Wall clock time and date at job start Sun Mar 7 2021 08:31:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.46778 * 2 1 4 4 C 1.50702 * 109.47564 * 240.00454 * 2 1 3 5 5 C 1.38245 * 119.94108 * 299.99834 * 4 2 1 6 6 C 1.38164 * 120.05418 * 179.97438 * 5 4 2 7 7 N 1.48009 * 120.02745 * 180.02562 * 6 5 4 8 8 O 1.21800 * 119.99895 * 359.97438 * 7 6 5 9 9 O 1.21797 * 120.00231 * 179.97438 * 7 6 5 10 10 C 1.38709 * 119.94753 * 0.02562 * 6 5 4 11 11 O 1.35895 * 120.05816 * 179.97438 * 10 6 5 12 12 C 1.42902 * 117.00109 * 180.02562 * 11 10 6 13 13 C 1.50703 * 109.47094 * 179.97438 * 12 11 10 14 14 O 1.21277 * 120.00130 * 359.97438 * 13 12 11 15 15 N 1.34776 * 119.99757 * 179.97438 * 13 12 11 16 16 C 1.46496 * 119.99912 * 180.02562 * 15 13 12 17 17 C 1.50699 * 112.85278 * 50.32991 * 16 15 13 18 18 C 1.38435 * 120.01190 * 73.95041 * 17 16 15 19 19 F 1.35099 * 120.02798 * 0.02562 * 18 17 16 20 20 C 1.38483 * 119.94870 * 180.25570 * 18 17 16 21 21 C 1.38180 * 119.97469 * 359.74789 * 20 18 17 22 22 C 1.38266 * 120.02422 * 0.02562 * 21 20 18 23 23 C 1.38220 * 120.01517 * 253.70240 * 17 16 15 24 24 C 1.53789 * 113.68860 * 279.06523 * 16 15 13 25 25 C 1.53783 * 87.07968 * 270.87028 * 24 16 15 26 26 H 1.09000 * 113.61363 * 89.11641 * 25 24 16 27 27 F 1.39893 * 113.61749 * 220.02002 * 25 24 16 28 28 C 1.53784 * 87.08240 * 334.56693 * 25 24 16 29 29 C 1.38759 * 119.88488 * 0.25101 * 10 6 5 30 30 C 1.38116 * 119.94290 * 359.46965 * 29 10 6 31 31 H 0.96701 * 114.00015 * 299.99260 * 1 2 3 32 32 H 1.08997 * 109.47498 * 120.00152 * 2 1 3 33 33 H 1.48492 * 110.00181 * 300.00245 * 3 2 1 34 34 H 1.48504 * 110.00038 * 61.32324 * 3 2 1 35 35 H 1.08000 * 119.96991 * 359.97438 * 5 4 2 36 36 H 1.08998 * 109.47269 * 59.99886 * 12 11 10 37 37 H 1.08998 * 109.46613 * 299.99372 * 12 11 10 38 38 H 0.96996 * 120.00251 * 359.97438 * 15 13 12 39 39 H 1.08001 * 120.01445 * 179.72266 * 20 18 17 40 40 H 1.08000 * 119.98623 * 180.02562 * 21 20 18 41 41 H 1.07995 * 119.97326 * 180.02562 * 22 21 20 42 42 H 1.08004 * 119.98710 * 0.02562 * 23 17 16 43 43 H 1.09000 * 113.61514 * 25.41715 * 24 16 15 44 44 H 1.09000 * 113.61406 * 156.32587 * 24 16 15 45 45 H 1.08994 * 113.61568 * 270.88671 * 28 25 24 46 46 H 1.09001 * 113.61569 * 139.97940 * 28 25 24 47 47 H 1.07999 * 120.02498 * 179.73236 * 29 10 6 48 48 H 1.08006 * 119.97345 * 180.27646 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.5968 -2.0339 -1.4482 6 6 2.0557 -2.6872 -2.5758 7 7 1.6967 -4.1041 -2.8085 8 8 0.9967 -4.6947 -2.0056 9 8 2.1011 -4.6794 -3.8029 10 6 2.8533 -2.0142 -3.4896 11 8 3.3063 -2.6547 -4.5991 12 6 4.1233 -1.8996 -5.4961 13 6 4.5287 -2.7686 -6.6587 14 8 4.1553 -3.9211 -6.7135 15 7 5.3063 -2.2649 -7.6375 16 6 5.7000 -3.1094 -8.7679 17 6 4.5315 -3.8158 -9.4056 18 6 3.6424 -3.1083 -10.1964 19 9 3.8219 -1.7845 -10.3975 20 6 2.5661 -3.7577 -10.7774 21 6 2.3837 -5.1119 -10.5715 22 6 3.2750 -5.8183 -9.7852 23 6 4.3499 -5.1713 -9.2052 24 6 6.8881 -4.0367 -8.4621 25 6 7.8012 -2.8916 -8.9311 26 1 8.0839 -2.2041 -8.1339 27 9 8.8935 -3.3216 -9.6921 28 6 6.6161 -2.3987 -9.7782 29 6 3.1925 -0.6874 -3.2658 30 6 2.7264 -0.0371 -2.1400 31 1 -0.3933 0.4416 0.7651 32 1 1.7924 -0.5138 0.8899 33 1 1.5613 2.4679 -1.2084 34 1 1.5878 2.4586 1.2243 35 1 0.9762 -2.5575 -0.7362 36 1 5.0149 -1.5547 -4.9725 37 1 3.5618 -1.0403 -5.8628 38 1 5.6047 -1.3430 -7.5938 39 1 1.8693 -3.2059 -11.3910 40 1 1.5446 -5.6186 -11.0249 41 1 3.1318 -6.8767 -9.6252 42 1 5.0455 -5.7241 -8.5912 43 1 6.9950 -4.2749 -7.4038 44 1 6.9299 -4.9183 -9.1017 45 1 6.5835 -2.8326 -10.7775 46 1 6.5034 -1.3146 -9.7824 47 1 3.8169 -0.1625 -3.9736 48 1 2.9864 0.9969 -1.9677 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:31:08 Heat of formation + Delta-G solvation = -91.060615 kcal Electronic energy + Delta-G solvation = -41291.213233 eV Core-core repulsion = 35533.560977 eV Total energy + Delta-G solvation = -5757.652256 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.126 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -49.93141 -48.61079 -43.29685 -41.98794 -41.46440 -40.01500 -39.27036 -38.55780 -37.63191 -37.48678 -34.38615 -33.50156 -32.37682 -32.20742 -31.45096 -29.83579 -27.82200 -27.28840 -26.62956 -25.86499 -24.16172 -23.61281 -22.98148 -22.69982 -21.97818 -20.66415 -20.39038 -19.78290 -19.11278 -18.80998 -18.73590 -18.60792 -18.42388 -17.88668 -17.57702 -17.36033 -17.27608 -16.96759 -16.81651 -16.58460 -16.45604 -15.96281 -15.89774 -15.81058 -15.58195 -15.50410 -15.23381 -15.03415 -14.37940 -14.25274 -14.23772 -14.09999 -13.85494 -13.74984 -13.60996 -13.37698 -13.29784 -13.14828 -13.02638 -12.71764 -12.69580 -12.44192 -12.34766 -12.27225 -12.16362 -12.12810 -11.91524 -11.68506 -11.41721 -11.07720 -10.83660 -10.62294 -10.30749 -9.88608 -9.77614 -9.67264 -4.93920 -1.30694 -0.24576 0.09170 0.15955 0.23320 0.34813 1.16442 1.25226 1.45386 1.62536 1.97341 2.02271 2.21391 2.61036 3.02074 3.05601 3.13633 3.20033 3.22271 3.29423 3.35861 3.38979 3.53271 3.59044 3.69734 3.81510 3.85590 3.87930 3.93828 3.99847 4.03787 4.13763 4.23481 4.32114 4.34273 4.40265 4.50603 4.52312 4.60512 4.61778 4.64491 4.78124 4.85284 4.86420 5.02822 5.05044 5.06847 5.13263 5.18697 5.29858 5.40047 5.46261 5.74092 5.89670 6.38925 6.43523 6.52465 7.12995 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.094 4.094 3 Si 0.786 3.214 4 C -0.112 4.112 5 C -0.005 4.005 6 C -0.104 4.104 7 N 0.035 4.965 8 O -0.207 6.207 9 O -0.167 6.167 10 C 0.194 3.806 11 O -0.288 6.288 12 C 0.024 3.976 13 C 0.509 3.491 14 O -0.534 6.534 15 N -0.691 5.691 16 C 0.201 3.799 17 C -0.120 4.120 18 C 0.094 3.906 19 F -0.138 7.138 20 C -0.172 4.172 21 C -0.091 4.091 22 C -0.142 4.142 23 C -0.060 4.060 24 C -0.163 4.163 25 C 0.072 3.928 26 H 0.143 0.857 27 F -0.220 7.220 28 C -0.145 4.145 29 C -0.189 4.189 30 C -0.007 4.007 31 H 0.399 0.601 32 H 0.100 0.900 33 H -0.280 1.280 34 H -0.291 1.291 35 H 0.151 0.849 36 H 0.149 0.851 37 H 0.136 0.864 38 H 0.426 0.574 39 H 0.147 0.853 40 H 0.152 0.848 41 H 0.142 0.858 42 H 0.130 0.870 43 H 0.086 0.914 44 H 0.099 0.901 45 H 0.100 0.900 46 H 0.115 0.885 47 H 0.207 0.793 48 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.187 12.079 2.113 13.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.201 4.201 3 Si 0.688 3.312 4 C -0.114 4.114 5 C -0.024 4.024 6 C -0.189 4.189 7 N 0.546 4.454 8 O -0.413 6.413 9 O -0.382 6.382 10 C 0.144 3.856 11 O -0.197 6.197 12 C -0.053 4.053 13 C 0.294 3.706 14 O -0.408 6.408 15 N -0.347 5.347 16 C 0.113 3.887 17 C -0.122 4.122 18 C 0.075 3.925 19 F -0.117 7.117 20 C -0.190 4.190 21 C -0.109 4.109 22 C -0.160 4.160 23 C -0.079 4.079 24 C -0.202 4.202 25 C 0.036 3.964 26 H 0.160 0.840 27 F -0.201 7.201 28 C -0.183 4.183 29 C -0.207 4.207 30 C -0.024 4.024 31 H 0.251 0.749 32 H 0.117 0.883 33 H -0.207 1.207 34 H -0.219 1.219 35 H 0.168 0.832 36 H 0.167 0.833 37 H 0.153 0.847 38 H 0.265 0.735 39 H 0.164 0.836 40 H 0.169 0.831 41 H 0.159 0.841 42 H 0.148 0.852 43 H 0.105 0.895 44 H 0.118 0.882 45 H 0.119 0.881 46 H 0.133 0.867 47 H 0.224 0.776 48 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 5.951 12.231 1.579 13.693 hybrid contribution -1.616 -0.675 0.459 1.811 sum 4.334 11.556 2.038 12.510 Atomic orbital electron populations 1.86545 1.18454 1.81005 1.51296 1.25232 0.84374 1.13056 0.97441 0.94245 0.89271 0.70215 0.77419 1.19465 1.01182 0.91998 0.98706 1.20830 0.93915 0.94849 0.92825 1.20823 1.13423 0.81685 1.03012 1.43843 0.98237 1.03877 0.99480 1.94502 1.36228 1.68262 1.42276 1.94664 1.56138 1.69245 1.18169 1.18918 0.89698 0.91989 0.84969 1.86457 1.63627 1.39496 1.30167 1.23099 0.98255 0.94362 0.89586 1.20440 0.78398 0.88081 0.83657 1.90863 1.53435 1.19313 1.77220 1.45348 1.52616 1.16199 1.20556 1.19505 0.89817 0.92246 0.87086 1.19658 0.97797 0.94699 1.00066 1.17623 0.96989 0.77866 1.00031 1.91464 1.95119 1.31416 1.93685 1.21391 0.98305 0.96272 1.03075 1.21352 0.99322 0.93222 0.96964 1.21511 0.94959 1.01604 0.97955 1.21003 0.97539 0.93234 0.96080 1.24069 0.93784 0.98490 1.03861 1.23303 0.81579 0.97467 0.94035 0.83973 1.92802 1.57886 1.91274 1.78109 1.23929 0.92208 1.03558 0.98576 1.21783 1.06153 0.90618 1.02135 1.21658 0.89967 1.01025 0.89795 0.74949 0.88267 1.20728 1.21865 0.83163 0.83312 0.84673 0.73482 0.83555 0.83059 0.84060 0.85183 0.89510 0.88246 0.88127 0.86697 0.77582 0.79715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.98 12.74 -148.98 -1.90 -0.92 16 2 C -0.09 0.59 2.81 71.24 0.20 0.79 16 3 Si 0.79 -7.86 29.78 68.60 2.04 -5.82 16 4 C -0.11 0.40 5.42 -19.85 -0.11 0.29 16 5 C -0.01 -0.02 9.11 22.25 0.20 0.19 16 6 C -0.10 -0.81 6.87 36.47 0.25 -0.56 16 7 N 0.04 0.59 4.45 -46.24 -0.21 0.38 16 8 O -0.21 -3.88 18.45 18.89 0.35 -3.53 16 9 O -0.17 -3.50 17.24 25.61 0.44 -3.05 16 10 C 0.19 0.20 6.67 22.51 0.15 0.35 16 11 O -0.29 -1.10 7.68 -63.35 -0.49 -1.59 16 12 C 0.02 -0.19 5.22 71.24 0.37 0.18 16 13 C 0.51 -0.29 7.66 87.66 0.67 0.38 16 14 O -0.53 -5.83 14.20 16.02 0.23 -5.60 16 15 N -0.69 4.63 5.21 -423.92 -2.21 2.42 16 16 C 0.20 -0.43 0.62 3.39 0.00 -0.43 16 17 C -0.12 -0.46 3.89 -19.82 -0.08 -0.53 16 18 C 0.09 0.43 7.10 22.38 0.16 0.59 16 19 F -0.14 -0.44 16.14 44.97 0.73 0.28 16 20 C -0.17 -0.66 10.03 22.31 0.22 -0.44 16 21 C -0.09 -0.29 10.04 22.26 0.22 -0.06 16 22 C -0.14 -0.66 10.04 22.27 0.22 -0.44 16 23 C -0.06 -0.34 7.61 22.26 0.17 -0.17 16 24 C -0.16 0.29 6.32 31.12 0.20 0.48 16 25 C 0.07 -0.34 5.58 31.12 0.17 -0.17 16 26 H 0.14 -1.57 8.14 -2.39 -0.02 -1.59 16 27 F -0.22 -0.57 17.41 44.97 0.78 0.21 16 28 C -0.14 0.74 6.32 31.12 0.20 0.93 16 29 C -0.19 1.83 9.04 22.37 0.20 2.03 16 30 C -0.01 0.07 8.66 22.25 0.19 0.26 16 31 H 0.40 -3.77 8.74 -74.06 -0.65 -4.42 16 32 H 0.10 -0.94 7.96 -2.39 -0.02 -0.96 16 33 H -0.28 1.35 7.11 99.48 0.71 2.06 16 34 H -0.29 1.11 7.11 99.48 0.71 1.82 16 35 H 0.15 0.71 7.61 -2.91 -0.02 0.69 16 36 H 0.15 -2.60 7.65 -2.39 -0.02 -2.62 16 37 H 0.14 -2.02 7.67 -2.39 -0.02 -2.04 16 38 H 0.43 -6.53 8.63 -92.71 -0.80 -7.33 16 39 H 0.15 0.06 8.06 -2.91 -0.02 0.04 16 40 H 0.15 -0.24 8.06 -2.91 -0.02 -0.26 16 41 H 0.14 0.21 8.06 -2.91 -0.02 0.18 16 42 H 0.13 0.69 6.84 -2.91 -0.02 0.67 16 43 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 44 H 0.10 0.01 7.25 -2.39 -0.02 0.00 16 45 H 0.10 -0.22 8.09 -2.39 -0.02 -0.24 16 46 H 0.11 -1.10 8.11 -2.39 -0.02 -1.12 16 47 H 0.21 -4.15 6.30 -2.91 -0.02 -4.17 16 48 H 0.19 -3.14 4.87 -2.91 -0.01 -3.16 16 Total: 0.00 -39.14 416.72 3.06 -36.07 By element: Atomic # 1 Polarization: -22.22 SS G_CDS: -0.33 Total: -22.54 kcal Atomic # 6 Polarization: 0.05 SS G_CDS: 3.63 Total: 3.68 kcal Atomic # 7 Polarization: 5.22 SS G_CDS: -2.42 Total: 2.80 kcal Atomic # 8 Polarization: -13.32 SS G_CDS: -1.37 Total: -14.69 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 1.51 Total: 0.50 kcal Atomic # 14 Polarization: -7.86 SS G_CDS: 2.04 Total: -5.82 kcal Total: -39.14 3.06 -36.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.988 kcal (2) G-P(sol) polarization free energy of solvation -39.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.065 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds