Wall clock time and date at job start Sun Mar 7 2021 11:57:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.46911 * 2 1 4 4 C 1.50702 * 109.47407 * 240.00398 * 2 1 3 5 5 C 1.38271 * 119.93932 * 299.99985 * 4 2 1 6 6 C 1.38145 * 120.05403 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94416 * 359.97438 * 6 5 4 8 8 O 1.35899 * 120.05316 * 180.02562 * 7 6 5 9 9 C 1.42902 * 116.99732 * 180.02562 * 8 7 6 10 10 C 1.53004 * 109.47178 * 180.02562 * 9 8 7 11 11 C 1.50700 * 109.47208 * 179.97438 * 10 9 8 12 12 O 1.21283 * 119.99803 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99675 * 180.27843 * 11 10 9 14 14 C 1.46497 * 119.99525 * 179.72583 * 13 11 10 15 15 C 1.50702 * 112.85273 * 48.80095 * 14 13 11 16 16 C 1.38440 * 120.01596 * 189.38661 * 15 14 13 17 17 F 1.35097 * 120.02361 * 0.02562 * 16 15 14 18 18 C 1.38479 * 119.94805 * 179.72892 * 16 15 14 19 19 C 1.38171 * 119.97494 * 0.56866 * 18 16 15 20 20 C 1.38270 * 120.02764 * 359.70726 * 19 18 16 21 21 C 1.38222 * 120.00951 * 9.66660 * 15 14 13 22 22 C 1.53776 * 113.61563 * 277.49430 * 14 13 11 23 23 C 1.53780 * 87.08288 * 270.88560 * 22 14 13 24 24 H 1.09004 * 113.61671 * 220.01902 * 23 22 14 25 25 O 1.42894 * 113.61636 * 89.11316 * 23 22 14 26 26 C 1.53781 * 87.08006 * 334.56577 * 23 22 14 27 27 C 1.38729 * 119.88881 * 0.28065 * 7 6 5 28 28 C 1.38150 * 119.94491 * 359.42334 * 27 7 6 29 29 H 0.96700 * 113.99808 * 299.99705 * 1 2 3 30 30 H 1.08999 * 109.47778 * 119.99785 * 2 1 3 31 31 H 1.48502 * 109.99965 * 178.68467 * 3 2 1 32 32 H 1.48497 * 110.00224 * 299.99884 * 3 2 1 33 33 H 1.08003 * 119.96861 * 0.02562 * 5 4 2 34 34 H 1.07999 * 120.02508 * 180.02562 * 6 5 4 35 35 H 1.09000 * 109.47600 * 60.00051 * 9 8 7 36 36 H 1.08998 * 109.47515 * 300.00028 * 9 8 7 37 37 H 1.09009 * 109.46730 * 59.99802 * 10 9 8 38 38 H 1.08998 * 109.46846 * 300.00347 * 10 9 8 39 39 H 0.97000 * 119.99894 * 359.71837 * 13 11 10 40 40 H 1.08005 * 120.01073 * 180.29913 * 18 16 15 41 41 H 1.08003 * 119.98970 * 179.72450 * 19 18 16 42 42 H 1.07999 * 119.97780 * 180.02562 * 20 19 18 43 43 H 1.07999 * 119.98889 * 359.95529 * 21 15 14 44 44 H 1.09000 * 113.61774 * 25.43315 * 22 14 13 45 45 H 1.09000 * 113.61639 * 156.34055 * 22 14 13 46 46 H 0.96701 * 114.00282 * 82.50751 * 25 23 22 47 47 H 1.08998 * 113.61475 * 270.87863 * 26 23 22 48 48 H 1.09005 * 113.69189 * 139.99224 * 26 23 22 49 49 H 1.08000 * 120.03011 * 179.71639 * 27 7 6 50 50 H 1.07997 * 119.97546 * 180.32194 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0554 -2.6874 -2.5756 7 6 2.8522 -2.0140 -3.4901 8 8 3.3044 -2.6543 -4.6002 9 6 4.1204 -1.8989 -5.4977 10 6 4.5301 -2.7805 -6.6792 11 6 5.3902 -1.9837 -7.6260 12 8 5.6496 -0.8247 -7.3802 13 7 5.8661 -2.5573 -8.7490 14 6 6.6972 -1.7809 -9.6723 15 6 7.8123 -1.0432 -8.9769 16 6 8.5667 -0.1136 -9.6720 17 9 8.3035 0.1333 -10.9739 18 6 9.5874 0.5675 -9.0302 19 6 9.8594 0.3102 -7.7001 20 6 9.1090 -0.6227 -7.0084 21 6 8.0859 -1.2988 -7.6464 22 6 5.8871 -0.9044 -10.6419 23 6 5.8661 -2.1129 -11.5927 24 1 6.0014 -1.8463 -12.6409 25 8 4.7576 -2.9892 -11.3803 26 6 7.1598 -2.5780 -10.9035 27 6 3.1910 -0.6874 -3.2667 28 6 2.7247 -0.0367 -2.1408 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5138 0.8900 31 1 3.5345 1.7704 0.0320 32 1 1.5614 2.4680 -1.2085 33 1 0.9752 -2.5575 -0.7365 34 1 1.7933 -3.7213 -2.7454 35 1 5.0125 -1.5540 -4.9748 36 1 3.5588 -1.0395 -5.8637 37 1 3.6378 -3.1250 -7.2020 38 1 5.0916 -3.6401 -6.3136 39 1 5.6583 -3.4841 -8.9456 40 1 10.1734 1.2965 -9.5702 41 1 10.6582 0.8380 -7.2005 42 1 9.3220 -0.8229 -5.9687 43 1 7.5000 -2.0268 -7.1049 44 1 4.9026 -0.6295 -10.2634 45 1 6.4452 -0.0527 -11.0308 46 1 3.9410 -2.7021 -11.8114 47 1 8.0658 -2.1838 -11.3638 48 1 7.2042 -3.6541 -10.7355 49 1 3.8150 -0.1623 -3.9747 50 1 2.9838 0.9975 -1.9690 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_4549602.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:57:44 Heat of formation + Delta-G solvation = -90.308464 kcal Electronic energy + Delta-G solvation = -36022.756151 eV Core-core repulsion = 31091.387111 eV Total energy + Delta-G solvation = -4931.369040 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -50.04289 -42.15968 -41.23387 -39.85742 -39.40408 -38.97598 -37.21367 -36.34612 -34.17615 -33.24221 -32.11519 -31.88857 -31.40315 -31.30559 -27.06921 -26.86950 -26.03914 -25.25088 -23.77745 -23.48753 -22.76433 -22.02942 -21.48956 -20.65897 -19.53580 -18.83894 -18.37671 -18.30209 -17.86522 -17.65671 -17.46317 -17.21075 -16.92504 -16.78774 -16.63553 -16.58689 -16.07260 -15.77567 -15.55330 -15.48300 -15.29434 -14.85343 -14.69823 -14.65302 -14.50696 -14.30384 -13.92875 -13.82651 -13.79924 -13.71151 -13.58994 -13.47762 -13.04940 -12.85945 -12.80839 -12.51386 -12.36744 -12.34229 -11.93229 -11.90159 -11.83591 -11.71757 -11.69582 -11.06536 -10.86946 -10.29712 -10.21185 -9.99561 -9.76149 -9.54656 -9.13788 -4.95941 0.17976 0.29683 0.31795 0.36025 1.31210 1.47975 1.61435 1.65416 1.99936 2.37734 2.60304 2.67926 2.89667 3.27654 3.31375 3.41830 3.42880 3.48113 3.58044 3.69097 3.73889 3.77912 3.81927 3.85706 3.92558 4.01417 4.04353 4.20990 4.25195 4.29517 4.34622 4.37869 4.40480 4.45044 4.56567 4.57016 4.58518 4.62723 4.75077 4.77402 4.85335 4.85968 4.92786 4.96953 5.06630 5.10218 5.21999 5.30961 5.33001 5.46651 5.53767 5.54453 5.73837 5.92317 6.33425 6.38710 6.52585 6.64954 7.09742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.065 4.065 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.050 4.050 6 C -0.149 4.149 7 C 0.138 3.862 8 O -0.315 6.315 9 C 0.075 3.925 10 C -0.141 4.141 11 C 0.516 3.484 12 O -0.524 6.524 13 N -0.697 5.697 14 C 0.201 3.799 15 C -0.104 4.104 16 C 0.103 3.897 17 F -0.135 7.135 18 C -0.154 4.154 19 C -0.090 4.090 20 C -0.130 4.130 21 C -0.056 4.056 22 C -0.184 4.184 23 C 0.083 3.917 24 H 0.077 0.923 25 O -0.551 6.551 26 C -0.126 4.126 27 C -0.201 4.201 28 C -0.083 4.083 29 H 0.382 0.618 30 H 0.074 0.926 31 H -0.256 1.256 32 H -0.251 1.251 33 H 0.136 0.864 34 H 0.136 0.864 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.109 0.891 38 H 0.107 0.893 39 H 0.411 0.589 40 H 0.137 0.863 41 H 0.133 0.867 42 H 0.127 0.873 43 H 0.122 0.878 44 H 0.078 0.922 45 H 0.116 0.884 46 H 0.385 0.615 47 H 0.112 0.888 48 H 0.088 0.912 49 H 0.134 0.866 50 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.592 -1.324 1.355 1.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.068 4.068 6 C -0.167 4.167 7 C 0.092 3.908 8 O -0.228 6.228 9 C -0.001 4.001 10 C -0.181 4.181 11 C 0.303 3.697 12 O -0.400 6.400 13 N -0.349 5.349 14 C 0.113 3.887 15 C -0.106 4.106 16 C 0.083 3.917 17 F -0.113 7.113 18 C -0.173 4.173 19 C -0.108 4.108 20 C -0.148 4.148 21 C -0.074 4.074 22 C -0.222 4.222 23 C 0.023 3.977 24 H 0.095 0.905 25 O -0.357 6.357 26 C -0.164 4.164 27 C -0.219 4.219 28 C -0.101 4.101 29 H 0.229 0.771 30 H 0.092 0.908 31 H -0.181 1.181 32 H -0.176 1.176 33 H 0.153 0.847 34 H 0.154 0.846 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.127 0.873 38 H 0.125 0.875 39 H 0.248 0.752 40 H 0.154 0.846 41 H 0.150 0.850 42 H 0.145 0.855 43 H 0.140 0.860 44 H 0.097 0.903 45 H 0.134 0.866 46 H 0.233 0.767 47 H 0.130 0.870 48 H 0.106 0.894 49 H 0.151 0.849 50 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 1.751 -0.735 0.770 2.049 hybrid contribution -0.410 -0.329 -0.831 0.983 sum 1.340 -1.064 -0.060 1.712 Atomic orbital electron populations 1.86493 1.17341 1.81770 1.49654 1.24592 0.85580 1.10060 0.97383 0.95457 0.80651 0.78279 0.87470 1.19254 1.00843 0.94842 0.96472 1.20817 0.96518 0.93349 0.96074 1.20516 1.00784 1.01128 0.94311 1.18946 0.94163 0.90876 0.86773 1.85977 1.65117 1.40346 1.31399 1.22416 0.94685 0.93857 0.89141 1.21473 1.01504 0.99816 0.95306 1.20261 0.80024 0.87762 0.81684 1.90820 1.57666 1.16862 1.74656 1.45528 1.51856 1.15888 1.21665 1.19771 0.88885 0.92539 0.87477 1.19576 0.97131 0.98660 0.95206 1.17311 0.97641 0.98229 0.78493 1.91372 1.92759 1.93381 1.33831 1.21103 0.98456 1.01648 0.96045 1.21037 0.99238 0.97177 0.93387 1.21202 0.95982 0.97211 1.00435 1.20814 0.95367 0.98466 0.92732 1.24435 1.01984 0.98983 0.96808 1.22644 0.87395 0.89926 0.97702 0.90549 1.86374 1.21297 1.50272 1.77769 1.23450 0.97535 1.01532 0.93859 1.21201 1.05779 0.94572 1.00381 1.20656 0.97264 0.98530 0.93603 0.77095 0.90841 1.18068 1.17598 0.84663 0.84608 0.90951 0.90945 0.87289 0.87479 0.75221 0.84558 0.84953 0.85461 0.86042 0.90313 0.86590 0.76683 0.86951 0.89356 0.84860 0.86313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.41 12.74 -35.23 -0.45 -0.86 16 2 C -0.07 -0.04 2.81 36.01 0.10 0.06 16 3 Si 0.68 -0.16 29.78 -169.99 -5.06 -5.22 16 4 C -0.11 -0.36 5.42 -104.60 -0.57 -0.93 16 5 C -0.05 -0.13 9.60 -39.60 -0.38 -0.51 16 6 C -0.15 -0.40 9.99 -39.43 -0.39 -0.80 16 7 C 0.14 0.47 6.69 -39.22 -0.26 0.20 16 8 O -0.31 -0.81 10.14 -19.42 -0.20 -1.01 16 9 C 0.07 0.08 4.03 37.16 0.15 0.23 16 10 C -0.14 0.15 6.07 -27.88 -0.17 -0.01 16 11 C 0.52 0.43 5.76 -10.98 -0.06 0.37 16 12 O -0.52 -2.21 13.17 5.55 0.07 -2.13 16 13 N -0.70 0.27 4.42 -47.93 -0.21 0.06 16 14 C 0.20 0.15 1.07 -132.16 -0.14 0.01 16 15 C -0.10 -0.24 4.57 -104.55 -0.48 -0.72 16 16 C 0.10 0.24 6.71 -39.42 -0.26 -0.02 16 17 F -0.13 -0.28 12.93 2.25 0.03 -0.25 16 18 C -0.15 -0.23 10.03 -39.52 -0.40 -0.62 16 19 C -0.09 -0.08 10.04 -39.59 -0.40 -0.48 16 20 C -0.13 -0.18 10.04 -39.57 -0.40 -0.58 16 21 C -0.06 -0.12 7.39 -39.59 -0.29 -0.42 16 22 C -0.18 -0.15 6.92 -25.92 -0.18 -0.33 16 23 C 0.08 -0.07 5.28 -25.92 -0.14 -0.21 16 24 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 25 O -0.55 0.65 12.91 -35.23 -0.45 0.20 16 26 C -0.13 0.07 6.87 -25.92 -0.18 -0.10 16 27 C -0.20 -0.68 9.04 -39.43 -0.36 -1.04 16 28 C -0.08 -0.30 8.66 -39.61 -0.34 -0.65 16 29 H 0.38 -1.66 8.74 45.56 0.40 -1.26 16 30 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H -0.26 -0.56 7.11 56.52 0.40 -0.15 16 32 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 33 H 0.14 0.14 8.06 -52.48 -0.42 -0.29 16 34 H 0.14 0.14 8.06 -52.49 -0.42 -0.28 16 35 H 0.07 0.08 7.61 -51.93 -0.40 -0.31 16 36 H 0.07 0.12 7.63 -51.93 -0.40 -0.27 16 37 H 0.11 -0.23 8.14 -51.92 -0.42 -0.65 16 38 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.41 -0.87 8.42 -40.82 -0.34 -1.21 16 40 H 0.14 -0.04 8.06 -52.48 -0.42 -0.46 16 41 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 42 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 43 H 0.12 0.20 5.55 -52.49 -0.29 -0.10 16 44 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 45 H 0.12 0.16 5.25 -51.93 -0.27 -0.11 16 46 H 0.38 -1.66 9.12 45.56 0.42 -1.25 16 47 H 0.11 -0.08 6.91 -51.93 -0.36 -0.44 16 48 H 0.09 -0.10 8.12 -51.93 -0.42 -0.52 16 49 H 0.13 0.30 6.30 -52.49 -0.33 -0.03 16 50 H 0.12 0.37 4.87 -52.49 -0.26 0.11 16 LS Contribution 406.63 15.07 6.13 6.13 Total: 0.00 -9.39 406.63 -10.96 -20.35 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -5.67 Total: -10.71 kcal Atomic # 6 Polarization: -1.40 SS G_CDS: -5.15 Total: -6.55 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.21 Total: 0.06 kcal Atomic # 8 Polarization: -2.78 SS G_CDS: -1.03 Total: -3.80 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.03 Total: -0.25 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.06 Total: -5.22 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -9.39 -10.96 -20.35 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_4549602.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.960 kcal (2) G-P(sol) polarization free energy of solvation -9.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.959 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.349 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds