Wall clock time and date at job start Sun Mar 7 2021 08:31:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38238 * 119.94258 * 119.72187 * 4 2 1 6 6 C 1.38236 * 120.04671 * 179.76852 * 5 4 2 7 7 Br 1.89097 * 120.03779 * 180.27889 * 6 5 4 8 8 C 1.38796 * 119.92599 * 0.51316 * 6 5 4 9 9 O 1.35918 * 120.05958 * 179.76508 * 8 6 5 10 10 C 1.42895 * 117.00285 * 179.97438 * 9 8 6 11 11 C 1.50693 * 109.47532 * 180.02562 * 10 9 8 12 12 O 1.21279 * 119.99866 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00337 * 180.02562 * 11 10 9 14 14 C 1.46494 * 120.00500 * 180.02562 * 13 11 10 15 15 C 1.50703 * 112.84990 * 48.80095 * 14 13 11 16 16 C 1.38434 * 120.01506 * 189.67121 * 15 14 13 17 17 F 1.35095 * 120.02546 * 359.97438 * 16 15 14 18 18 C 1.38480 * 119.95194 * 180.02562 * 16 15 14 19 19 C 1.38186 * 119.97056 * 359.97438 * 18 16 15 20 20 C 1.38261 * 120.02532 * 0.02562 * 19 18 16 21 21 C 1.38222 * 120.01147 * 9.39519 * 15 14 13 22 22 C 1.53788 * 113.61639 * 277.49924 * 14 13 11 23 23 C 1.53778 * 87.07965 * 270.88125 * 22 14 13 24 24 H 1.09000 * 113.61498 * 89.10910 * 23 22 14 25 25 F 1.39902 * 113.61379 * 220.01595 * 23 22 14 26 26 C 1.53778 * 113.61862 * 179.97438 * 14 13 11 27 27 C 1.38718 * 119.88182 * 359.74330 * 8 6 5 28 28 C 1.38147 * 119.95523 * 359.97438 * 27 8 6 29 29 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 30 30 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 31 31 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 32 32 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 33 33 H 1.08005 * 119.97878 * 0.02562 * 5 4 2 34 34 H 1.09002 * 109.46984 * 300.00665 * 10 9 8 35 35 H 1.09004 * 109.46648 * 59.99565 * 10 9 8 36 36 H 0.97004 * 119.99650 * 359.97438 * 13 11 10 37 37 H 1.07995 * 120.01997 * 179.97438 * 18 16 15 38 38 H 1.07998 * 119.98149 * 179.97438 * 19 18 16 39 39 H 1.08002 * 119.97520 * 179.97438 * 20 19 18 40 40 H 1.08003 * 119.98547 * 0.02562 * 21 15 14 41 41 H 1.09004 * 113.60875 * 25.42948 * 22 14 13 42 42 H 1.08994 * 113.61660 * 156.32948 * 22 14 13 43 43 H 1.09006 * 113.61437 * 203.66404 * 26 14 13 44 44 H 1.08993 * 113.61549 * 334.56669 * 26 14 13 45 45 H 1.08001 * 120.02298 * 180.02562 * 27 8 6 46 46 H 1.07999 * 119.96359 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7212 -0.0358 -2.1426 6 6 3.1872 -0.6867 -3.2696 7 35 4.2742 0.2341 -4.5130 8 6 2.8522 -2.0155 -3.4899 9 8 3.3049 -2.6567 -4.5995 10 6 2.9210 -4.0237 -4.7609 11 6 3.5121 -4.5642 -6.0373 12 8 4.1953 -3.8493 -6.7395 13 7 3.2816 -5.8420 -6.3986 14 6 3.8567 -6.3676 -7.6392 15 6 5.3272 -6.0675 -7.7758 16 6 5.9764 -6.3160 -8.9729 17 9 5.2924 -6.8283 -10.0192 18 6 7.3278 -6.0402 -9.0967 19 6 8.0266 -5.5168 -8.0256 20 6 7.3770 -5.2689 -6.8305 21 6 6.0269 -5.5385 -6.7075 22 6 3.0365 -6.0220 -8.8934 23 6 2.2533 -7.3215 -8.6432 24 1 1.3870 -7.1912 -7.9945 25 9 1.9567 -8.0309 -9.8120 26 6 3.5013 -7.8395 -7.9078 27 6 2.0549 -2.6880 -2.5754 28 6 1.5968 -2.0345 -1.4478 29 1 -0.3932 0.4418 0.7651 30 1 1.7924 -0.5139 0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5881 2.4585 1.2242 33 1 2.9780 0.9994 -1.9724 34 1 3.2878 -4.6062 -3.9158 35 1 1.8341 -4.0929 -4.8054 36 1 2.7354 -6.4138 -5.8368 37 1 7.8355 -6.2341 -10.0300 38 1 9.0806 -5.3020 -8.1219 39 1 7.9240 -4.8602 -5.9937 40 1 5.5197 -5.3407 -5.7748 41 1 2.4329 -5.1207 -8.7856 42 1 3.6201 -6.0342 -9.8138 43 1 4.2121 -8.3484 -8.5590 44 1 3.2730 -8.4053 -7.0047 45 1 1.7932 -3.7222 -2.7444 46 1 0.9758 -2.5579 -0.7359 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:31:42 Heat of formation + Delta-G solvation = -75.403336 kcal Electronic energy + Delta-G solvation = -36534.360039 eV Core-core repulsion = 31268.585166 eV Total energy + Delta-G solvation = -5265.774873 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.042 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -50.18321 -48.61762 -42.12850 -41.36966 -39.77342 -39.10171 -38.63799 -37.38416 -34.44179 -33.50441 -32.35450 -32.14073 -31.39976 -30.47044 -29.50607 -27.20840 -26.45672 -25.92414 -24.17216 -23.70045 -22.93303 -22.34334 -21.87935 -20.80267 -19.52433 -18.81368 -18.66219 -18.41934 -17.96769 -17.48337 -17.24628 -17.10488 -17.04829 -16.99517 -16.83010 -16.61920 -16.07725 -15.99542 -15.83203 -15.70661 -15.46555 -15.00730 -14.91244 -14.51386 -14.45456 -14.22910 -14.12250 -13.97142 -13.87438 -13.78586 -13.66248 -13.46209 -13.07124 -12.84215 -12.74872 -12.53318 -12.29344 -12.20335 -12.08429 -11.92262 -11.77623 -11.59515 -11.44841 -11.20046 -11.04969 -10.51028 -10.41854 -9.98331 -9.83643 -9.63749 -9.28657 -4.96391 -0.01525 0.09384 0.09696 0.22463 0.64187 1.27031 1.27156 1.39442 1.54818 1.92391 2.36774 2.40140 2.52436 3.06815 3.14805 3.19748 3.27218 3.31110 3.39955 3.53069 3.69457 3.74204 3.77922 3.80113 3.83149 3.97998 4.05859 4.07707 4.08864 4.11829 4.30865 4.34857 4.36186 4.41243 4.50346 4.56559 4.61542 4.66695 4.75203 4.81003 4.81969 4.95765 5.00104 5.04753 5.08056 5.28530 5.32481 5.40330 5.44083 5.47006 5.87367 6.05439 6.37375 6.59548 7.08328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.064 4.064 3 Si 0.729 3.271 4 C -0.114 4.114 5 C -0.058 4.058 6 C -0.140 4.140 7 Br -0.048 7.048 8 C 0.152 3.848 9 O -0.301 6.301 10 C 0.032 3.968 11 C 0.511 3.489 12 O -0.537 6.537 13 N -0.690 5.690 14 C 0.204 3.796 15 C -0.115 4.115 16 C 0.082 3.918 17 F -0.141 7.141 18 C -0.165 4.165 19 C -0.092 4.092 20 C -0.138 4.138 21 C -0.062 4.062 22 C -0.185 4.185 23 C 0.071 3.929 24 H 0.144 0.856 25 F -0.221 7.221 26 C -0.143 4.143 27 C -0.194 4.194 28 C -0.035 4.035 29 H 0.397 0.603 30 H 0.109 0.891 31 H -0.304 1.304 32 H -0.280 1.280 33 H 0.143 0.857 34 H 0.136 0.864 35 H 0.129 0.871 36 H 0.429 0.571 37 H 0.147 0.853 38 H 0.155 0.845 39 H 0.144 0.856 40 H 0.130 0.870 41 H 0.077 0.923 42 H 0.101 0.899 43 H 0.098 0.902 44 H 0.126 0.874 45 H 0.177 0.823 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.743 -5.402 9.921 11.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.175 4.175 3 Si 0.636 3.364 4 C -0.115 4.115 5 C -0.077 4.077 6 C -0.220 4.220 7 Br 0.037 6.963 8 C 0.104 3.896 9 O -0.213 6.213 10 C -0.045 4.045 11 C 0.297 3.703 12 O -0.412 6.412 13 N -0.347 5.347 14 C 0.116 3.884 15 C -0.117 4.117 16 C 0.062 3.938 17 F -0.119 7.119 18 C -0.184 4.184 19 C -0.110 4.110 20 C -0.156 4.156 21 C -0.081 4.081 22 C -0.224 4.224 23 C 0.036 3.964 24 H 0.161 0.839 25 F -0.201 7.201 26 C -0.181 4.181 27 C -0.213 4.213 28 C -0.053 4.053 29 H 0.248 0.752 30 H 0.127 0.873 31 H -0.232 1.232 32 H -0.206 1.206 33 H 0.160 0.840 34 H 0.153 0.847 35 H 0.147 0.853 36 H 0.269 0.731 37 H 0.165 0.835 38 H 0.172 0.828 39 H 0.162 0.838 40 H 0.148 0.852 41 H 0.096 0.904 42 H 0.120 0.880 43 H 0.117 0.883 44 H 0.145 0.855 45 H 0.194 0.806 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 0.119 -3.973 8.191 9.105 hybrid contribution -1.671 -0.152 0.223 1.693 sum -1.552 -4.125 8.414 9.498 Atomic orbital electron populations 1.86528 1.18141 1.80472 1.51330 1.24631 0.84190 1.10153 0.98494 0.94476 0.91074 0.74121 0.76764 1.19340 1.00283 0.95300 0.96614 1.20853 0.96094 0.99569 0.91227 1.21078 1.07792 0.94125 0.98999 1.96769 1.66254 1.75453 1.57827 1.18729 0.93578 0.90491 0.86828 1.86236 1.70154 1.25551 1.39349 1.22838 1.03000 0.81622 0.97050 1.20458 0.80550 0.82059 0.87235 1.90886 1.37949 1.58149 1.54232 1.45285 1.53871 1.11885 1.23627 1.19438 0.88133 0.95546 0.85238 1.19618 0.95249 1.03402 0.93403 1.17624 0.91095 1.00943 0.84096 1.91381 1.79268 1.84752 1.56539 1.21376 0.92363 1.02809 1.01829 1.21346 1.01366 0.96403 0.91841 1.21505 0.94708 1.00412 0.98977 1.20965 0.94101 0.94932 0.98054 1.24406 0.99352 0.98918 0.99747 1.23339 0.98628 0.90663 0.83809 0.83892 1.92798 1.95073 1.80246 1.52010 1.23962 0.97127 0.93793 1.03180 1.21618 1.01606 1.02715 0.95332 1.21226 0.94863 0.93002 0.96195 0.75221 0.87322 1.23183 1.20609 0.84009 0.84668 0.85342 0.73077 0.83511 0.82769 0.83812 0.85233 0.90392 0.88047 0.88341 0.85535 0.80590 0.82561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.86 12.74 -148.98 -1.90 -1.04 16 2 C -0.06 0.24 2.81 71.24 0.20 0.44 16 3 Si 0.73 -1.42 29.78 68.60 2.04 0.63 16 4 C -0.11 0.10 5.42 -19.85 -0.11 -0.01 16 5 C -0.06 -0.12 8.40 22.27 0.19 0.07 16 6 C -0.14 -0.65 6.24 22.40 0.14 -0.51 16 7 Br -0.05 -0.38 33.16 -20.37 -0.68 -1.06 16 8 C 0.15 0.18 6.68 22.52 0.15 0.33 16 9 O -0.30 -0.67 9.00 -73.59 -0.66 -1.33 16 10 C 0.03 -0.25 5.22 71.23 0.37 0.12 16 11 C 0.51 -0.88 5.83 87.66 0.51 -0.37 16 12 O -0.54 -5.08 13.67 16.01 0.22 -4.86 16 13 N -0.69 5.07 4.86 -423.94 -2.06 3.01 16 14 C 0.20 -0.22 1.07 3.39 0.00 -0.22 16 15 C -0.11 -0.48 4.58 -19.82 -0.09 -0.57 16 16 C 0.08 0.53 6.71 22.37 0.15 0.68 16 17 F -0.14 -1.12 12.93 44.97 0.58 -0.54 16 18 C -0.17 -0.69 10.03 22.32 0.22 -0.47 16 19 C -0.09 -0.18 10.04 22.26 0.22 0.05 16 20 C -0.14 -0.35 10.04 22.27 0.22 -0.13 16 21 C -0.06 -0.22 7.38 22.26 0.16 -0.06 16 22 C -0.19 -0.48 6.98 31.12 0.22 -0.26 16 23 C 0.07 -0.14 5.58 31.14 0.17 0.03 16 24 H 0.14 -1.26 8.14 -2.39 -0.02 -1.28 16 25 F -0.22 -1.26 17.41 44.97 0.78 -0.48 16 26 C -0.14 0.60 6.94 31.14 0.22 0.82 16 27 C -0.19 1.02 9.04 22.36 0.20 1.22 16 28 C -0.03 0.14 9.60 22.26 0.21 0.35 16 29 H 0.40 -3.61 8.74 -74.05 -0.65 -4.25 16 30 H 0.11 -0.98 7.96 -2.38 -0.02 -1.00 16 31 H -0.30 -2.07 7.11 99.48 0.71 -1.37 16 32 H -0.28 -0.46 7.11 99.48 0.71 0.25 16 33 H 0.14 0.09 4.87 -2.91 -0.01 0.08 16 34 H 0.14 -2.06 7.66 -2.39 -0.02 -2.08 16 35 H 0.13 -1.77 7.66 -2.38 -0.02 -1.79 16 36 H 0.43 -7.02 8.63 -92.71 -0.80 -7.82 16 37 H 0.15 0.15 8.06 -2.91 -0.02 0.12 16 38 H 0.15 -0.49 8.06 -2.91 -0.02 -0.51 16 39 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 40 H 0.13 0.13 5.53 -2.91 -0.02 0.12 16 41 H 0.08 0.30 8.14 -2.38 -0.02 0.28 16 42 H 0.10 0.74 5.23 -2.39 -0.01 0.73 16 43 H 0.10 -0.03 6.93 -2.38 -0.02 -0.05 16 44 H 0.13 -1.41 8.12 -2.39 -0.02 -1.43 16 45 H 0.18 -2.39 6.30 -2.91 -0.02 -2.41 16 46 H 0.16 -1.27 8.06 -2.91 -0.02 -1.29 16 Total: 0.00 -29.48 402.52 1.39 -28.09 By element: Atomic # 1 Polarization: -23.61 SS G_CDS: -0.32 Total: -23.92 kcal Atomic # 6 Polarization: -1.87 SS G_CDS: 3.37 Total: 1.50 kcal Atomic # 7 Polarization: 5.07 SS G_CDS: -2.06 Total: 3.01 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -2.34 Total: -7.22 kcal Atomic # 9 Polarization: -2.38 SS G_CDS: 1.36 Total: -1.02 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: 2.04 Total: 0.63 kcal Atomic # 35 Polarization: -0.38 SS G_CDS: -0.68 Total: -1.06 kcal Total: -29.48 1.39 -28.09 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.314 kcal (2) G-P(sol) polarization free energy of solvation -29.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.387 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.089 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds