Wall clock time and date at job start Sun Mar 7 2021 08:31:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35978 * 117.00136 * 2 1 4 4 C 1.38677 * 120.00317 * 180.27620 * 3 2 1 5 5 C 1.38154 * 120.00350 * 180.27853 * 4 3 2 6 6 C 1.50699 * 120.00237 * 179.72459 * 5 4 3 7 7 O 1.42895 * 109.47158 * 104.72228 * 6 5 4 8 8 Si 1.86300 * 109.46944 * 344.72748 * 6 5 4 9 9 C 1.38671 * 119.99786 * 359.45216 * 5 4 3 10 10 O 1.35980 * 120.00478 * 180.25927 * 9 5 4 11 11 C 1.42893 * 117.00399 * 179.97438 * 10 9 5 12 12 C 1.50705 * 109.46946 * 179.97438 * 11 10 9 13 13 O 1.21276 * 120.00239 * 359.97438 * 12 11 10 14 14 N 1.34780 * 119.99677 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99693 * 180.02562 * 14 12 11 16 16 C 1.50702 * 112.85077 * 311.19521 * 15 14 12 17 17 C 1.38439 * 120.01227 * 170.33631 * 16 15 14 18 18 F 1.35092 * 120.02780 * 359.97438 * 17 16 15 19 19 C 1.38484 * 119.94325 * 180.02562 * 17 16 15 20 20 C 1.38168 * 119.97814 * 359.97438 * 19 17 16 21 21 C 1.38269 * 120.02700 * 0.02562 * 20 19 17 22 22 C 1.38222 * 120.04998 * 359.72135 * 21 20 19 23 23 C 1.53787 * 113.61335 * 179.97438 * 15 14 12 24 24 C 1.53784 * 87.07912 * 270.88150 * 23 15 14 25 25 H 1.09004 * 113.61335 * 89.11677 * 24 23 15 26 26 F 1.39896 * 113.61191 * 219.93255 * 24 23 15 27 27 C 1.53776 * 113.61513 * 82.50069 * 15 14 12 28 28 C 1.38720 * 120.00231 * 0.27388 * 9 5 4 29 29 C 1.38117 * 119.99973 * 0.02562 * 28 9 5 30 30 H 1.08999 * 109.47543 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46973 * 299.99860 * 1 2 3 32 32 H 1.09004 * 109.47221 * 59.99654 * 1 2 3 33 33 H 1.08005 * 119.99991 * 0.02962 * 4 3 2 34 34 H 1.09000 * 109.47247 * 224.72681 * 6 5 4 35 35 H 0.96698 * 114.00355 * 300.00487 * 7 6 5 36 36 H 1.48506 * 110.00048 * 180.02562 * 8 6 5 37 37 H 1.48502 * 109.99996 * 301.31619 * 8 6 5 38 38 H 1.08996 * 109.47263 * 299.99213 * 11 10 9 39 39 H 1.09000 * 109.47636 * 60.00064 * 11 10 9 40 40 H 0.96993 * 120.00275 * 359.97438 * 14 12 11 41 41 H 1.08006 * 120.00786 * 179.97438 * 19 17 16 42 42 H 1.08004 * 119.99243 * 179.97438 * 20 19 17 43 43 H 1.08001 * 119.97709 * 179.97438 * 21 20 19 44 44 H 1.07997 * 119.98955 * 180.27646 * 22 21 20 45 45 H 1.08998 * 113.61504 * 25.43121 * 23 15 14 46 46 H 1.08997 * 113.61164 * 156.24779 * 23 15 14 47 47 H 1.09005 * 113.61719 * 203.66188 * 27 15 14 48 48 H 1.09000 * 113.61827 * 334.56828 * 27 15 14 49 49 H 1.08000 * 120.00266 * 179.97438 * 28 9 5 50 50 H 1.07992 * 120.00119 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 -0.0058 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5940 0.0000 7 8 6.0208 2.9671 -1.3013 8 14 6.2723 0.9321 0.4544 9 6 3.3033 3.6781 0.0002 10 8 3.9205 4.8897 0.0006 11 6 3.0806 6.0458 0.0001 12 6 3.9349 7.2873 0.0013 13 8 5.1439 7.1916 0.0029 14 7 3.3553 8.5041 0.0016 15 6 4.1857 9.7110 0.0022 16 6 5.2708 9.6743 1.0474 17 6 6.2625 10.6402 1.0502 18 9 6.2585 11.6159 0.1158 19 6 7.2592 10.6048 2.0109 20 6 7.2626 9.6061 2.9657 21 6 6.2716 8.6419 2.9619 22 6 5.2732 8.6791 2.0067 23 6 3.3740 11.0172 0.0019 24 6 3.3961 10.9384 -1.5337 25 1 2.5624 10.3759 -1.9541 26 9 3.5843 12.1772 -2.1558 27 6 4.6866 10.1148 -1.3945 28 6 1.9180 3.6056 0.0002 29 6 1.2909 2.3750 0.0007 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 4.0195 0.3784 -0.0108 34 1 5.8883 3.3386 0.7267 35 1 5.7675 2.3482 -1.9998 36 1 7.7559 0.9967 0.4586 37 1 5.7788 0.5181 1.7924 38 1 2.4520 6.0378 -0.8902 39 1 2.4508 6.0378 0.8897 40 1 2.3884 8.5807 0.0008 41 1 8.0336 11.3576 2.0138 42 1 8.0401 9.5780 3.7149 43 1 6.2752 7.8613 3.7083 44 1 4.4972 7.9281 2.0073 45 1 2.3773 10.9120 0.4302 46 1 3.9198 11.8705 0.4046 47 1 5.5919 10.7216 -1.3752 48 1 4.7496 9.2810 -2.0937 49 1 1.3298 4.5114 0.0007 50 1 0.2124 2.3185 0.0003 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17636826_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:31:27 Heat of formation + Delta-G solvation = -117.565136 kcal Electronic energy + Delta-G solvation = -39471.380861 eV Core-core repulsion = 34069.375907 eV Total energy + Delta-G solvation = -5402.004954 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -50.03647 -48.52608 -42.15385 -41.62670 -40.24026 -39.39342 -38.84574 -38.04174 -36.87065 -34.46031 -32.83038 -32.25774 -31.34735 -31.07974 -29.49093 -28.12077 -27.24022 -26.59088 -26.04902 -24.01081 -23.57758 -22.84313 -22.45883 -21.99555 -20.81069 -19.64601 -18.88032 -18.68204 -18.61900 -17.93626 -17.72230 -17.52700 -17.19735 -17.11337 -17.05758 -16.83147 -16.74900 -16.66633 -16.12269 -15.95980 -15.86476 -15.79669 -15.54621 -15.34796 -15.14542 -14.85510 -14.66303 -14.34484 -14.27383 -14.08140 -13.97808 -13.79510 -13.58975 -13.55959 -13.52751 -13.08430 -12.99063 -12.83093 -12.77209 -12.61711 -12.30030 -12.13408 -11.96555 -11.80497 -11.61161 -11.52756 -11.47376 -11.01171 -10.45644 -10.29072 -10.15299 -9.77943 -9.56562 -8.83256 -4.95380 0.01862 0.16344 0.29189 0.33391 1.23910 1.34272 1.36638 1.72974 2.06551 2.20868 2.39921 2.52170 2.56534 3.00752 3.11510 3.22372 3.26165 3.33319 3.47741 3.50789 3.61209 3.63751 3.66594 3.74137 3.80294 3.83237 3.92477 3.98816 4.04420 4.07753 4.10303 4.13527 4.29489 4.31458 4.38291 4.43357 4.47899 4.51162 4.53008 4.54805 4.59604 4.77895 4.82647 4.94347 4.97645 5.05930 5.08879 5.10166 5.15330 5.30937 5.36541 5.41199 5.48571 5.91659 6.03770 6.19169 6.35872 6.73545 6.95613 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.100 3.900 4 C -0.107 4.107 5 C -0.107 4.107 6 C -0.055 4.055 7 O -0.529 6.529 8 Si 0.680 3.320 9 C 0.116 3.884 10 O -0.276 6.276 11 C 0.040 3.960 12 C 0.511 3.489 13 O -0.483 6.483 14 N -0.711 5.711 15 C 0.202 3.798 16 C -0.106 4.106 17 C 0.106 3.894 18 F -0.132 7.132 19 C -0.153 4.153 20 C -0.087 4.087 21 C -0.129 4.129 22 C -0.054 4.054 23 C -0.153 4.153 24 C 0.071 3.929 25 H 0.110 0.890 26 F -0.199 7.199 27 C -0.175 4.175 28 C -0.170 4.170 29 C -0.162 4.162 30 H 0.103 0.897 31 H 0.055 0.945 32 H 0.056 0.944 33 H 0.145 0.855 34 H 0.117 0.883 35 H 0.374 0.626 36 H -0.252 1.252 37 H -0.256 1.256 38 H 0.095 0.905 39 H 0.092 0.908 40 H 0.407 0.593 41 H 0.138 0.862 42 H 0.134 0.866 43 H 0.128 0.872 44 H 0.121 0.879 45 H 0.092 0.908 46 H 0.114 0.886 47 H 0.124 0.876 48 H 0.087 0.913 49 H 0.133 0.867 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.829 -2.836 1.244 8.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.055 3.945 4 C -0.125 4.125 5 C -0.109 4.109 6 C -0.166 4.166 7 O -0.334 6.334 8 Si 0.582 3.418 9 C 0.070 3.930 10 O -0.188 6.188 11 C -0.039 4.039 12 C 0.296 3.704 13 O -0.354 6.354 14 N -0.367 5.367 15 C 0.115 3.885 16 C -0.108 4.108 17 C 0.086 3.914 18 F -0.110 7.110 19 C -0.172 4.172 20 C -0.105 4.105 21 C -0.147 4.147 22 C -0.073 4.073 23 C -0.191 4.191 24 C 0.035 3.965 25 H 0.128 0.872 26 F -0.180 7.180 27 C -0.214 4.214 28 C -0.189 4.189 29 C -0.180 4.180 30 H 0.121 0.879 31 H 0.074 0.926 32 H 0.075 0.925 33 H 0.162 0.838 34 H 0.134 0.866 35 H 0.221 0.779 36 H -0.177 1.177 37 H -0.180 1.180 38 H 0.113 0.887 39 H 0.110 0.890 40 H 0.243 0.757 41 H 0.156 0.844 42 H 0.151 0.849 43 H 0.146 0.854 44 H 0.139 0.861 45 H 0.110 0.890 46 H 0.133 0.867 47 H 0.142 0.858 48 H 0.105 0.895 49 H 0.151 0.849 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.890 -2.969 2.096 6.921 hybrid contribution -1.411 0.972 -0.002 1.714 sum -7.301 -1.997 2.094 7.853 Atomic orbital electron populations 1.23099 0.78054 1.04388 1.01331 1.86108 1.21546 1.26194 1.88953 1.18783 0.91897 0.84563 0.99266 1.20069 0.91718 0.96656 1.04082 1.19488 0.96716 0.89948 1.04708 1.24922 0.90794 1.11289 0.89586 1.86611 1.77908 1.52995 1.15844 0.95091 0.80725 0.80233 0.85797 1.18612 0.90468 0.84855 0.99027 1.86246 1.33092 1.10717 1.88779 1.22428 0.93119 0.84440 1.03960 1.20034 0.89202 0.83905 0.77305 1.90889 1.13693 1.86106 1.44732 1.45503 1.09964 1.04004 1.77212 1.19527 0.90301 0.84533 0.94169 1.19382 0.96699 0.96757 0.97923 1.17326 0.96774 0.87804 0.89498 1.91402 1.96217 1.60563 1.62846 1.21122 0.98952 1.01327 0.95767 1.21059 0.98313 0.93436 0.97724 1.21193 0.94972 0.99255 0.99273 1.20777 0.98352 0.95581 0.92544 1.24030 1.01844 0.96966 0.96291 1.23010 0.99559 0.81812 0.92117 0.87190 1.92840 1.96364 1.44567 1.84215 1.24421 0.99927 1.01184 0.95832 1.21054 0.92924 0.98690 1.06241 1.21093 1.00325 0.91519 1.05103 0.87887 0.92623 0.92535 0.83775 0.86579 0.77940 1.17679 1.18018 0.88748 0.88976 0.75712 0.84425 0.84852 0.85379 0.86084 0.88969 0.86749 0.85783 0.89463 0.84949 0.84734 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.16 10.50 -19.67 -0.21 -0.36 16 3 C 0.10 0.06 6.69 -39.24 -0.26 -0.20 16 4 C -0.11 -0.06 8.59 -39.45 -0.34 -0.39 16 5 C -0.11 -0.15 5.27 -104.49 -0.55 -0.70 16 6 C -0.06 -0.10 2.37 36.01 0.09 -0.02 16 7 O -0.53 -1.39 12.88 -35.23 -0.45 -1.84 16 8 Si 0.68 0.26 29.92 -169.99 -5.09 -4.83 16 9 C 0.12 0.16 6.66 -39.24 -0.26 -0.10 16 10 O -0.28 -0.64 9.00 -39.59 -0.36 -1.00 16 11 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 12 C 0.51 0.23 5.84 -10.98 -0.06 0.16 16 13 O -0.48 -2.54 13.70 -14.35 -0.20 -2.73 16 14 N -0.71 1.57 4.85 -47.92 -0.23 1.34 16 15 C 0.20 0.00 1.07 -132.16 -0.14 -0.14 16 16 C -0.11 -0.23 4.56 -104.55 -0.48 -0.71 16 17 C 0.11 0.29 6.71 -39.42 -0.26 0.03 16 18 F -0.13 -0.41 12.93 2.25 0.03 -0.38 16 19 C -0.15 -0.27 10.03 -39.52 -0.40 -0.67 16 20 C -0.09 -0.10 10.04 -39.60 -0.40 -0.50 16 21 C -0.13 -0.21 10.04 -39.58 -0.40 -0.61 16 22 C -0.05 -0.12 7.39 -39.59 -0.29 -0.41 16 23 C -0.15 0.20 6.94 -25.91 -0.18 0.02 16 24 C 0.07 -0.03 5.57 -25.95 -0.14 -0.17 16 25 H 0.11 -0.32 8.14 -51.93 -0.42 -0.75 16 26 F -0.20 -0.57 17.41 2.25 0.04 -0.53 16 27 C -0.18 -0.21 6.98 -25.95 -0.18 -0.39 16 28 C -0.17 0.13 9.03 -39.45 -0.36 -0.22 16 29 C -0.16 0.12 9.03 -39.45 -0.36 -0.24 16 30 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 31 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 32 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 33 H 0.15 -0.18 5.14 -52.48 -0.27 -0.45 16 34 H 0.12 0.41 7.82 -51.93 -0.41 0.01 16 35 H 0.37 -0.65 8.70 45.56 0.40 -0.25 16 36 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 37 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 38 H 0.09 -0.39 7.66 -51.93 -0.40 -0.78 16 39 H 0.09 -0.41 7.66 -51.93 -0.40 -0.81 16 40 H 0.41 -2.41 8.63 -40.82 -0.35 -2.76 16 41 H 0.14 0.01 8.06 -52.48 -0.42 -0.41 16 42 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 43 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 44 H 0.12 0.16 5.58 -52.49 -0.29 -0.13 16 45 H 0.09 -0.35 8.12 -51.93 -0.42 -0.77 16 46 H 0.11 -0.01 6.93 -51.93 -0.36 -0.37 16 47 H 0.12 0.33 5.22 -51.93 -0.27 0.06 16 48 H 0.09 0.15 8.14 -51.93 -0.42 -0.28 16 49 H 0.13 -0.48 6.29 -52.49 -0.33 -0.81 16 50 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16 LS Contribution 411.22 15.07 6.20 6.20 Total: 0.00 -11.38 411.22 -10.03 -21.40 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -5.96 Total: -13.05 kcal Atomic # 6 Polarization: -0.42 SS G_CDS: -3.80 Total: -4.22 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -0.23 Total: 1.34 kcal Atomic # 8 Polarization: -4.72 SS G_CDS: -1.21 Total: -5.94 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 0.07 Total: -0.91 kcal Atomic # 14 Polarization: 0.26 SS G_CDS: -5.09 Total: -4.83 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -11.38 -10.03 -21.40 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.163 kcal (2) G-P(sol) polarization free energy of solvation -11.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.539 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.026 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.565 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds