Wall clock time and date at job start Sun Mar 7 2021 08:31:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35978 * 117.00136 * 2 1 4 4 C 1.38677 * 120.00317 * 180.27620 * 3 2 1 5 5 C 1.38154 * 120.00350 * 180.27853 * 4 3 2 6 6 C 1.50699 * 120.00237 * 179.72459 * 5 4 3 7 7 O 1.42895 * 109.47158 * 104.72228 * 6 5 4 8 8 Si 1.86300 * 109.46944 * 344.72748 * 6 5 4 9 9 C 1.38671 * 119.99786 * 359.45216 * 5 4 3 10 10 O 1.35980 * 120.00478 * 180.25927 * 9 5 4 11 11 C 1.42893 * 117.00399 * 179.97438 * 10 9 5 12 12 C 1.50705 * 109.46946 * 179.97438 * 11 10 9 13 13 O 1.21276 * 120.00239 * 359.97438 * 12 11 10 14 14 N 1.34780 * 119.99677 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99693 * 180.02562 * 14 12 11 16 16 C 1.50702 * 112.85077 * 311.19521 * 15 14 12 17 17 C 1.38439 * 120.01227 * 170.33631 * 16 15 14 18 18 F 1.35092 * 120.02780 * 359.97438 * 17 16 15 19 19 C 1.38484 * 119.94325 * 180.02562 * 17 16 15 20 20 C 1.38168 * 119.97814 * 359.97438 * 19 17 16 21 21 C 1.38269 * 120.02700 * 0.02562 * 20 19 17 22 22 C 1.38222 * 120.04998 * 359.72135 * 21 20 19 23 23 C 1.53787 * 113.61335 * 179.97438 * 15 14 12 24 24 C 1.53784 * 87.07912 * 270.88150 * 23 15 14 25 25 H 1.09004 * 113.61335 * 89.11677 * 24 23 15 26 26 F 1.39896 * 113.61191 * 219.93255 * 24 23 15 27 27 C 1.53776 * 113.61513 * 82.50069 * 15 14 12 28 28 C 1.38720 * 120.00231 * 0.27388 * 9 5 4 29 29 C 1.38117 * 119.99973 * 0.02562 * 28 9 5 30 30 H 1.08999 * 109.47543 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46973 * 299.99860 * 1 2 3 32 32 H 1.09004 * 109.47221 * 59.99654 * 1 2 3 33 33 H 1.08005 * 119.99991 * 0.02962 * 4 3 2 34 34 H 1.09000 * 109.47247 * 224.72681 * 6 5 4 35 35 H 0.96698 * 114.00355 * 300.00487 * 7 6 5 36 36 H 1.48506 * 110.00048 * 180.02562 * 8 6 5 37 37 H 1.48502 * 109.99996 * 301.31619 * 8 6 5 38 38 H 1.08996 * 109.47263 * 299.99213 * 11 10 9 39 39 H 1.09000 * 109.47636 * 60.00064 * 11 10 9 40 40 H 0.96993 * 120.00275 * 359.97438 * 14 12 11 41 41 H 1.08006 * 120.00786 * 179.97438 * 19 17 16 42 42 H 1.08004 * 119.99243 * 179.97438 * 20 19 17 43 43 H 1.08001 * 119.97709 * 179.97438 * 21 20 19 44 44 H 1.07997 * 119.98955 * 180.27646 * 22 21 20 45 45 H 1.08998 * 113.61504 * 25.43121 * 23 15 14 46 46 H 1.08997 * 113.61164 * 156.24779 * 23 15 14 47 47 H 1.09005 * 113.61719 * 203.66188 * 27 15 14 48 48 H 1.09000 * 113.61827 * 334.56828 * 27 15 14 49 49 H 1.08000 * 120.00266 * 179.97438 * 28 9 5 50 50 H 1.07992 * 120.00119 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 -0.0058 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5940 0.0000 7 8 6.0208 2.9671 -1.3013 8 14 6.2723 0.9321 0.4544 9 6 3.3033 3.6781 0.0002 10 8 3.9205 4.8897 0.0006 11 6 3.0806 6.0458 0.0001 12 6 3.9349 7.2873 0.0013 13 8 5.1439 7.1916 0.0029 14 7 3.3553 8.5041 0.0016 15 6 4.1857 9.7110 0.0022 16 6 5.2708 9.6743 1.0474 17 6 6.2625 10.6402 1.0502 18 9 6.2585 11.6159 0.1158 19 6 7.2592 10.6048 2.0109 20 6 7.2626 9.6061 2.9657 21 6 6.2716 8.6419 2.9619 22 6 5.2732 8.6791 2.0067 23 6 3.3740 11.0172 0.0019 24 6 3.3961 10.9384 -1.5337 25 1 2.5624 10.3759 -1.9541 26 9 3.5843 12.1772 -2.1558 27 6 4.6866 10.1148 -1.3945 28 6 1.9180 3.6056 0.0002 29 6 1.2909 2.3750 0.0007 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 4.0195 0.3784 -0.0108 34 1 5.8883 3.3386 0.7267 35 1 5.7675 2.3482 -1.9998 36 1 7.7559 0.9967 0.4586 37 1 5.7788 0.5181 1.7924 38 1 2.4520 6.0378 -0.8902 39 1 2.4508 6.0378 0.8897 40 1 2.3884 8.5807 0.0008 41 1 8.0336 11.3576 2.0138 42 1 8.0401 9.5780 3.7149 43 1 6.2752 7.8613 3.7083 44 1 4.4972 7.9281 2.0073 45 1 2.3773 10.9120 0.4302 46 1 3.9198 11.8705 0.4046 47 1 5.5919 10.7216 -1.3752 48 1 4.7496 9.2810 -2.0937 49 1 1.3298 4.5114 0.0007 50 1 0.2124 2.3185 0.0003 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:31:26 Heat of formation + Delta-G solvation = -118.076569 kcal Electronic energy + Delta-G solvation = -39471.403038 eV Core-core repulsion = 34069.375907 eV Total energy + Delta-G solvation = -5402.027131 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -50.21994 -48.63812 -42.15251 -41.58077 -40.19080 -39.44046 -38.88326 -38.11461 -36.88444 -34.46581 -32.79321 -32.32653 -31.45080 -30.98774 -29.38875 -27.94030 -27.23427 -26.61616 -26.06014 -24.02029 -23.64573 -22.87975 -22.41929 -21.95948 -20.83501 -19.60502 -18.89926 -18.68160 -18.57164 -18.00155 -17.74086 -17.47852 -17.20177 -17.14321 -17.12061 -16.92742 -16.77080 -16.60843 -16.16634 -15.94798 -15.91422 -15.85144 -15.60367 -15.38342 -15.14145 -14.93645 -14.60955 -14.44685 -14.29847 -14.12570 -14.06971 -13.84132 -13.50775 -13.47094 -13.45351 -13.10605 -12.98817 -12.89005 -12.78434 -12.48920 -12.34073 -12.20158 -12.09473 -11.81000 -11.62496 -11.47605 -11.40320 -11.06765 -10.45239 -10.40650 -10.09918 -9.88591 -9.68249 -8.78023 -5.04505 0.04882 0.08252 0.17400 0.37601 1.26644 1.32903 1.36717 1.61113 1.92785 2.35630 2.47283 2.50802 2.57803 3.04024 3.11982 3.15603 3.24289 3.38895 3.49899 3.52132 3.70096 3.73206 3.76456 3.77920 3.88823 3.98056 4.06311 4.07078 4.12164 4.15036 4.25709 4.27132 4.31660 4.40844 4.45795 4.47407 4.47635 4.53856 4.58531 4.70506 4.72691 4.77391 4.80867 4.91873 4.94993 4.99259 5.04248 5.16420 5.23708 5.23951 5.36184 5.39725 5.44956 5.82367 6.16731 6.36248 6.47948 6.79599 7.05824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.333 6.333 3 C 0.087 3.913 4 C -0.117 4.117 5 C -0.124 4.124 6 C -0.063 4.063 7 O -0.552 6.552 8 Si 0.776 3.224 9 C 0.100 3.900 10 O -0.308 6.308 11 C 0.036 3.964 12 C 0.510 3.490 13 O -0.540 6.540 14 N -0.690 5.690 15 C 0.203 3.797 16 C -0.115 4.115 17 C 0.083 3.917 18 F -0.139 7.139 19 C -0.163 4.163 20 C -0.092 4.092 21 C -0.140 4.140 22 C -0.064 4.064 23 C -0.143 4.143 24 C 0.073 3.927 25 H 0.144 0.856 26 F -0.220 7.220 27 C -0.185 4.185 28 C -0.164 4.164 29 C -0.160 4.160 30 H 0.113 0.887 31 H 0.065 0.935 32 H 0.067 0.933 33 H 0.155 0.845 34 H 0.091 0.909 35 H 0.391 0.609 36 H -0.298 1.298 37 H -0.284 1.284 38 H 0.124 0.876 39 H 0.126 0.874 40 H 0.429 0.571 41 H 0.149 0.851 42 H 0.155 0.845 43 H 0.142 0.858 44 H 0.127 0.873 45 H 0.126 0.874 46 H 0.099 0.901 47 H 0.102 0.898 48 H 0.077 0.923 49 H 0.165 0.835 50 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.938 -3.302 1.461 11.519 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.042 3.958 4 C -0.135 4.135 5 C -0.125 4.125 6 C -0.172 4.172 7 O -0.359 6.359 8 Si 0.681 3.319 9 C 0.055 3.945 10 O -0.222 6.222 11 C -0.042 4.042 12 C 0.297 3.703 13 O -0.415 6.415 14 N -0.347 5.347 15 C 0.115 3.885 16 C -0.116 4.116 17 C 0.064 3.936 18 F -0.118 7.118 19 C -0.182 4.182 20 C -0.110 4.110 21 C -0.158 4.158 22 C -0.083 4.083 23 C -0.180 4.180 24 C 0.037 3.963 25 H 0.161 0.839 26 F -0.200 7.200 27 C -0.224 4.224 28 C -0.183 4.183 29 C -0.178 4.178 30 H 0.132 0.868 31 H 0.083 0.917 32 H 0.086 0.914 33 H 0.172 0.828 34 H 0.108 0.892 35 H 0.240 0.760 36 H -0.226 1.226 37 H -0.210 1.210 38 H 0.142 0.858 39 H 0.144 0.856 40 H 0.269 0.731 41 H 0.167 0.833 42 H 0.173 0.827 43 H 0.160 0.840 44 H 0.145 0.855 45 H 0.144 0.856 46 H 0.117 0.883 47 H 0.120 0.880 48 H 0.096 0.904 49 H 0.183 0.817 50 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -9.081 -3.415 2.290 9.968 hybrid contribution -0.430 1.122 -0.067 1.204 sum -9.511 -2.293 2.222 10.032 Atomic orbital electron populations 1.23338 0.76489 1.05530 1.02318 1.86082 1.23280 1.26358 1.89002 1.18972 0.92046 0.85237 0.99513 1.20175 0.92314 0.96641 1.04336 1.19479 0.96172 0.90791 1.06054 1.25022 0.91963 1.11380 0.88882 1.86553 1.78340 1.54312 1.16715 0.94014 0.76494 0.78068 0.83308 1.18824 0.91502 0.84500 0.99720 1.86203 1.35042 1.11818 1.89108 1.22700 0.92535 0.82091 1.06870 1.20534 0.88747 0.85040 0.75992 1.90874 1.16200 1.86901 1.47535 1.45297 1.10866 1.02643 1.75895 1.19462 0.90445 0.85901 0.92709 1.19632 0.97210 0.96421 0.98377 1.17608 0.97742 0.88312 0.89974 1.91382 1.96332 1.60876 1.63203 1.21385 0.99106 1.01939 0.95786 1.21342 0.98717 0.92952 0.97957 1.21492 0.95000 0.99717 0.99576 1.20940 0.98890 0.95654 0.92779 1.23954 1.03074 0.95394 0.95624 1.23290 0.99372 0.80788 0.92810 0.83876 1.92798 1.96498 1.46040 1.84688 1.24395 1.00273 1.01049 0.96690 1.21376 0.92087 1.00008 1.04794 1.21411 1.01529 0.90985 1.03884 0.86847 0.91670 0.91405 0.82829 0.89179 0.75980 1.22562 1.21015 0.85795 0.85644 0.73138 0.83296 0.82696 0.84017 0.85509 0.85573 0.88254 0.87982 0.90447 0.81722 0.82321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.13 9.81 113.37 1.11 0.99 16 2 O -0.33 -0.07 10.50 -93.31 -0.98 -1.05 16 3 C 0.09 0.04 6.69 22.49 0.15 0.19 16 4 C -0.12 -0.15 8.59 22.35 0.19 0.05 16 5 C -0.12 -0.45 5.27 -19.78 -0.10 -0.55 16 6 C -0.06 -0.36 2.37 71.24 0.17 -0.19 16 7 O -0.55 -3.91 12.88 -148.98 -1.92 -5.83 16 8 Si 0.78 1.71 29.92 68.60 2.05 3.77 16 9 C 0.10 0.25 6.66 22.49 0.15 0.40 16 10 O -0.31 -1.51 9.00 -74.29 -0.67 -2.18 16 11 C 0.04 -0.18 5.22 71.24 0.37 0.19 16 12 C 0.51 0.35 5.84 87.66 0.51 0.86 16 13 O -0.54 -6.56 13.70 16.02 0.22 -6.34 16 14 N -0.69 3.81 4.85 -423.91 -2.06 1.76 16 15 C 0.20 0.05 1.07 3.38 0.00 0.06 16 16 C -0.11 -0.65 4.56 -19.82 -0.09 -0.74 16 17 C 0.08 0.62 6.71 22.38 0.15 0.77 16 18 F -0.14 -1.21 12.93 44.97 0.58 -0.63 16 19 C -0.16 -0.84 10.03 22.31 0.22 -0.61 16 20 C -0.09 -0.29 10.04 22.26 0.22 -0.07 16 21 C -0.14 -0.59 10.04 22.27 0.22 -0.36 16 22 C -0.06 -0.34 7.39 22.26 0.16 -0.18 16 23 C -0.14 0.47 6.94 31.12 0.22 0.69 16 24 C 0.07 -0.09 5.57 31.10 0.17 0.08 16 25 H 0.14 -1.16 8.14 -2.38 -0.02 -1.18 16 26 F -0.22 -1.35 17.41 44.97 0.78 -0.56 16 27 C -0.19 -0.67 6.98 31.10 0.22 -0.46 16 28 C -0.16 0.60 9.03 22.36 0.20 0.80 16 29 C -0.16 0.55 9.03 22.36 0.20 0.76 16 30 H 0.11 -1.09 8.14 -2.39 -0.02 -1.11 16 31 H 0.06 -0.59 7.66 -2.39 -0.02 -0.61 16 32 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 33 H 0.15 -0.33 5.14 -2.91 -0.01 -0.35 16 34 H 0.09 0.93 7.82 -2.39 -0.02 0.91 16 35 H 0.39 -0.87 8.70 -74.06 -0.64 -1.51 16 36 H -0.30 -2.83 7.11 99.48 0.71 -2.12 16 37 H -0.28 -1.87 7.11 99.48 0.71 -1.16 16 38 H 0.12 -1.38 7.66 -2.39 -0.02 -1.40 16 39 H 0.13 -1.50 7.66 -2.39 -0.02 -1.52 16 40 H 0.43 -6.26 8.63 -92.71 -0.80 -7.06 16 41 H 0.15 0.24 8.06 -2.91 -0.02 0.22 16 42 H 0.16 -0.33 8.06 -2.91 -0.02 -0.35 16 43 H 0.14 0.07 8.06 -2.91 -0.02 0.05 16 44 H 0.13 0.41 5.58 -2.91 -0.02 0.39 16 45 H 0.13 -1.29 8.12 -2.39 -0.02 -1.31 16 46 H 0.10 0.04 6.93 -2.39 -0.02 0.02 16 47 H 0.10 0.83 5.22 -2.38 -0.01 0.82 16 48 H 0.08 0.39 8.14 -2.39 -0.02 0.37 16 49 H 0.17 -1.83 6.29 -2.91 -0.02 -1.85 16 50 H 0.16 -1.42 6.29 -2.91 -0.02 -1.44 16 Total: 0.00 -31.35 411.22 2.11 -29.24 By element: Atomic # 1 Polarization: -20.47 SS G_CDS: -0.37 Total: -20.84 kcal Atomic # 6 Polarization: -1.79 SS G_CDS: 4.46 Total: 2.67 kcal Atomic # 7 Polarization: 3.81 SS G_CDS: -2.06 Total: 1.76 kcal Atomic # 8 Polarization: -12.06 SS G_CDS: -3.35 Total: -15.41 kcal Atomic # 9 Polarization: -2.56 SS G_CDS: 1.36 Total: -1.19 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.05 Total: 3.77 kcal Total: -31.35 2.11 -29.24 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.838 kcal (2) G-P(sol) polarization free energy of solvation -31.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.187 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.077 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds