Wall clock time and date at job start Sun Mar 7 2021 11:55:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46927 * 2 1 4 4 C 1.50703 * 109.47171 * 119.99815 * 2 1 3 5 5 C 1.35087 * 126.07571 * 254.69240 * 4 2 1 6 6 N 1.35035 * 107.98236 * 179.83661 * 5 4 2 7 7 C 1.46489 * 125.93435 * 180.14188 * 6 5 4 8 8 C 1.50700 * 109.47418 * 125.30688 * 7 6 5 9 9 O 1.21287 * 119.99796 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00485 * 179.97438 * 8 7 6 11 11 C 1.46502 * 120.00185 * 180.02562 * 10 8 7 12 12 C 1.50704 * 112.84777 * 311.19458 * 11 10 8 13 13 C 1.38431 * 120.00994 * 170.33228 * 12 11 10 14 14 F 1.35100 * 120.02796 * 359.97438 * 13 12 11 15 15 C 1.38480 * 119.94940 * 180.02562 * 13 12 11 16 16 C 1.38178 * 119.97187 * 0.02562 * 15 13 12 17 17 C 1.38262 * 120.02585 * 359.97438 * 16 15 13 18 18 C 1.38221 * 120.01219 * 350.06634 * 12 11 10 19 19 C 1.53789 * 113.61414 * 180.02562 * 11 10 8 20 20 C 1.53784 * 87.07901 * 270.88173 * 19 11 10 21 21 H 1.08991 * 113.61411 * 219.93310 * 20 19 11 22 22 O 1.42901 * 113.61398 * 89.11486 * 20 19 11 23 23 C 1.53778 * 113.61712 * 82.50661 * 11 10 8 24 24 N 1.40072 * 108.13409 * 0.42745 * 6 5 4 25 25 C 1.31614 * 108.11178 * 359.73414 * 24 6 5 26 26 C 1.48424 * 126.04393 * 180.02562 * 25 24 6 27 27 C 1.39316 * 120.12243 * 144.72724 * 26 25 24 28 28 C 1.38030 * 119.87698 * 179.72213 * 27 26 25 29 29 C 1.38319 * 120.12001 * 0.55733 * 28 27 26 30 30 C 1.38324 * 120.23901 * 359.71761 * 29 28 27 31 31 C 1.38025 * 120.12180 * 0.02562 * 30 29 28 32 32 H 0.96698 * 113.99898 * 299.99797 * 1 2 3 33 33 H 1.09002 * 109.47259 * 239.99966 * 2 1 3 34 34 H 1.48504 * 109.99730 * 299.99986 * 3 2 1 35 35 H 1.48495 * 110.00156 * 61.31576 * 3 2 1 36 36 H 1.08006 * 126.00885 * 359.97438 * 5 4 2 37 37 H 1.09006 * 109.47438 * 245.30815 * 7 6 5 38 38 H 1.09006 * 109.47363 * 5.30938 * 7 6 5 39 39 H 0.97001 * 119.99824 * 0.02562 * 10 8 7 40 40 H 1.08004 * 120.01803 * 179.97438 * 15 13 12 41 41 H 1.08002 * 119.98650 * 179.97438 * 16 15 13 42 42 H 1.07999 * 119.97392 * 180.02562 * 17 16 15 43 43 H 1.08002 * 119.98905 * 359.97438 * 18 12 11 44 44 H 1.09000 * 113.61175 * 25.43049 * 19 11 10 45 45 H 1.08990 * 113.61258 * 156.24836 * 19 11 10 46 46 H 0.96703 * 114.00293 * 179.97438 * 22 20 19 47 47 H 1.08992 * 113.61482 * 203.66829 * 23 11 10 48 48 H 1.09006 * 113.61031 * 334.56705 * 23 11 10 49 49 H 1.07995 * 120.06163 * 0.02562 * 27 26 25 50 50 H 1.07999 * 119.94087 * 180.29326 * 28 27 26 51 51 H 1.07993 * 119.88088 * 179.70220 * 29 28 27 52 52 H 1.07995 * 119.93559 * 179.97438 * 30 29 28 53 53 H 1.07996 * 120.06002 * 179.97438 * 31 30 29 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4683 -0.1253 2.3233 6 7 2.7884 -1.0988 3.2026 7 6 3.3939 -0.9008 4.5217 8 6 2.5403 -1.5648 5.5712 9 8 1.5261 -2.1467 5.2489 10 7 2.9043 -1.5129 6.8678 11 6 2.0747 -2.1590 7.8879 12 6 0.6147 -1.8061 7.7644 13 6 -0.3275 -2.4835 8.5191 14 9 0.0609 -3.4616 9.3664 15 6 -1.6688 -2.1587 8.4043 16 6 -2.0651 -1.1593 7.5363 17 6 -1.1231 -0.4834 6.7830 18 6 0.2166 -0.8023 6.9017 19 6 2.6257 -2.0087 9.3159 20 6 3.4161 -3.3033 9.0627 21 1 3.4439 -3.9731 9.9221 22 8 4.7061 -3.0834 8.4886 23 6 2.3359 -3.6677 8.0297 24 7 2.4470 -2.3315 2.6316 25 6 1.9301 -2.1027 1.4431 26 6 1.4330 -3.1303 0.4944 27 6 0.3270 -2.8629 -0.3095 28 6 -0.1275 -3.8201 -1.1941 29 6 0.5059 -5.0470 -1.2750 30 6 1.6009 -5.3198 -0.4751 31 6 2.0670 -4.3680 0.4092 32 1 -0.3933 0.4417 0.7651 33 1 1.7923 -0.5138 -0.8900 34 1 1.5613 2.4679 -1.2085 35 1 1.5878 2.4586 1.2241 36 1 2.6137 0.9350 2.4691 37 1 4.3914 -1.3401 4.5333 38 1 3.4645 0.1664 4.7326 39 1 3.7156 -1.0479 7.1256 40 1 -2.4049 -2.6868 8.9923 41 1 -3.1111 -0.9060 7.4462 42 1 -1.4337 0.2979 6.1051 43 1 0.9521 -0.2705 6.3163 44 1 3.2573 -1.1306 9.4499 45 1 1.8644 -2.1047 10.0899 46 1 5.2083 -3.8939 8.3273 47 1 1.4957 -4.2185 8.4523 48 1 2.7338 -4.1288 7.1256 49 1 -0.1708 -1.9068 -0.2442 50 1 -0.9819 -3.6122 -1.8212 51 1 0.1441 -5.7948 -1.9651 52 1 2.0915 -6.2796 -0.5420 53 1 2.9217 -4.5822 1.0336 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_12622748.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:55:43 Heat of formation + Delta-G solvation = 38.245554 kcal Electronic energy + Delta-G solvation = -42323.513835 eV Core-core repulsion = 37045.333646 eV Total energy + Delta-G solvation = -5278.180190 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.163 amu Computer time = 2.21 seconds Orbital eigenvalues (eV) -50.18257 -42.55982 -42.00134 -39.94626 -39.54440 -39.44870 -37.88151 -36.27465 -34.82419 -34.00070 -32.35860 -32.07905 -31.81395 -31.39635 -31.38566 -28.80363 -27.06452 -26.23912 -25.67073 -24.28188 -23.72006 -23.49251 -22.92289 -21.92400 -21.45677 -20.96814 -20.68711 -18.93181 -18.81724 -18.38309 -18.13645 -17.79334 -17.68598 -17.19265 -17.10292 -16.81437 -16.65477 -16.56645 -16.33695 -16.07222 -15.86502 -15.68259 -15.48643 -15.34105 -15.17550 -14.90656 -14.76382 -14.49014 -14.43284 -14.24791 -14.10773 -13.87088 -13.80997 -13.67561 -13.65649 -13.51263 -13.28557 -12.97545 -12.56037 -12.54061 -12.39688 -12.37844 -12.14761 -11.97624 -11.69417 -11.66459 -11.59988 -11.27301 -10.87955 -10.66817 -10.39767 -10.23738 -9.87727 -9.86144 -9.74835 -9.64375 -9.28067 -4.83085 0.07246 0.07856 0.19013 0.47084 0.82137 1.27710 1.42563 1.45460 1.65510 1.72250 1.97845 2.05648 2.50836 2.90095 2.98951 3.17083 3.31059 3.34361 3.40563 3.46759 3.50284 3.62916 3.69798 3.72631 3.82717 3.92335 3.99204 4.02633 4.12446 4.12628 4.18389 4.23271 4.27925 4.33529 4.36101 4.46709 4.52596 4.57490 4.61496 4.67124 4.78256 4.80361 4.81058 4.85046 4.87277 4.88144 4.95745 5.00381 5.03262 5.17238 5.24907 5.31886 5.37542 5.50662 5.57011 5.61496 5.64557 5.83789 5.91736 6.05536 6.43615 6.58268 6.63177 6.76581 7.15086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.051 4.051 3 Si 0.782 3.218 4 C -0.260 4.260 5 C 0.074 3.926 6 N -0.355 5.355 7 C 0.111 3.889 8 C 0.492 3.508 9 O -0.540 6.540 10 N -0.684 5.684 11 C 0.200 3.800 12 C -0.113 4.113 13 C 0.083 3.917 14 F -0.138 7.138 15 C -0.164 4.164 16 C -0.096 4.096 17 C -0.140 4.140 18 C -0.065 4.065 19 C -0.119 4.119 20 C 0.095 3.905 21 H 0.086 0.914 22 O -0.556 6.556 23 C -0.190 4.190 24 N -0.290 5.290 25 C 0.110 3.890 26 C -0.035 4.035 27 C -0.113 4.113 28 C -0.132 4.132 29 C -0.117 4.117 30 C -0.131 4.131 31 C -0.110 4.110 32 H 0.383 0.617 33 H 0.104 0.896 34 H -0.306 1.306 35 H -0.261 1.261 36 H 0.218 0.782 37 H 0.140 0.860 38 H 0.177 0.823 39 H 0.423 0.577 40 H 0.149 0.851 41 H 0.153 0.847 42 H 0.140 0.860 43 H 0.125 0.875 44 H 0.101 0.899 45 H 0.110 0.890 46 H 0.398 0.602 47 H 0.103 0.897 48 H 0.057 0.943 49 H 0.152 0.848 50 H 0.140 0.860 51 H 0.145 0.855 52 H 0.141 0.859 53 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.542 5.762 3.235 8.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.159 4.159 3 Si 0.684 3.316 4 C -0.271 4.271 5 C -0.071 4.071 6 N -0.137 5.137 7 C -0.013 4.013 8 C 0.277 3.723 9 O -0.415 6.415 10 N -0.339 5.339 11 C 0.112 3.888 12 C -0.115 4.115 13 C 0.064 3.936 14 F -0.116 7.116 15 C -0.183 4.183 16 C -0.114 4.114 17 C -0.158 4.158 18 C -0.083 4.083 19 C -0.156 4.156 20 C 0.036 3.964 21 H 0.104 0.896 22 O -0.364 6.364 23 C -0.228 4.228 24 N -0.112 5.112 25 C -0.056 4.056 26 C -0.037 4.037 27 C -0.132 4.132 28 C -0.150 4.150 29 C -0.136 4.136 30 C -0.149 4.149 31 C -0.129 4.129 32 H 0.233 0.767 33 H 0.122 0.878 34 H -0.234 1.234 35 H -0.186 1.186 36 H 0.234 0.766 37 H 0.157 0.843 38 H 0.194 0.806 39 H 0.262 0.738 40 H 0.167 0.833 41 H 0.171 0.829 42 H 0.158 0.842 43 H 0.143 0.857 44 H 0.120 0.880 45 H 0.128 0.872 46 H 0.249 0.751 47 H 0.121 0.879 48 H 0.076 0.924 49 H 0.169 0.831 50 H 0.158 0.842 51 H 0.163 0.837 52 H 0.159 0.841 53 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 4.967 5.601 3.584 8.300 hybrid contribution -0.981 -0.794 0.053 1.263 sum 3.986 4.807 3.637 7.227 Atomic orbital electron populations 1.86456 1.19140 1.79734 1.50074 1.24607 0.82793 1.12117 0.96393 0.94055 0.89826 0.70302 0.77388 1.20524 1.13966 0.92258 1.00380 1.22818 0.98358 0.96682 0.89222 1.48053 1.48034 1.03650 1.13916 1.21941 0.96891 1.06195 0.76294 1.21033 0.86327 0.81045 0.83890 1.90898 1.26607 1.42842 1.81160 1.45354 1.27646 1.56407 1.04473 1.19783 0.85818 0.93527 0.89656 1.19804 0.94982 0.98010 0.98703 1.17552 0.93462 0.89556 0.93050 1.91356 1.91369 1.60108 1.68796 1.21378 0.94048 1.00658 1.02203 1.21316 1.01189 0.94394 0.94455 1.21462 0.93000 1.01140 1.00198 1.20911 0.96567 0.95527 0.95344 1.23404 0.99177 0.99327 0.93713 1.22544 0.82535 0.97024 0.94338 0.89583 1.86315 1.27790 1.37731 1.84551 1.24424 1.01662 0.95937 1.00803 1.77711 1.20404 1.04158 1.08908 1.20826 0.98797 0.93629 0.92299 1.18032 0.96949 0.92544 0.96156 1.21996 0.95213 1.01353 0.94616 1.21413 1.00787 0.93738 0.99028 1.21580 0.95461 0.97430 0.99103 1.21349 0.97490 0.99790 0.96287 1.21310 1.00039 0.92916 0.98620 0.76718 0.87772 1.23361 1.18635 0.76588 0.84263 0.80586 0.73815 0.83331 0.82904 0.84181 0.85729 0.88028 0.87188 0.75136 0.87904 0.92422 0.83051 0.84196 0.83747 0.84084 0.86496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.78 10.10 -148.98 -1.50 -3.29 16 2 C -0.05 -0.06 2.00 71.24 0.14 0.09 16 3 Si 0.78 -3.20 30.80 68.60 2.11 -1.08 16 4 C -0.26 -0.93 5.34 -19.95 -0.11 -1.04 16 5 C 0.07 -0.12 9.96 83.47 0.83 0.71 16 6 N -0.36 -0.73 3.40 -351.92 -1.20 -1.93 16 7 C 0.11 -0.68 6.98 85.64 0.60 -0.08 16 8 C 0.49 0.64 5.79 87.66 0.51 1.14 16 9 O -0.54 -6.54 12.91 -3.05 -0.04 -6.58 16 10 N -0.68 1.81 4.41 -423.91 -1.87 -0.06 16 11 C 0.20 0.32 1.06 3.39 0.00 0.32 16 12 C -0.11 -0.65 4.56 -19.82 -0.09 -0.74 16 13 C 0.08 0.56 6.71 22.37 0.15 0.71 16 14 F -0.14 -0.87 12.93 44.97 0.58 -0.29 16 15 C -0.16 -0.76 10.03 22.31 0.22 -0.54 16 16 C -0.10 -0.28 10.04 22.26 0.22 -0.06 16 17 C -0.14 -0.54 10.04 22.27 0.22 -0.32 16 18 C -0.07 -0.34 7.39 22.26 0.16 -0.17 16 19 C -0.12 0.26 6.87 31.12 0.21 0.47 16 20 C 0.10 -0.21 5.28 31.14 0.16 -0.05 16 21 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 22 O -0.56 2.29 12.91 -148.98 -1.92 0.37 16 23 C -0.19 -0.66 6.92 31.14 0.22 -0.44 16 24 N -0.29 -3.34 11.63 -48.16 -0.56 -3.90 16 25 C 0.11 1.16 6.74 42.53 0.29 1.45 16 26 C -0.03 -0.41 5.80 -20.04 -0.12 -0.52 16 27 C -0.11 -1.12 8.95 22.48 0.20 -0.92 16 28 C -0.13 -0.93 10.03 22.24 0.22 -0.71 16 29 C -0.12 -0.66 10.04 22.31 0.22 -0.44 16 30 C -0.13 -0.92 10.03 22.24 0.22 -0.70 16 31 C -0.11 -1.16 9.75 22.48 0.22 -0.94 16 32 H 0.38 -0.83 8.70 -74.06 -0.64 -1.47 16 33 H 0.10 0.28 7.84 -2.39 -0.02 0.26 16 34 H -0.31 -1.34 7.11 99.48 0.71 -0.63 16 35 H -0.26 1.00 7.00 99.48 0.70 1.70 16 36 H 0.22 -2.35 6.32 -2.91 -0.02 -2.37 16 37 H 0.14 -1.37 8.14 -2.38 -0.02 -1.39 16 38 H 0.18 -2.91 8.07 -2.38 -0.02 -2.93 16 39 H 0.42 -3.58 8.42 -92.71 -0.78 -4.36 16 40 H 0.15 0.15 8.06 -2.91 -0.02 0.13 16 41 H 0.15 -0.33 8.06 -2.91 -0.02 -0.35 16 42 H 0.14 0.00 8.06 -2.91 -0.02 -0.03 16 43 H 0.12 0.36 5.58 -2.91 -0.02 0.34 16 44 H 0.10 -0.50 8.12 -2.39 -0.02 -0.52 16 45 H 0.11 -0.18 6.93 -2.39 -0.02 -0.19 16 46 H 0.40 -3.92 9.12 -74.06 -0.68 -4.59 16 47 H 0.10 0.61 5.22 -2.39 -0.01 0.59 16 48 H 0.06 0.44 8.14 -2.38 -0.02 0.42 16 49 H 0.15 1.43 4.52 -2.91 -0.01 1.42 16 50 H 0.14 0.40 8.06 -2.91 -0.02 0.38 16 51 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 52 H 0.14 0.34 8.06 -2.91 -0.02 0.31 16 53 H 0.12 1.23 8.06 -2.91 -0.02 1.21 16 Total: 0.00 -31.24 433.21 -0.73 -31.97 By element: Atomic # 1 Polarization: -11.36 SS G_CDS: -1.05 Total: -12.41 kcal Atomic # 6 Polarization: -7.52 SS G_CDS: 4.73 Total: -2.79 kcal Atomic # 7 Polarization: -2.26 SS G_CDS: -3.63 Total: -5.89 kcal Atomic # 8 Polarization: -6.03 SS G_CDS: -3.47 Total: -9.50 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.58 Total: -0.29 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.11 Total: -1.08 kcal Total: -31.24 -0.73 -31.97 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_12622748.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.212 kcal (2) G-P(sol) polarization free energy of solvation -31.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.972 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.967 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.21 seconds