electron populations 1.86547 1.18450 1.80782 1.51094 1.25092 0.84165 1.12142 0.98315 0.94032 0.90359 0.71683 0.76401 1.19296 0.96771 0.92998 0.95725 1.21122 1.00889 1.00614 0.95115 1.21229 0.97760 0.93547 0.96821 1.21541 1.03109 0.96967 1.01273 1.19081 0.95139 0.83596 0.94810 1.85944 1.71451 1.22619 1.43723 1.22454 0.99239 0.93100 0.85412 1.21443 1.05008 0.93952 0.96735 1.20604 0.79582 0.81712 0.87339 1.90834 1.38351 1.63142 1.50850 1.45503 1.53807 1.11932 1.23710 1.19452 0.88591 0.94532 0.86089 1.19603 0.95140 1.02933 0.93846 1.17649 0.90444 1.00230 0.85546 1.91384 1.77131 1.83220 1.60314 1.21379 0.91966 1.02896 1.02088 1.21355 1.01304 0.96109 0.92163 1.21512 0.94791 1.00392 0.98740 1.20978 0.93872 0.95133 0.98227 1.24373 0.98813 0.99148 0.99741 1.23320 0.97855 0.90134 0.85296 0.84211 1.92796 1.93894 1.77410 1.56029 1.23956 0.96792 0.94073 1.03543 1.20320 1.03527 0.94711 0.97557 0.75372 0.88448 1.22738 1.21161 0.83768 0.82869 0.84280 0.91069 0.92043 0.85618 0.85004 0.73405 0.83569 0.82700 0.83540 0.85144 0.90235 0.87970 0.88334 0.85981 0.85337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.75 12.74 -148.98 -1.90 -3.65 16 2 C -0.09 -0.02 2.81 71.24 0.20 0.18 16 3 Si 0.77 -1.40 29.79 68.60 2.04 0.64 16 4 C -0.05 -0.19 5.42 -19.88 -0.11 -0.29 16 5 C -0.16 -0.29 8.67 22.28 0.19 -0.09 16 6 C -0.08 -0.09 10.04 22.25 0.22 0.13 16 7 C -0.21 -0.67 9.04 22.37 0.20 -0.47 16 8 C 0.12 0.64 6.69 22.51 0.15 0.79 16 9 O -0.32 -1.12 10.14 -92.40 -0.94 -2.05 16 10 C 0.07 -0.06 4.03 71.98 0.29 0.23 16 11 C -0.13 0.91 6.07 29.85 0.18 1.09 16 12 C 0.52 -1.39 5.76 87.66 0.50 -0.88 16 13 O -0.55 -3.15 13.17 -3.03 -0.04 -3.19 16 14 N -0.70 4.46 4.85 -423.92 -2.06 2.41 16 15 C 0.20 -0.18 1.07 3.39 0.00 -0.17 16 16 C -0.11 -0.39 4.57 -19.82 -0.09 -0.48 16 17 C 0.08 0.46 6.71 22.38 0.15 0.61 16 18 F -0.14 -1.07 12.93 44.97 0.58 -0.48 16 19 C -0.16 -0.50 10.03 22.32 0.22 -0.28 16 20 C -0.09 -0.03 10.04 22.26 0.22 0.19 16 21 C -0.14 -0.09 10.04 22.27 0.22 0.14 16 22 C -0.06 -0.13 7.38 22.26 0.16 0.03 16 23 C -0.18 -0.45 6.98 31.12 0.22 -0.23 16 24 C 0.07 -0.08 5.58 31.12 0.17 0.09 16 25 H 0.14 -1.02 8.14 -2.39 -0.02 -1.04 16 26 F -0.22 -1.40 17.41 44.97 0.78 -0.62 16 27 C -0.15 0.47 6.93 31.12 0.22 0.68 16 28 C -0.14 -0.84 9.55 22.36 0.21 -0.63 16 29 H 0.40 -2.10 8.74 -74.06 -0.65 -2.75 16 30 H 0.10 -0.37 7.96 -2.39 -0.02 -0.39 16 31 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 32 H -0.28 -0.55 7.11 99.48 0.71 0.16 16 33 H 0.15 -0.35 4.87 -2.91 -0.01 -0.37 16 34 H 0.15 -0.60 8.06 -2.91 -0.02 -0.62 16 35 H 0.14 0.14 6.30 -2.91 -0.02 0.13 16 36 H 0.07 -0.03 7.61 -2.38 -0.02 -0.05 16 37 H 0.06 0.09 7.63 -2.38 -0.02 0.07 16 38 H 0.13 -1.23 8.14 -2.38 -0.02 -1.25 16 39 H 0.13 -1.47 8.14 -2.39 -0.02 -1.49 16 40 H 0.43 -5.84 8.63 -92.71 -0.80 -6.64 16 41 H 0.15 0.00 8.06 -2.91 -0.02 -0.02 16 42 H 0.16 -0.74 8.06 -2.91 -0.02 -0.77 16 43 H 0.15 -0.54 8.06 -2.92 -0.02 -0.57 16 44 H 0.13 -0.06 5.55 -2.91 -0.02 -0.07 16 45 H 0.08 0.26 8.14 -2.38 -0.02 0.24 16 46 H 0.10 0.70 5.25 -2.39 -0.01 0.68 16 47 H 0.10 0.04 6.90 -2.39 -0.02 0.03 16 48 H 0.12 -1.15 8.12 -2.39 -0.02 -1.16 16 49 H 0.13 0.71 8.06 -2.91 -0.02 0.69 16 Total: 0.00 -24.17 403.08 1.65 -22.52 By element: Atomic # 1 Polarization: -15.82 SS G_CDS: -0.38 Total: -16.20 kcal Atomic # 6 Polarization: -2.93 SS G_CDS: 3.56 Total: 0.62 kcal Atomic # 7 Polarization: 4.46 SS G_CDS: -2.06 Total: 2.41 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -2.87 Total: -8.89 kcal Atomic # 9 Polarization: -2.47 SS G_CDS: 1.36 Total: -1.10 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: 2.04 Total: 0.64 kcal Total: -24.17 1.65 -22.52 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.700 kcal (2) G-P(sol) polarization free energy of solvation -24.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.520 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds