Wall clock time and date at job start Sun Mar 7 2021 11:57:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37869 * 126.45287 * 2 1 4 4 C 1.46673 * 126.23689 * 0.02562 * 3 2 1 5 5 O 1.21693 * 119.99913 * 359.97438 * 4 3 2 6 6 N 1.34775 * 120.00197 * 179.97438 * 4 3 2 7 7 C 1.46501 * 120.00381 * 179.97438 * 6 4 3 8 8 C 1.50700 * 112.84606 * 48.80302 * 7 6 4 9 9 C 1.38441 * 120.00640 * 189.39179 * 8 7 6 10 10 F 1.35094 * 120.02942 * 0.02562 * 9 8 7 11 11 C 1.38484 * 119.94080 * 179.72725 * 9 8 7 12 12 C 1.38175 * 119.97857 * 0.56957 * 11 9 8 13 13 C 1.38271 * 120.02288 * 359.71023 * 12 11 9 14 14 C 1.38216 * 120.01323 * 9.66800 * 8 7 6 15 15 C 1.53784 * 113.61145 * 277.49856 * 7 6 4 16 16 C 1.53784 * 87.08238 * 270.88007 * 15 7 6 17 17 H 1.09000 * 113.69060 * 220.01094 * 16 15 7 18 18 O 1.42898 * 113.61088 * 89.11910 * 16 15 7 19 19 C 1.53776 * 113.61420 * 180.02562 * 7 6 4 20 20 N 1.37660 * 107.53134 * 179.97438 * 3 2 1 21 21 C 1.35539 * 108.64179 * 359.77509 * 20 3 2 22 22 C 1.50698 * 125.56469 * 180.23190 * 21 20 3 23 23 O 1.42897 * 109.47133 * 65.18819 * 22 21 20 24 24 Si 1.86297 * 109.47200 * 185.18957 * 22 21 20 25 25 C 1.35452 * 108.87225 * 0.37374 * 21 20 3 26 26 H 1.09000 * 109.47405 * 270.02271 * 1 2 3 27 27 H 1.08999 * 109.47485 * 30.02829 * 1 2 3 28 28 H 1.09009 * 109.47150 * 150.02213 * 1 2 3 29 29 H 0.97002 * 120.00165 * 359.97438 * 6 4 3 30 30 H 1.08006 * 120.01242 * 180.29817 * 11 9 8 31 31 H 1.07999 * 119.99282 * 179.72196 * 12 11 9 32 32 H 1.07998 * 119.97266 * 180.02562 * 13 12 11 33 33 H 1.07998 * 119.99047 * 359.97438 * 14 8 7 34 34 H 1.08992 * 113.61715 * 25.43270 * 15 7 6 35 35 H 1.09003 * 113.61221 * 156.33493 * 15 7 6 36 36 H 0.96698 * 113.99990 * 82.50557 * 18 16 15 37 37 H 1.09002 * 113.61345 * 203.66353 * 19 7 6 38 38 H 1.08998 * 113.61928 * 334.48286 * 19 7 6 39 39 H 0.96992 * 125.67637 * 180.02562 * 20 3 2 40 40 H 1.09002 * 109.46809 * 305.19235 * 22 21 20 41 41 H 0.96694 * 114.00134 * 180.02562 * 23 22 21 42 42 H 1.48500 * 110.00179 * 178.68039 * 24 22 21 43 43 H 1.48500 * 110.00051 * 299.99759 * 24 22 21 44 44 H 1.08002 * 126.07027 * 179.89697 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8897 2.5092 0.0005 5 8 0.7025 2.7765 0.0006 6 7 2.8035 3.4999 0.0010 7 6 2.3677 4.8986 0.0009 8 6 1.3199 5.1850 1.0455 9 6 0.6626 6.4034 1.0511 10 9 0.9597 7.3360 0.1200 11 6 -0.3040 6.6630 2.0082 12 6 -0.6031 5.7105 2.9635 13 6 0.0582 4.4961 2.9604 14 6 1.0188 4.2335 2.0018 15 6 2.0094 5.4321 -1.3962 16 6 3.4866 5.8369 -1.5342 17 1 3.6327 6.8022 -2.0190 18 8 4.3127 4.8089 -2.0844 19 6 3.5296 5.9059 0.0009 20 7 3.6284 0.6625 0.0006 21 6 3.6218 -0.6928 0.0060 22 6 4.8433 -1.5753 0.0133 23 8 5.5567 -1.3910 1.2377 24 14 4.3229 -3.3575 -0.1400 25 6 2.3379 -1.1247 0.0005 26 1 -0.3634 0.0004 1.0276 27 1 -0.3634 0.8897 -0.5143 28 1 -0.3634 -0.8903 -0.5135 29 1 3.7499 3.2869 0.0013 30 1 -0.8209 7.6113 2.0106 31 1 -1.3537 5.9144 3.7127 32 1 -0.1765 3.7521 3.7071 33 1 1.5343 3.2845 2.0001 34 1 1.7027 4.6541 -2.0952 35 1 1.3243 6.2797 -1.3774 36 1 4.2898 4.7606 -3.0499 37 1 3.2603 6.8831 0.4017 38 1 4.4499 5.5110 0.4311 39 1 4.4190 1.2244 0.0011 40 1 5.4873 -1.3112 -0.8256 41 1 6.3568 -1.9289 1.3116 42 1 5.5201 -4.2358 -0.1660 43 1 3.4445 -3.7298 0.9979 44 1 2.0136 -2.1549 0.0013 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_13940406.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:57:17 Heat of formation + Delta-G solvation = -37.760009 kcal Electronic energy + Delta-G solvation = -31758.738435 eV Core-core repulsion = 27366.668107 eV Total energy + Delta-G solvation = -4392.070328 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.137 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -50.13852 -42.73970 -41.79266 -39.48770 -39.39716 -37.84040 -36.32617 -34.38565 -33.38984 -32.17583 -31.52510 -31.35663 -28.24188 -27.22307 -27.06577 -25.67944 -23.79222 -23.22884 -22.31140 -21.57472 -20.66926 -20.42914 -19.50935 -18.79076 -18.63759 -18.21719 -17.64575 -17.14279 -16.91064 -16.79730 -16.65921 -16.42948 -15.97070 -15.66053 -15.33003 -15.14509 -15.11691 -14.85476 -14.64618 -14.24421 -14.20909 -13.97541 -13.87101 -13.66106 -13.61190 -13.48070 -13.31785 -13.13104 -12.98706 -12.53393 -12.46807 -12.39696 -11.99277 -11.95336 -11.68104 -11.15730 -10.87860 -10.63220 -10.31386 -9.85970 -9.82526 -9.62050 -9.20410 -4.85003 0.11170 0.19650 0.31631 1.20331 1.49635 1.64273 1.82884 1.97104 2.16290 2.21456 2.55236 2.98141 3.20302 3.24927 3.31067 3.41367 3.54267 3.70316 3.71880 3.77513 3.89851 4.03164 4.11518 4.13762 4.25016 4.31614 4.38441 4.40731 4.57184 4.64166 4.69689 4.75639 4.80409 4.82181 4.84359 4.87777 4.89092 5.00505 5.05939 5.15303 5.28576 5.32716 5.42083 5.49141 5.62984 5.83263 5.88054 6.26831 6.43133 6.52699 6.75474 7.05367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C -0.082 4.082 3 C -0.069 4.069 4 C 0.588 3.412 5 O -0.539 6.539 6 N -0.691 5.691 7 C 0.195 3.805 8 C -0.114 4.114 9 C 0.088 3.912 10 F -0.135 7.135 11 C -0.160 4.160 12 C -0.091 4.091 13 C -0.138 4.138 14 C -0.069 4.069 15 C -0.184 4.184 16 C 0.094 3.906 17 H 0.093 0.907 18 O -0.561 6.561 19 C -0.123 4.123 20 N -0.515 5.515 21 C 0.074 3.926 22 C -0.067 4.067 23 O -0.561 6.561 24 Si 0.788 3.212 25 C -0.210 4.210 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.081 0.919 29 H 0.409 0.591 30 H 0.154 0.846 31 H 0.157 0.843 32 H 0.139 0.861 33 H 0.113 0.887 34 H 0.063 0.937 35 H 0.111 0.889 36 H 0.399 0.601 37 H 0.116 0.884 38 H 0.092 0.908 39 H 0.426 0.574 40 H 0.104 0.896 41 H 0.401 0.599 42 H -0.278 1.278 43 H -0.298 1.298 44 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.209 -0.849 -2.380 4.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.091 4.091 3 C -0.182 4.182 4 C 0.377 3.623 5 O -0.417 6.417 6 N -0.342 5.342 7 C 0.108 3.892 8 C -0.116 4.116 9 C 0.069 3.931 10 F -0.114 7.114 11 C -0.178 4.178 12 C -0.109 4.109 13 C -0.157 4.157 14 C -0.088 4.088 15 C -0.223 4.223 16 C 0.035 3.965 17 H 0.110 0.890 18 O -0.369 6.369 19 C -0.160 4.160 20 N -0.112 5.112 21 C -0.045 4.045 22 C -0.176 4.176 23 O -0.372 6.372 24 Si 0.691 3.309 25 C -0.234 4.234 26 H 0.083 0.917 27 H 0.082 0.918 28 H 0.100 0.900 29 H 0.246 0.754 30 H 0.171 0.829 31 H 0.175 0.825 32 H 0.157 0.843 33 H 0.131 0.869 34 H 0.082 0.918 35 H 0.129 0.871 36 H 0.249 0.751 37 H 0.134 0.866 38 H 0.110 0.890 39 H 0.265 0.735 40 H 0.122 0.878 41 H 0.252 0.748 42 H -0.205 1.205 43 H -0.225 1.225 44 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 3.187 -0.942 -1.343 3.584 hybrid contribution 1.577 0.514 0.037 1.659 sum 4.764 -0.428 -1.305 4.958 Atomic orbital electron populations 1.20324 0.88899 1.03085 1.02179 1.20119 0.96352 0.90963 1.01686 1.20138 0.84323 0.93057 1.20655 1.17080 0.85775 0.83335 0.76110 1.90879 1.16929 1.83298 1.50567 1.45338 1.09663 1.03978 1.75234 1.19890 0.93960 0.81774 0.93605 1.19737 1.00062 0.93586 0.98228 1.17470 0.98809 0.86674 0.90187 1.91358 1.92451 1.64285 1.63312 1.21391 0.98384 1.02425 0.95632 1.21330 0.99142 0.92374 0.98064 1.21451 0.96744 0.98183 0.99280 1.20882 0.97207 0.97412 0.93252 1.24414 0.99848 1.02370 0.95658 1.22559 0.88232 0.91378 0.94339 0.88971 1.86321 1.67261 1.55605 1.27710 1.23444 0.97321 0.99429 0.95827 1.41835 1.06962 1.06694 1.55735 1.20149 0.95645 0.82762 1.05942 1.24767 0.92875 1.10192 0.89719 1.86533 1.43444 1.68977 1.38229 0.93412 0.80019 0.70056 0.87393 1.20776 0.90854 0.99557 1.12194 0.91705 0.91787 0.90039 0.75386 0.82872 0.82534 0.84289 0.86930 0.91815 0.87057 0.75065 0.86596 0.88970 0.73513 0.87798 0.74788 1.20476 1.22513 0.81951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.54 9.83 71.24 0.70 0.16 16 2 C -0.08 -0.57 6.21 -19.56 -0.12 -0.69 16 3 C -0.07 -0.42 7.06 40.34 0.28 -0.14 16 4 C 0.59 4.60 5.71 86.45 0.49 5.09 16 5 O -0.54 -7.34 11.99 -4.33 -0.05 -7.39 16 6 N -0.69 -2.17 4.41 -427.85 -1.89 -4.06 16 7 C 0.20 0.78 1.07 3.38 0.00 0.78 16 8 C -0.11 -0.83 4.57 -19.82 -0.09 -0.92 16 9 C 0.09 0.56 6.71 22.38 0.15 0.71 16 10 F -0.14 -0.72 12.93 44.97 0.58 -0.14 16 11 C -0.16 -0.61 10.03 22.31 0.22 -0.39 16 12 C -0.09 -0.25 10.04 22.26 0.22 -0.03 16 13 C -0.14 -0.73 10.04 22.27 0.22 -0.51 16 14 C -0.07 -0.56 7.38 22.26 0.16 -0.40 16 15 C -0.18 -0.64 6.92 31.12 0.22 -0.42 16 16 C 0.09 -0.13 5.28 31.10 0.16 0.03 16 17 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 18 O -0.56 1.37 12.91 -148.98 -1.92 -0.56 16 19 C -0.12 0.02 6.87 31.10 0.21 0.23 16 20 N -0.52 -0.73 5.99 -171.93 -1.03 -1.76 16 21 C 0.07 0.12 6.50 41.34 0.27 0.39 16 22 C -0.07 0.22 3.07 71.24 0.22 0.44 16 23 O -0.56 0.56 12.86 -148.98 -1.92 -1.36 16 24 Si 0.79 -3.17 30.56 68.60 2.10 -1.08 16 25 C -0.21 -0.73 9.27 22.01 0.20 -0.53 16 26 H 0.06 0.40 8.14 -2.39 -0.02 0.38 16 27 H 0.06 0.63 6.49 -2.39 -0.02 0.61 16 28 H 0.08 0.17 8.14 -2.38 -0.02 0.15 16 29 H 0.41 -0.25 7.55 -92.71 -0.70 -0.95 16 30 H 0.15 -0.07 8.06 -2.91 -0.02 -0.09 16 31 H 0.16 -0.45 8.06 -2.91 -0.02 -0.47 16 32 H 0.14 0.27 8.06 -2.91 -0.02 0.24 16 33 H 0.11 1.05 5.55 -2.91 -0.02 1.04 16 34 H 0.06 0.42 8.14 -2.39 -0.02 0.40 16 35 H 0.11 0.50 5.25 -2.39 -0.01 0.48 16 36 H 0.40 -3.54 9.12 -74.06 -0.68 -4.21 16 37 H 0.12 -0.07 6.91 -2.39 -0.02 -0.09 16 38 H 0.09 -0.13 8.12 -2.39 -0.02 -0.15 16 39 H 0.43 -1.34 8.19 -92.71 -0.76 -2.10 16 40 H 0.10 -0.87 7.96 -2.39 -0.02 -0.88 16 41 H 0.40 -3.67 8.74 -74.06 -0.65 -4.32 16 42 H -0.28 0.23 7.11 99.48 0.71 0.94 16 43 H -0.30 -1.22 7.11 99.48 0.71 -0.51 16 44 H 0.16 -0.04 6.19 -2.91 -0.02 -0.06 16 Total: 0.00 -20.30 359.21 -2.22 -22.52 By element: Atomic # 1 Polarization: -8.37 SS G_CDS: -1.63 Total: -10.00 kcal Atomic # 6 Polarization: 0.29 SS G_CDS: 3.54 Total: 3.83 kcal Atomic # 7 Polarization: -2.90 SS G_CDS: -2.92 Total: -5.82 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -3.89 Total: -9.31 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.58 Total: -0.14 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: 2.10 Total: -1.08 kcal Total: -20.30 -2.22 -22.52 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_13940406.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.236 kcal (2) G-P(sol) polarization free energy of solvation -20.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.536 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.524 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds