Wall clock time and date at job start Sun Mar 7 2021 08:31:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35895 * 117.00236 * 2 1 4 4 C 1.38611 * 120.03066 * 179.97438 * 3 2 1 5 5 C 1.38654 * 119.89125 * 180.02562 * 4 3 2 6 6 O 1.35901 * 120.02432 * 180.02562 * 5 4 3 7 7 C 1.42897 * 117.00270 * 359.97438 * 6 5 4 8 8 C 1.50702 * 109.47123 * 180.02562 * 7 6 5 9 9 O 1.21282 * 120.00102 * 359.97438 * 8 7 6 10 10 N 1.34775 * 119.99862 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99697 * 179.97438 * 10 8 7 12 12 C 1.50696 * 112.85084 * 311.19308 * 11 10 8 13 13 C 1.38440 * 120.01391 * 170.05757 * 12 11 10 14 14 F 1.35102 * 120.02402 * 0.02562 * 13 12 11 15 15 C 1.38484 * 119.94949 * 179.72695 * 13 12 11 16 16 C 1.38178 * 119.97282 * 0.57253 * 15 13 12 17 17 C 1.38265 * 120.02457 * 359.70451 * 16 15 13 18 18 C 1.38219 * 120.01324 * 350.33651 * 12 11 10 19 19 C 1.53784 * 113.61213 * 180.02562 * 11 10 8 20 20 C 1.53780 * 87.08123 * 270.88001 * 19 11 10 21 21 H 1.09011 * 113.60998 * 89.11702 * 20 19 11 22 22 F 1.39898 * 113.61791 * 220.01507 * 20 19 11 23 23 C 1.53779 * 87.08270 * 334.57020 * 20 19 11 24 24 C 1.38750 * 119.94554 * 0.02562 * 5 4 3 25 25 C 1.50705 * 119.97197 * 179.97438 * 24 5 4 26 26 O 1.42894 * 109.47171 * 285.00363 * 25 24 5 27 27 Si 1.86298 * 109.46780 * 164.99803 * 25 24 5 28 28 C 1.38191 * 120.05476 * 0.27295 * 24 5 4 29 29 C 1.38163 * 120.11105 * 359.45155 * 28 24 5 30 30 H 1.09000 * 109.47183 * 60.00112 * 1 2 3 31 31 H 1.09006 * 109.46838 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.47224 * 299.99594 * 1 2 3 33 33 H 1.08004 * 120.05504 * 0.02562 * 4 3 2 34 34 H 1.09000 * 109.47097 * 300.00259 * 7 6 5 35 35 H 1.08999 * 109.46716 * 60.00242 * 7 6 5 36 36 H 0.97000 * 120.00364 * 0.02562 * 10 8 7 37 37 H 1.07997 * 120.01391 * 180.29294 * 15 13 12 38 38 H 1.07994 * 119.98685 * 179.72313 * 16 15 13 39 39 H 1.08001 * 119.97320 * 180.02562 * 17 16 15 40 40 H 1.08002 * 119.99067 * 359.95563 * 18 12 11 41 41 H 1.09004 * 113.61495 * 25.43561 * 19 11 10 42 42 H 1.09001 * 113.61174 * 156.24916 * 19 11 10 43 43 H 1.09003 * 113.61241 * 270.88508 * 23 20 19 44 44 H 1.08997 * 113.61763 * 139.97996 * 23 20 19 45 45 H 1.09004 * 109.46779 * 45.00686 * 25 24 5 46 46 H 0.96709 * 113.99337 * 180.02562 * 26 25 24 47 47 H 1.48506 * 109.99834 * 60.00830 * 27 25 24 48 48 H 1.48502 * 110.00011 * 181.32094 * 27 25 24 49 49 H 1.07998 * 119.94710 * 179.72583 * 28 24 5 50 50 H 1.07992 * 119.97629 * 180.25168 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2840 0.0005 5 6 4.0567 2.5210 0.0011 6 8 5.4136 2.5959 0.0011 7 6 6.1317 1.3604 0.0011 8 6 7.6125 1.6400 0.0017 9 8 8.0135 2.7846 0.0017 10 7 8.4912 0.6181 0.0013 11 6 9.9308 0.8900 0.0014 12 6 10.3361 1.8977 -1.0433 13 6 11.6186 2.4188 -1.0420 14 9 12.5078 2.0239 -0.1046 15 6 11.9914 3.3405 -2.0060 16 6 11.0794 3.7479 -2.9608 17 6 9.7970 3.2311 -2.9576 18 6 9.4256 2.3064 -1.9996 19 6 10.7975 -0.3803 0.0002 20 6 10.7341 -0.3302 1.5359 21 1 9.8825 -0.8661 1.9554 22 9 11.9437 -0.6578 2.1578 23 6 10.5022 1.1838 1.3985 24 6 3.2971 3.6821 0.0016 25 6 3.9775 5.0268 0.0028 26 8 4.5032 5.2935 1.3044 27 14 2.7440 6.3471 -0.4514 28 6 1.9173 3.6065 0.0073 29 6 1.2906 2.3752 0.0010 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 4.0197 0.3791 0.0005 34 1 5.8699 0.7881 0.8910 35 1 5.8700 0.7882 -0.8889 36 1 8.1705 -0.2973 0.0002 37 1 12.9931 3.7441 -2.0088 38 1 11.3685 4.4700 -3.7099 39 1 9.0850 3.5497 -3.7045 40 1 8.4238 1.9029 -1.9986 41 1 10.2986 -1.2490 -0.4294 42 1 11.7987 -0.2254 -0.4020 43 1 11.4231 1.7667 1.3798 44 1 9.7648 1.5779 2.0978 45 1 4.7901 5.0234 -0.7237 46 1 4.9557 6.1449 1.3789 47 1 1.6309 6.3620 0.5315 48 1 3.4097 7.6741 -0.4849 49 1 1.3278 4.5113 0.0122 50 1 0.2121 2.3187 0.0014 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:31:30 Heat of formation + Delta-G solvation = -115.801312 kcal Electronic energy + Delta-G solvation = -39565.973133 eV Core-core repulsion = 34164.044665 eV Total energy + Delta-G solvation = -5401.928469 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -50.19621 -48.64009 -42.16555 -41.60001 -40.21236 -39.43708 -38.87885 -38.17245 -37.08502 -34.46339 -32.41677 -32.28819 -31.41316 -31.39014 -29.47062 -28.35633 -27.23202 -26.08004 -26.04568 -24.03935 -23.63607 -22.86581 -22.38581 -21.95624 -20.82777 -19.87674 -18.84539 -18.59461 -18.54912 -18.01779 -17.73227 -17.48029 -17.35088 -17.12964 -17.11710 -16.88097 -16.86427 -16.68526 -16.64038 -16.00311 -15.90686 -15.70566 -15.60150 -15.45564 -15.21656 -14.91570 -14.69781 -14.42832 -14.13450 -14.00483 -13.82598 -13.78242 -13.59143 -13.48048 -13.35905 -13.20186 -13.08055 -12.85457 -12.76692 -12.50194 -12.42282 -12.16852 -11.98633 -11.75879 -11.62142 -11.60246 -11.46950 -11.08329 -10.45061 -10.40868 -9.85176 -9.69883 -9.64954 -9.10204 -4.95156 0.08553 0.19446 0.21242 0.30607 1.27715 1.30353 1.35083 1.58122 1.91187 2.22394 2.46867 2.51269 2.53816 3.04574 3.12606 3.18437 3.25396 3.39193 3.47198 3.52217 3.71746 3.73013 3.78217 3.87031 3.92403 3.98952 4.03809 4.06099 4.10324 4.19323 4.29712 4.30888 4.34967 4.37872 4.42829 4.46437 4.47950 4.54429 4.58815 4.61644 4.72700 4.79536 4.80514 4.93625 4.99081 5.00437 5.06644 5.23082 5.27312 5.30122 5.38575 5.42650 5.45853 5.86327 6.09964 6.31756 6.38277 6.58771 7.03381 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.164 3.836 4 C -0.250 4.250 5 C 0.179 3.821 6 O -0.299 6.299 7 C 0.033 3.967 8 C 0.514 3.486 9 O -0.537 6.537 10 N -0.691 5.691 11 C 0.203 3.797 12 C -0.116 4.116 13 C 0.082 3.918 14 F -0.141 7.141 15 C -0.164 4.164 16 C -0.091 4.091 17 C -0.137 4.137 18 C -0.064 4.064 19 C -0.142 4.142 20 C 0.071 3.929 21 H 0.142 0.858 22 F -0.220 7.220 23 C -0.185 4.185 24 C -0.160 4.160 25 C -0.077 4.077 26 O -0.557 6.557 27 Si 0.774 3.226 28 C -0.043 4.043 29 C -0.239 4.239 30 H 0.071 0.929 31 H 0.117 0.883 32 H 0.064 0.936 33 H 0.158 0.842 34 H 0.119 0.881 35 H 0.130 0.870 36 H 0.428 0.572 37 H 0.148 0.852 38 H 0.156 0.844 39 H 0.146 0.854 40 H 0.128 0.872 41 H 0.125 0.875 42 H 0.100 0.900 43 H 0.104 0.896 44 H 0.076 0.924 45 H 0.070 0.930 46 H 0.387 0.613 47 H -0.283 1.283 48 H -0.291 1.291 49 H 0.149 0.851 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.441 -4.965 -6.004 10.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.269 4.269 5 C 0.133 3.867 6 O -0.211 6.211 7 C -0.044 4.044 8 C 0.301 3.699 9 O -0.412 6.412 10 N -0.347 5.347 11 C 0.116 3.884 12 C -0.118 4.118 13 C 0.063 3.937 14 F -0.119 7.119 15 C -0.183 4.183 16 C -0.108 4.108 17 C -0.155 4.155 18 C -0.082 4.082 19 C -0.180 4.180 20 C 0.036 3.964 21 H 0.159 0.841 22 F -0.200 7.200 23 C -0.224 4.224 24 C -0.161 4.161 25 C -0.184 4.184 26 O -0.366 6.366 27 Si 0.678 3.322 28 C -0.061 4.061 29 C -0.257 4.257 30 H 0.090 0.910 31 H 0.136 0.864 32 H 0.083 0.917 33 H 0.176 0.824 34 H 0.136 0.864 35 H 0.147 0.853 36 H 0.268 0.732 37 H 0.166 0.834 38 H 0.174 0.826 39 H 0.164 0.836 40 H 0.146 0.854 41 H 0.144 0.856 42 H 0.119 0.881 43 H 0.122 0.878 44 H 0.094 0.906 45 H 0.088 0.912 46 H 0.236 0.764 47 H -0.210 1.210 48 H -0.219 1.219 49 H 0.166 0.834 50 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -6.557 -4.075 -5.582 9.527 hybrid contribution 1.042 0.162 1.400 1.753 sum -5.514 -3.913 -4.182 7.950 Atomic orbital electron populations 1.23401 0.76071 1.05716 1.02629 1.86050 1.23682 1.26427 1.87926 1.18862 0.91773 0.84861 0.92696 1.20557 0.93297 0.97446 1.15587 1.18494 0.81799 0.92974 0.93447 1.86186 1.15224 1.31511 1.88162 1.22746 0.88115 0.86626 1.06955 1.20382 0.88227 0.85307 0.76031 1.90854 1.80170 1.22619 1.47583 1.45303 1.03283 1.10320 1.75810 1.19458 0.81121 0.95088 0.92765 1.19612 0.92753 1.00917 0.98477 1.17624 0.87178 0.99010 0.89905 1.91379 1.67735 1.89769 1.63048 1.21384 1.02452 0.98681 0.95770 1.21357 0.92699 0.98915 0.97876 1.21512 0.97190 0.97360 0.99427 1.20960 0.98240 0.96261 0.92754 1.23951 1.01389 0.97198 0.95486 1.23308 0.84399 0.95811 0.92927 0.84105 1.92797 1.48704 1.93816 1.84711 1.24417 1.03443 0.97831 0.96722 1.18723 0.93042 0.92390 1.11921 1.24914 1.04619 1.01611 0.87299 1.86563 1.76375 1.42733 1.30922 0.94250 0.76655 0.73830 0.87436 1.20892 0.92209 0.98734 0.94248 1.21373 1.01622 0.91209 1.11522 0.91042 0.86449 0.91722 0.82418 0.86367 0.85282 0.73196 0.83410 0.82592 0.83624 0.85448 0.85647 0.88145 0.87802 0.90562 0.91168 0.76378 1.20994 1.21887 0.83381 0.82595 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.14 10.49 -92.37 -0.97 -1.11 16 3 C 0.16 0.29 6.68 22.49 0.15 0.44 16 4 C -0.25 -0.35 8.97 22.46 0.20 -0.15 16 5 C 0.18 0.88 6.66 22.49 0.15 1.03 16 6 O -0.30 -1.71 8.99 -73.40 -0.66 -2.37 16 7 C 0.03 -0.11 5.22 71.24 0.37 0.26 16 8 C 0.51 0.44 5.84 87.66 0.51 0.95 16 9 O -0.54 -5.91 13.69 16.00 0.22 -5.70 16 10 N -0.69 3.48 4.85 -423.92 -2.06 1.42 16 11 C 0.20 0.05 1.07 3.38 0.00 0.06 16 12 C -0.12 -0.57 4.57 -19.82 -0.09 -0.66 16 13 C 0.08 0.55 6.72 22.38 0.15 0.70 16 14 F -0.14 -1.16 12.94 44.97 0.58 -0.58 16 15 C -0.16 -0.67 10.03 22.31 0.22 -0.45 16 16 C -0.09 -0.15 10.04 22.26 0.22 0.08 16 17 C -0.14 -0.33 10.04 22.27 0.22 -0.11 16 18 C -0.06 -0.26 7.38 22.26 0.16 -0.10 16 19 C -0.14 0.43 6.94 31.12 0.22 0.65 16 20 C 0.07 -0.05 5.58 31.12 0.17 0.12 16 21 H 0.14 -1.00 8.14 -2.38 -0.02 -1.02 16 22 F -0.22 -1.45 17.41 44.97 0.78 -0.67 16 23 C -0.19 -0.70 6.98 31.12 0.22 -0.48 16 24 C -0.16 -0.88 5.30 -19.75 -0.10 -0.98 16 25 C -0.08 -0.40 2.36 71.24 0.17 -0.23 16 26 O -0.56 -5.05 12.86 -148.98 -1.92 -6.97 16 27 Si 0.77 0.38 30.21 68.60 2.07 2.45 16 28 C -0.04 -0.09 8.65 22.24 0.19 0.11 16 29 C -0.24 -0.05 9.04 22.39 0.20 0.16 16 30 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 31 H 0.12 -1.11 8.14 -2.38 -0.02 -1.13 16 32 H 0.06 -0.48 7.66 -2.39 -0.02 -0.50 16 33 H 0.16 -0.63 6.30 -2.91 -0.02 -0.65 16 34 H 0.12 -0.93 7.66 -2.39 -0.02 -0.95 16 35 H 0.13 -1.31 7.66 -2.39 -0.02 -1.33 16 36 H 0.43 -5.79 8.63 -92.71 -0.80 -6.59 16 37 H 0.15 0.11 8.06 -2.91 -0.02 0.09 16 38 H 0.16 -0.58 8.06 -2.91 -0.02 -0.61 16 39 H 0.15 -0.26 8.06 -2.91 -0.02 -0.28 16 40 H 0.13 0.27 5.56 -2.91 -0.02 0.26 16 41 H 0.13 -1.22 8.12 -2.39 -0.02 -1.24 16 42 H 0.10 0.04 6.95 -2.39 -0.02 0.03 16 43 H 0.10 0.83 5.20 -2.39 -0.01 0.82 16 44 H 0.08 0.40 8.14 -2.39 -0.02 0.38 16 45 H 0.07 0.37 7.82 -2.38 -0.02 0.36 16 46 H 0.39 0.83 8.74 -74.05 -0.65 0.18 16 47 H -0.28 -1.37 6.74 99.48 0.67 -0.70 16 48 H -0.29 -1.53 7.11 99.48 0.71 -0.83 16 49 H 0.15 -0.17 4.89 -2.91 -0.01 -0.18 16 50 H 0.16 -0.78 6.29 -2.91 -0.02 -0.79 16 Total: 0.00 -28.54 410.91 2.11 -26.43 By element: Atomic # 1 Polarization: -14.90 SS G_CDS: -0.41 Total: -15.30 kcal Atomic # 6 Polarization: -2.07 SS G_CDS: 4.46 Total: 2.39 kcal Atomic # 7 Polarization: 3.48 SS G_CDS: -2.06 Total: 1.42 kcal Atomic # 8 Polarization: -12.81 SS G_CDS: -3.33 Total: -16.14 kcal Atomic # 9 Polarization: -2.62 SS G_CDS: 1.36 Total: -1.25 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.07 Total: 2.45 kcal Total: -28.54 2.11 -26.43 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.373 kcal (2) G-P(sol) polarization free energy of solvation -28.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.428 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds